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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE DM DOMAIN OF HUMAN DMRT1 BOUND TO 2 TARGET DNA
Keywords TRANSCRIPTION FACTOR, PROTEIN-DNA COMPLEX, DOUBLE ZN-FINGER, TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4YJ0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 62 497 0
2  Protein    B 63 507 0
3  Protein    C 63 505 0
4  Other macromolecule   DOUBLESEX- AND MAB-3-RELATED TRANSCRIPTION FACTOR CHAIN: A, B, CDNA (25-MER)  D 25 511 0
5  Other macromolecule   DNA (25-MER)  E 25 508 0
6  Ligand    A 2 0 2
7  Ligand    B 2 0 2
8  Ligand    C 2 0 2
total       244 2528 6

Proteins
Unit 1 SER70 PRO71 ARG72 LEU73 PRO74 LYS75 CYS76 ALA77 ARG78 CYS79 ARG80 ASN81 HIS82 GLY83 TYR84 ALA85 SER86 PRO87 LEU88 LYS89 GLY90 HIS91 LYS92 ARG93 PHE94 CYS95 MET96 TRP97 ARG98 ASP99 CYS100 GLN101 CYS102 LYS103 LYS104 CYS105 ASN106 LEU107 ILE108 ALA109 GLU110 ARG111 GLN112 ARG113 VAL114 MET115 ALA116 ALA117 GLN118 VAL119 ALA120 LEU121 ARG122 ARG123 GLN124 GLN125 ALA126 GLN127 GLU128 GLU129 GLU130 LEU131
Unit 2 LYS69 SER70 PRO71 ARG72 LEU73 PRO74 LYS75 CYS76 ALA77 ARG78 CYS79 ARG80 ASN81 HIS82 GLY83 TYR84 ALA85 SER86 PRO87 LEU88 LYS89 GLY90 HIS91 LYS92 ARG93 PHE94 CYS95 MET96 TRP97 ARG98 ASP99 CYS100 GLN101 CYS102 LYS103 LYS104 CYS105 ASN106 LEU107 ILE108 ALA109 GLU110 ARG111 GLN112 ARG113 VAL114 MET115 ALA116 ALA117 GLN118 VAL119 ALA120 LEU121 ARG122 ARG123 GLN124 GLN125 ALA126 GLN127 GLU128 GLU129 GLU130 LEU131
Unit 3 LYS69 SER70 PRO71 ARG72 LEU73 PRO74 LYS75 CYS76 ALA77 ARG78 CYS79 ARG80 ASN81 HIS82 GLY83 TYR84 ALA85 SER86 PRO87 LEU88 LYS89 GLY90 HIS91 LYS92 ARG93 PHE94 CYS95 MET96 TRP97 ARG98 ASP99 CYS100 GLN101 CYS102 LYS103 LYS104 CYS105 ASN106 LEU107 ILE108 ALA109 GLU110 ARG111 GLN112 ARG113 VAL114 MET115 ALA116 ALA117 GLN118 VAL119 ALA120 LEU121 ARG122 ARG123 GLN124 GLN125 ALA126 GLN127 GLU128 GLU129 GLU130 LEU131

Other macromolecules
Unit 4 DC1 DG2 DA3 DG4 DA5 DT6 DT7 DT8 DG9 DA10 DT11 DA12 DC13 DA14 DT15 DT16 DG17 DT18 DT19 DG20 DC21 DT22 DC23 DG24 DA25
Unit 5 DT1 DC2 DG3 DA4 DG5 DC6 DA7 DA8 DC9 DA10 DA11 DT12 DG13 DT14 DA15 DT16 DC17 DA18 DA19 DA20 DT21 DC22 DT23 DC24 DG25

Ligands
Unit 6 ZN201 ZN202
Unit 7 ZN201 ZN202
Unit 8 ZN201 ZN202

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany