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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF LUXP IN COMPLEX WITH A FORMOSE DERIVED ANALOGUE
Keywords PROTEIN-LIGAND COMPLEX, QUORUM SENSING, PROTEIN BINDING
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4YP9     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AUTOINDUCER 2-BINDING PERIPLASMIC PROTEIN LUXP  A 337 2712 0
2  Protein   AUTOINDUCER 2-BINDING PERIPLASMIC PROTEIN LUXP  B 342 2755 0
3  Ligand   AUTOINDUCER 2-BINDING PERIPLASMIC PROTEIN LUXP  A 3 0 14
4  Ligand   AUTOINDUCER 2-BINDING PERIPLASMIC PROTEIN LUXP  B 2 0 13
5 Water     143 0 143
total       827 5467 170
Proteins
Unit 1 MET23 VAL24 LEU25 ASN26 GLY27 TYR28 TRP29 GLY30 TYR31 GLN32 GLU33 PHE34 LEU35 ASP36 GLU37 PHE38 PRO39 GLU40 GLN41 ARG42 ASN43 LEU44 THR45 ASN46 ALA47 LEU48 SER49 GLU50 ALA51 VAL52 ARG53 ALA54 GLN55 PRO56 VAL57 PRO58 LEU59 SER60 LYS61 PRO62 THR63 GLN64 ARG65 PRO66 ILE67 LYS68 ILE69 SER70 VAL71 VAL72 TYR73 PRO74 GLY75 GLN76 GLN77 VAL78 SER79 ASP80 TYR81 TRP82 VAL83 ARG84 ASN85 ILE86 ALA87 SER88 PHE89 GLU90 LYS91 ARG92 LEU93 TYR94 LYS95 LEU96 ASN97 ILE98 ASN99 TYR100 GLN101 LEU102 ASN103 GLN104 VAL105 PHE106 THR107 ARG108 PRO109 ASN110 ALA111 SER117 LEU118 SER119 LEU120 MET121 GLU122 ALA123 LEU124 LYS125 SER126 LYS127 SER128 ASP129 TYR130 LEU131 ILE132 PHE133 THR134 LEU135 ASP136 THR137 THR138 ARG139 HIS140 ARG141 LYS142 PHE143 VAL144 GLU145 HIS146 VAL147 LEU148 ASP149 SER150 THR151 ASN152 THR153 LYS154 LEU155 ILE156 LEU157 GLN158 ASN159 ILE160 THR161 THR162 PRO163 VAL164 ARG165 GLU166 TRP167 ASP168 LYS169 HIS170 GLN171 PRO172 PHE173 LEU174 TYR175 VAL176 GLY177 PHE178 ASP179 HIS180 ALA181 GLU182 GLY183 SER184 ARG185 GLU186 LEU187 ALA188 THR189 GLU190 PHE191 GLY192 LYS193 PHE194 PHE195 PRO196 LYS197 HIS198 THR199 TYR200 TYR201 SER202 VAL203 LEU204 TYR205 PHE206 SER207 GLU208 GLY209 TYR210 ILE211 SER212 ASP213 VAL214 ARG215 GLY216 ASP217 THR218 PHE219 ILE220 HIS221 GLN222 VAL223 ASN224 ARG225 ASP226 ASN227 ASN228 PHE229 GLU230 LEU231 GLN232 SER233 ALA234 TYR235 TYR236 THR237 LYS238 ALA239 THR240 LYS241 GLN242 SER243 GLY244 TYR245 ASP246 ALA247 ALA248 LYS249 ALA250 SER251 LEU252 ALA253 LYS254 HIS255 PRO256 ASP257 VAL258 ASP259 PHE260 ILE261 TYR262 ALA263 CYS264 SER265 THR266 ASP267 VAL268 ALA269 LEU270 GLY271 ALA272 VAL273 ASP274 ALA275 LEU276 ALA277 GLU278 LEU279 GLY280 ARG281 GLU282 ASP283 ILE284 MET285 ILE286 ASN287 GLY288 TRP289 GLY290 GLY291 GLY292 SER293 ALA294 GLU295 LEU296 ASP297 ALA298 ILE299 GLN300 LYS301 GLY302 ASP303 LEU304 ASP305 ILE306 THR307 VAL308 MET309 ARG310 MET311 ASN312 ASP313 ASP314 THR315 GLY316 ILE317 ALA318 MET319 ALA320 GLU321 ALA322 ILE323 LYS324 TRP325 ASP326 LEU327 GLU328 ASP329 LYS330 PRO331 VAL332 PRO333 THR334 VAL335 TYR336 SER337 GLY338 ASP339 PHE340 GLU341 ILE342 VAL343 THR344 LYS345 ALA346 ASP347 SER348 PRO349 GLU350 ARG351 ILE352 GLU353 ALA354 LEU355 LYS356 LYS357 ARG358 ALA359 PHE360 ARG361 TYR362 SER363 ASP364
Unit 2 MET23 VAL24 LEU25 ASN26 GLY27 TYR28 TRP29 GLY30 TYR31 GLN32 GLU33 PHE34 LEU35 ASP36 GLU37 PHE38 PRO39 GLU40 GLN41 ARG42 ASN43 LEU44 THR45 ASN46 ALA47 LEU48 SER49 GLU50 ALA51 VAL52 ARG53 ALA54 GLN55 PRO56 VAL57 PRO58 LEU59 SER60 LYS61 PRO62 THR63 GLN64 ARG65 PRO66 ILE67 LYS68 ILE69 SER70 VAL71 VAL72 TYR73 PRO74 GLY75 GLN76 GLN77 VAL78 SER79 ASP80 TYR81 TRP82 VAL83 ARG84 ASN85 ILE86 ALA87 SER88 PHE89 GLU90 LYS91 ARG92 LEU93 TYR94 LYS95 LEU96 ASN97 ILE98 ASN99 TYR100 GLN101 LEU102 ASN103 GLN104 VAL105 PHE106 THR107 ARG108 PRO109 ASN110 ALA111 ASP112 ILE113 LYS114 GLN115 GLN116 SER117 LEU118 SER119 LEU120 MET121 GLU122 ALA123 LEU124 LYS125 SER126 LYS127 SER128 ASP129 TYR130 LEU131 ILE132 PHE133 THR134 LEU135 ASP136 THR137 THR138 ARG139 HIS140 ARG141 LYS142 PHE143 VAL144 GLU145 HIS146 VAL147 LEU148 ASP149 SER150 THR151 ASN152 THR153 LYS154 LEU155 ILE156 LEU157 GLN158 ASN159 ILE160 THR161 THR162 PRO163 VAL164 ARG165 GLU166 TRP167 ASP168 LYS169 HIS170 GLN171 PRO172 PHE173 LEU174 TYR175 VAL176 GLY177 PHE178 ASP179 HIS180 ALA181 GLU182 GLY183 SER184 ARG185 GLU186 LEU187 ALA188 THR189 GLU190 PHE191 GLY192 LYS193 PHE194 PHE195 PRO196 LYS197 HIS198 THR199 TYR200 TYR201 SER202 VAL203 LEU204 TYR205 PHE206 SER207 GLU208 GLY209 TYR210 ILE211 SER212 ASP213 VAL214 ARG215 GLY216 ASP217 THR218 PHE219 ILE220 HIS221 GLN222 VAL223 ASN224 ARG225 ASP226 ASN227 ASN228 PHE229 GLU230 LEU231 GLN232 SER233 ALA234 TYR235 TYR236 THR237 LYS238 ALA239 THR240 LYS241 GLN242 SER243 GLY244 TYR245 ASP246 ALA247 ALA248 LYS249 ALA250 SER251 LEU252 ALA253 LYS254 HIS255 PRO256 ASP257 VAL258 ASP259 PHE260 ILE261 TYR262 ALA263 CYS264 SER265 THR266 ASP267 VAL268 ALA269 LEU270 GLY271 ALA272 VAL273 ASP274 ALA275 LEU276 ALA277 GLU278 LEU279 GLY280 ARG281 GLU282 ASP283 ILE284 MET285 ILE286 ASN287 GLY288 TRP289 GLY290 GLY291 GLY292 SER293 ALA294 GLU295 LEU296 ASP297 ALA298 ILE299 GLN300 LYS301 GLY302 ASP303 LEU304 ASP305 ILE306 THR307 VAL308 MET309 ARG310 MET311 ASN312 ASP313 ASP314 THR315 GLY316 ILE317 ALA318 MET319 ALA320 GLU321 ALA322 ILE323 LYS324 TRP325 ASP326 LEU327 GLU328 ASP329 LYS330 PRO331 VAL332 PRO333 THR334 VAL335 TYR336 SER337 GLY338 ASP339 PHE340 GLU341 ILE342 VAL343 THR344 LYS345 ALA346 ASP347 SER348 PRO349 GLU350 ARG351 ILE352 GLU353 ALA354 LEU355 LYS356 LYS357 ARG358 ALA359 PHE360 ARG361 TYR362 SER363 ASP364
Ligands
Unit 3 MG401 MG402 A1B403
Unit 4 CA401 A1B402
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany