4YT8 - Sequence, Chains, Asymmetric and Biological Units

• Title: SEMET-LABELLED HMDII FROM METHANOCALDOCOCCUS JANNASCHII
• Keywords: ROSSMANN-LIKE FOLD, [FE]-HYDROGENASE PARALOG, METAL BINDING
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4YT8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	H(2)-FORMING METHYLENETETRAHYDROMETHANOPTERIN DEHYDROGENASE-RELATED PROTEIN MJ1338	A	344	2520	80
2	Protein	H(2)-FORMING METHYLENETETRAHYDROMETHANOPTERIN DEHYDROGENASE-RELATED PROTEIN MJ1338	B	344	2520	80
3	Ligand	H(2)-FORMING METHYLENETETRAHYDROMETHANOPTERIN DEHYDROGENASE-RELATED PROTEIN MJ1338	A	1	0	10
4	Water			224	0	224
total				913	5040	394

Proteins

Unit 1

ASP 10 ASN 11 MSE 12 LYS 13 VAL 14 SER 15 VAL 16 TYR 17 GLY 18 ALA 19 GLY 20 ASN 21 GLN 22 ASN 23 LEU 24 TYR 25 ILE 26 ASN 27 LYS 28 LEU 29 ASN 30 LEU 31 PRO 32 GLU 33 LYS 34 PHE 35 GLY 36 GLY 37 GLU 38 PRO 39 PRO 40 TYR 41 GLY 42 GLY 43 SER 44 ARG 45 MSE 46 ALA 47 ILE 48 GLU 49 PHE 50 ALA 51 GLU 52 ALA 53 GLY 54 HIS 55 ASP 56 VAL 57 VAL 58 LEU 59 ALA 60 GLU 61 PRO 62 ASN 63 LYS 64 ASN 65 ILE 66 MSE 67 SER 68 ASP 69 ASP 70 LEU 71 TRP 72 LYS 73 LYS 74 VAL 75 GLU 76 ASP 77 ALA 78 GLY 79 VAL 80 LYS 81 VAL 82 VAL 83 SER 84 ASP 85 ASP 86 VAL 87 GLU 88 ALA 89 ALA 90 LYS 91 HIS 92 GLY 93 GLU 94 ILE 95 HIS 96 VAL 97 LEU 98 PHE 99 THR 100 PRO 101 PHE 102 GLY 103 LYS 104 ALA 105 THR 106 PHE 107 ARG 108 ILE 109 ALA 110 LYS 111 THR 112 ILE 113 ILE 114 GLU 115 HIS 116 VAL 117 PRO 118 GLU 119 ASN 120 ALA 121 VAL 122 ILE 123 CYS 124 ASN 125 THR 126 CYS 127 THR 128 VAL 129 SER 130 PRO 131 VAL 132 VAL 133 LEU 134 TYR 135 TYR 136 SER 137 LEU 138 GLU 139 PRO 140 ILE 141 LEU 142 ARG 143 THR 144 LYS 145 ARG 146 LYS 147 ASP 148 VAL 149 GLY 150 ILE 151 SER 152 SER 153 MSE 154 HIS 155 PRO 156 ALA 157 ALA 158 VAL 159 PRO 160 GLY 161 THR 162 PRO 163 GLN 164 HIS 165 GLY 166 HIS 167 TYR 168 VAL 169 ILE 170 GLY 171 GLY 172 LYS 173 THR 174 THR 175 ASP 176 GLY 177 LYS 178 GLU 179 LEU 180 ALA 181 THR 182 GLU 183 GLU 184 GLN 185 ILE 186 LYS 187 LYS 188 ALA 189 VAL 190 GLU 191 LEU 192 ALA 193 LYS 194 SER 195 ALA 196 GLY 197 LYS 198 GLU 199 ALA 200 TYR 201 VAL 202 VAL 203 PRO 204 ALA 205 ASP 206 VAL 207 SER 208 SER 209 VAL 210 VAL 211 ALA 212 ASP 213 MSE 214 GLY 215 SER 216 LEU 217 VAL 218 THR 219 ALA 220 VAL 221 ALA 222 LEU 223 SER 224 GLY 225 VAL 226 LEU 227 ASP 228 TYR 229 TYR 230 THR 231 VAL 232 GLY 233 ARG 234 LYS 235 ILE 236 ILE 237 ASN 238 ALA 239 PRO 240 LYS 241 LYS 242 MSE 243 ILE 244 GLU 245 GLN 246 GLN 247 VAL 248 ILE 249 MSE 250 THR 251 LEU 252 GLN 253 THR 254 MSE 255 ALA 256 SER 257 LEU 258 VAL 259 GLU 260 THR 261 SER 262 GLY 263 ILE 264 GLU 265 GLY 266 MSE 267 VAL 268 LYS 269 ALA 270 LEU 271 ASN 272 PRO 273 GLU 274 LEU 275 LEU 276 ILE 277 ARG 278 SER 279 ALA 280 SER 281 SER 282 MSE 283 LYS 284 LEU 285 LEU 286 ASP 287 ARG 288 GLN 289 LYS 290 ASP 291 LEU 292 ASP 293 ALA 294 ALA 295 LEU 296 GLU 297 ILE 298 LEU 299 GLN 300 ASN 301 LEU 302 ASP 303 GLU 304 THR 305 LEU 306 LYS 307 ALA 308 GLU 309 VAL 310 GLU 311 LYS 312 ALA 313 GLU 314 ILE 315 LYS 316 PRO 317 THR 318 THR 319 LEU 320 VAL 321 ALA 322 ALA 323 GLN 324 SER 325 LEU 326 VAL 327 LYS 328 GLU 329 ILE 330 LYS 331 THR 332 LEU 333 ILE 334 GLY 335 GLY 336 ALA 337 ALA 338 ALA 339 GLU 340 GLY 341 ALA 342 ILE 343 LYS 344 ARG 345 SER 346 ALA 347 ARG 348 LYS 349 LEU 350 PHE 351 GLU 352 HIS 353

Unit 2

ASP 10 ASN 11 MSE 12 LYS 13 VAL 14 SER 15 VAL 16 TYR 17 GLY 18 ALA 19 GLY 20 ASN 21 GLN 22 ASN 23 LEU 24 TYR 25 ILE 26 ASN 27 LYS 28 LEU 29 ASN 30 LEU 31 PRO 32 GLU 33 LYS 34 PHE 35 GLY 36 GLY 37 GLU 38 PRO 39 PRO 40 TYR 41 GLY 42 GLY 43 SER 44 ARG 45 MSE 46 ALA 47 ILE 48 GLU 49 PHE 50 ALA 51 GLU 52 ALA 53 GLY 54 HIS 55 ASP 56 VAL 57 VAL 58 LEU 59 ALA 60 GLU 61 PRO 62 ASN 63 LYS 64 ASN 65 ILE 66 MSE 67 SER 68 ASP 69 ASP 70 LEU 71 TRP 72 LYS 73 LYS 74 VAL 75 GLU 76 ASP 77 ALA 78 GLY 79 VAL 80 LYS 81 VAL 82 VAL 83 SER 84 ASP 85 ASP 86 VAL 87 GLU 88 ALA 89 ALA 90 LYS 91 HIS 92 GLY 93 GLU 94 ILE 95 HIS 96 VAL 97 LEU 98 PHE 99 THR 100 PRO 101 PHE 102 GLY 103 LYS 104 ALA 105 THR 106 PHE 107 ARG 108 ILE 109 ALA 110 LYS 111 THR 112 ILE 113 ILE 114 GLU 115 HIS 116 VAL 117 PRO 118 GLU 119 ASN 120 ALA 121 VAL 122 ILE 123 CYS 124 ASN 125 THR 126 CYS 127 THR 128 VAL 129 SER 130 PRO 131 VAL 132 VAL 133 LEU 134 TYR 135 TYR 136 SER 137 LEU 138 GLU 139 PRO 140 ILE 141 LEU 142 ARG 143 THR 144 LYS 145 ARG 146 LYS 147 ASP 148 VAL 149 GLY 150 ILE 151 SER 152 SER 153 MSE 154 HIS 155 PRO 156 ALA 157 ALA 158 VAL 159 PRO 160 GLY 161 THR 162 PRO 163 GLN 164 HIS 165 GLY 166 HIS 167 TYR 168 VAL 169 ILE 170 GLY 171 GLY 172 LYS 173 THR 174 THR 175 ASP 176 GLY 177 LYS 178 GLU 179 LEU 180 ALA 181 THR 182 GLU 183 GLU 184 GLN 185 ILE 186 LYS 187 LYS 188 ALA 189 VAL 190 GLU 191 LEU 192 ALA 193 LYS 194 SER 195 ALA 196 GLY 197 LYS 198 GLU 199 ALA 200 TYR 201 VAL 202 VAL 203 PRO 204 ALA 205 ASP 206 VAL 207 SER 208 SER 209 VAL 210 VAL 211 ALA 212 ASP 213 MSE 214 GLY 215 SER 216 LEU 217 VAL 218 THR 219 ALA 220 VAL 221 ALA 222 LEU 223 SER 224 GLY 225 VAL 226 LEU 227 ASP 228 TYR 229 TYR 230 THR 231 VAL 232 GLY 233 ARG 234 LYS 235 ILE 236 ILE 237 ASN 238 ALA 239 PRO 240 LYS 241 LYS 242 MSE 243 ILE 244 GLU 245 GLN 246 GLN 247 VAL 248 ILE 249 MSE 250 THR 251 LEU 252 GLN 253 THR 254 MSE 255 ALA 256 SER 257 LEU 258 VAL 259 GLU 260 THR 261 SER 262 GLY 263 ILE 264 GLU 265 GLY 266 MSE 267 VAL 268 LYS 269 ALA 270 LEU 271 ASN 272 PRO 273 GLU 274 LEU 275 LEU 276 ILE 277 ARG 278 SER 279 ALA 280 SER 281 SER 282 MSE 283 LYS 284 LEU 285 LEU 286 ASP 287 ARG 288 GLN 289 LYS 290 ASP 291 LEU 292 ASP 293 ALA 294 ALA 295 LEU 296 GLU 297 ILE 298 LEU 299 GLN 300 ASN 301 LEU 302 ASP 303 GLU 304 THR 305 LEU 306 LYS 307 ALA 308 GLU 309 VAL 310 GLU 311 LYS 312 ALA 313 GLU 314 ILE 315 LYS 316 PRO 317 THR 318 THR 319 LEU 320 VAL 321 ALA 322 ALA 323 GLN 324 SER 325 LEU 326 VAL 327 LYS 328 GLU 329 ILE 330 LYS 331 THR 332 LEU 333 ILE 334 GLY 335 GLY 336 ALA 337 ALA 338 ALA 339 GLU 340 GLY 341 ALA 342 ILE 343 LYS 344 ARG 345 SER 346 ALA 347 ARG 348 LYS 349 LEU 350 PHE 351 GLU 352 HIS 353

Ligands

Unit 3

PGE 401