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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE COMPLEX OF HELICOBACTER PYLORI ALPH ANHYDRASE WITH METHAZOLAMIDE
Keywords ZINC METALLOENZYME, METHAZOLAMIDE, LYASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4YHA     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALPHA-CARBONIC ANHYDRASE  A 225 1840 0
2  Protein   ALPHA-CARBONIC ANHYDRASE  B 221 1804 0
3  Protein   ALPHA-CARBONIC ANHYDRASE  C 227 1857 0
4  Protein   ALPHA-CARBONIC ANHYDRASE  D 219 1790 0
5  Protein   ALPHA-CARBONIC ANHYDRASE  E 225 1844 0
6  Protein   ALPHA-CARBONIC ANHYDRASE  F 215 1762 0
7  Protein   ALPHA-CARBONIC ANHYDRASE  G 225 1843 0
8  Protein   ALPHA-CARBONIC ANHYDRASE  H 225 1841 0
9  Ligand   ALPHA-CARBONIC ANHYDRASE  A 3 0 16
10  Ligand   ALPHA-CARBONIC ANHYDRASE  B 3 0 16
11  Ligand   ALPHA-CARBONIC ANHYDRASE  C 4 0 22
12  Ligand   ALPHA-CARBONIC ANHYDRASE  D 3 0 21
13  Ligand   ALPHA-CARBONIC ANHYDRASE  E 4 0 22
14  Ligand   ALPHA-CARBONIC ANHYDRASE  F 2 0 15
15  Ligand   ALPHA-CARBONIC ANHYDRASE  G 4 0 22
16  Ligand   ALPHA-CARBONIC ANHYDRASE  H 3 0 16
17 Water     585 0 585
total       2393 14581 735

Proteins
Unit 1 THR21 LYS22 TRP23 ASP24 TYR25 LYS26 ASN27 LYS28 GLU29 ASN30 GLY31 PRO32 HIS33 ARG34 TRP35 ASP36 LYS37 LEU38 HIS39 LYS40 ASP41 PHE42 GLU43 VAL44 CYS45 LYS46 SER47 GLY48 LYS49 SER50 GLN51 SER52 PRO53 ILE54 ASN55 ILE56 GLU57 HIS58 TYR59 TYR60 HIS61 THR62 GLN63 ASP64 LYS65 ALA66 ASP67 LEU68 GLN69 PHE70 LYS71 TYR72 ALA73 ALA74 SER75 LYS76 PRO77 LYS78 ALA79 VAL80 PHE81 PHE82 THR83 HIS84 HIS85 THR86 LEU87 LYS88 ALA89 SER90 PHE91 GLU92 PRO93 THR94 ASN95 HIS96 ILE97 ASN98 TYR99 ARG100 GLY101 HIS102 ASP103 TYR104 VAL105 LEU106 ASP107 ASN108 VAL109 HIS110 PHE111 HIS112 ALA113 PRO114 MET115 GLU116 PHE117 LEU118 ILE119 ASN120 ASN121 LYS122 THR123 ARG124 PRO125 LEU126 SER127 ALA128 HIS129 PHE130 VAL131 HIS132 LYS133 ASP134 ALA135 LYS136 GLY137 ARG138 LEU139 LEU140 VAL141 LEU142 ALA143 ILE144 GLY145 PHE146 GLU147 GLU148 GLY149 LYS150 GLU151 ASN152 PRO153 ASN154 LEU155 ASP156 PRO157 ILE158 LEU159 GLU160 GLY161 ILE162 GLN163 LYS164 LYS165 PHE168 LYS169 GLU170 VAL171 ALA172 LEU173 ASP174 ALA175 PHE176 LEU177 PRO178 LYS179 SER180 ILE181 ASN182 TYR183 TYR184 HIS185 PHE186 ASN187 GLY188 SER189 LEU190 THR191 ALA192 PRO193 PRO194 CYS195 THR196 GLU197 GLY198 VAL199 ALA200 TRP201 PHE202 VAL203 ILE204 GLU205 GLU206 PRO207 LEU208 GLU209 VAL210 SER211 ALA212 LYS213 GLN214 LEU215 ALA216 GLU217 ILE218 LYS219 LYS220 ARG221 MET222 LYS223 ASN224 SER225 PRO226 ASN227 GLN228 ARG229 PRO230 VAL231 GLN232 PRO233 ASP234 TYR235 ASN236 THR237 VAL238 ILE239 ILE240 LYS241 SER242 SER243 ALA244 GLU245 THR246 ARG247
Unit 2 THR21 LYS22 TRP23 ASP24 TYR25 LYS26 ASN27 LYS28 GLU29 ASN30 GLY31 PRO32 HIS33 ARG34 TRP35 ASP36 LYS37 LEU38 HIS39 LYS40 ASP41 PHE42 GLU43 VAL44 CYS45 LYS46 SER47 GLY48 LYS49 SER50 GLN51 SER52 PRO53 ILE54 ASN55 ILE56 GLU57 HIS58 TYR59 TYR60 HIS61 THR62 ALA66 ASP67 LEU68 GLN69 PHE70 LYS71 TYR72 ALA73 ALA74 SER75 LYS76 PRO77 LYS78 ALA79 VAL80 PHE81 PHE82 THR83 HIS84 HIS85 THR86 LEU87 LYS88 ALA89 SER90 PHE91 GLU92 PRO93 THR94 ASN95 HIS96 ILE97 ASN98 TYR99 ARG100 GLY101 HIS102 ASP103 TYR104 VAL105 LEU106 ASP107 ASN108 VAL109 HIS110 PHE111 HIS112 ALA113 PRO114 MET115 GLU116 PHE117 LEU118 ILE119 ASN120 ASN121 LYS122 THR123 ARG124 PRO125 LEU126 SER127 ALA128 HIS129 PHE130 VAL131 HIS132 LYS133 ASP134 ALA135 LYS136 GLY137 ARG138 LEU139 LEU140 VAL141 LEU142 ALA143 ILE144 GLY145 PHE146 GLU147 GLU148 GLY149 LYS150 GLU151 ASN152 PRO153 ASN154 LEU155 ASP156 PRO157 ILE158 LEU159 GLU160 GLY161 ILE162 GLN163 ASN167 PHE168 LYS169 GLU170 VAL171 ALA172 LEU173 ASP174 ALA175 PHE176 LEU177 PRO178 LYS179 SER180 ILE181 ASN182 TYR183 TYR184 HIS185 PHE186 ASN187 GLY188 SER189 LEU190 THR191 ALA192 PRO193 PRO194 CYS195 THR196 GLU197 GLY198 VAL199 ALA200 TRP201 PHE202 VAL203 ILE204 GLU205 GLU206 PRO207 LEU208 GLU209 VAL210 SER211 ALA212 LYS213 GLN214 LEU215 ALA216 GLU217 ILE218 LYS219 LYS220 ARG221 MET222 LYS223 ASN224 SER225 PRO226 ASN227 GLN228 ARG229 PRO230 VAL231 GLN232 PRO233 ASP234 TYR235 ASN236 THR237 VAL238 ILE239 ILE240 LYS241 SER242 SER243 ALA244 GLU245 THR246 ARG247
Unit 3 THR21 LYS22 TRP23 ASP24 TYR25 LYS26 ASN27 LYS28 GLU29 ASN30 GLY31 PRO32 HIS33 ARG34 TRP35 ASP36 LYS37 LEU38 HIS39 LYS40 ASP41 PHE42 GLU43 VAL44 CYS45 LYS46 SER47 GLY48 LYS49 SER50 GLN51 SER52 PRO53 ILE54 ASN55 ILE56 GLU57 HIS58 TYR59 TYR60 HIS61 THR62 GLN63 ASP64 LYS65 ALA66 ASP67 LEU68 GLN69 PHE70 LYS71 TYR72 ALA73 ALA74 SER75 LYS76 PRO77 LYS78 ALA79 VAL80 PHE81 PHE82 THR83 HIS84 HIS85 THR86 LEU87 LYS88 ALA89 SER90 PHE91 GLU92 PRO93 THR94 ASN95 HIS96 ILE97 ASN98 TYR99 ARG100 GLY101 HIS102 ASP103 TYR104 VAL105 LEU106 ASP107 ASN108 VAL109 HIS110 PHE111 HIS112 ALA113 PRO114 MET115 GLU116 PHE117 LEU118 ILE119 ASN120 ASN121 LYS122 THR123 ARG124 PRO125 LEU126 SER127 ALA128 HIS129 PHE130 VAL131 HIS132 LYS133 ASP134 ALA135 LYS136 GLY137 ARG138 LEU139 LEU140 VAL141 LEU142 ALA143 ILE144 GLY145 PHE146 GLU147 GLU148 GLY149 LYS150 GLU151 ASN152 PRO153 ASN154 LEU155 ASP156 PRO157 ILE158 LEU159 GLU160 GLY161 ILE162 GLN163 LYS164 LYS165 GLN166 ASN167 PHE168 LYS169 GLU170 VAL171 ALA172 LEU173 ASP174 ALA175 PHE176 LEU177 PRO178 LYS179 SER180 ILE181 ASN182 TYR183 TYR184 HIS185 PHE186 ASN187 GLY188 SER189 LEU190 THR191 ALA192 PRO193 PRO194 CYS195 THR196 GLU197 GLY198 VAL199 ALA200 TRP201 PHE202 VAL203 ILE204 GLU205 GLU206 PRO207 LEU208 GLU209 VAL210 SER211 ALA212 LYS213 GLN214 LEU215 ALA216 GLU217 ILE218 LYS219 LYS220 ARG221 MET222 LYS223 ASN224 SER225 PRO226 ASN227 GLN228 ARG229 PRO230 VAL231 GLN232 PRO233 ASP234 TYR235 ASN236 THR237 VAL238 ILE239 ILE240 LYS241 SER242 SER243 ALA244 GLU245 THR246 ARG247
Unit 4 TRP23 ASP24 TYR25 LYS26 ASN27 LYS28 GLU29 ASN30 GLY31 PRO32 HIS33 ARG34 TRP35 ASP36 LYS37 LEU38 HIS39 LYS40 ASP41 PHE42 GLU43 VAL44 CYS45 LYS46 SER47 GLY48 LYS49 SER50 GLN51 SER52 PRO53 ILE54 ASN55 ILE56 GLU57 HIS58 TYR59 TYR60 HIS61 THR62 GLN63 ASP64 ASP67 LEU68 GLN69 PHE70 LYS71 TYR72 ALA73 ALA74 SER75 LYS76 PRO77 LYS78 ALA79 VAL80 PHE81 PHE82 THR83 HIS84 HIS85 THR86 LEU87 LYS88 ALA89 SER90 PHE91 GLU92 PRO93 THR94 ASN95 HIS96 ILE97 ASN98 TYR99 ARG100 GLY101 HIS102 ASP103 TYR104 VAL105 LEU106 ASP107 ASN108 VAL109 HIS110 PHE111 HIS112 ALA113 PRO114 MET115 GLU116 PHE117 LEU118 ILE119 ASN120 ASN121 LYS122 THR123 ARG124 PRO125 LEU126 SER127 ALA128 HIS129 PHE130 VAL131 HIS132 LYS133 ASP134 ALA135 LYS136 GLY137 ARG138 LEU139 LEU140 VAL141 LEU142 ALA143 ILE144 GLY145 PHE146 GLU147 GLU148 GLY149 LYS150 GLU151 ASN152 PRO153 ASN154 LEU155 ASP156 PRO157 ILE158 LEU159 GLU160 GLY161 ILE162 GLN163 LYS164 LYS165 GLU170 VAL171 ALA172 LEU173 ASP174 ALA175 PHE176 LEU177 PRO178 LYS179 SER180 ILE181 ASN182 TYR183 TYR184 HIS185 PHE186 ASN187 GLY188 SER189 LEU190 THR191 ALA192 PRO193 PRO194 CYS195 THR196 GLU197 GLY198 VAL199 ALA200 TRP201 PHE202 VAL203 ILE204 GLU205 GLU206 PRO207 LEU208 GLU209 VAL210 SER211 ALA212 LYS213 GLN214 LEU215 ALA216 GLU217 ILE218 LYS219 LYS220 ARG221 MET222 LYS223 ASN224 SER225 PRO226 ASN227 GLN228 ARG229 PRO230 VAL231 GLN232 PRO233 ASP234 TYR235 ASN236 THR237 VAL238 ILE239 ILE240 LYS241 SER242 SER243 ALA244 GLU245 THR246 ARG247
Unit 5 THR21 LYS22 TRP23 ASP24 TYR25 LYS26 ASN27 LYS28 GLU29 ASN30 GLY31 PRO32 HIS33 ARG34 TRP35 ASP36 LYS37 LEU38 HIS39 LYS40 ASP41 PHE42 GLU43 VAL44 CYS45 LYS46 SER47 GLY48 LYS49 SER50 GLN51 SER52 PRO53 ILE54 ASN55 ILE56 GLU57 HIS58 TYR59 TYR60 HIS61 THR62 GLN63 ASP64 LYS65 LEU68 GLN69 PHE70 LYS71 TYR72 ALA73 ALA74 SER75 LYS76 PRO77 LYS78 ALA79 VAL80 PHE81 PHE82 THR83 HIS84 HIS85 THR86 LEU87 LYS88 ALA89 SER90 PHE91 GLU92 PRO93 THR94 ASN95 HIS96 ILE97 ASN98 TYR99 ARG100 GLY101 HIS102 ASP103 TYR104 VAL105 LEU106 ASP107 ASN108 VAL109 HIS110 PHE111 HIS112 ALA113 PRO114 MET115 GLU116 PHE117 LEU118 ILE119 ASN120 ASN121 LYS122 THR123 ARG124 PRO125 LEU126 SER127 ALA128 HIS129 PHE130 VAL131 HIS132 LYS133 ASP134 ALA135 LYS136 GLY137 ARG138 LEU139 LEU140 VAL141 LEU142 ALA143 ILE144 GLY145 PHE146 GLU147 GLU148 GLY149 LYS150 GLU151 ASN152 PRO153 ASN154 LEU155 ASP156 PRO157 ILE158 LEU159 GLU160 GLY161 ILE162 GLN163 LYS164 LYS165 GLN166 ASN167 PHE168 LYS169 GLU170 VAL171 ALA172 LEU173 ASP174 ALA175 PHE176 LEU177 PRO178 LYS179 SER180 ILE181 ASN182 TYR183 TYR184 HIS185 PHE186 ASN187 GLY188 SER189 LEU190 THR191 ALA192 PRO193 PRO194 CYS195 THR196 GLU197 GLY198 VAL199 ALA200 TRP201 PHE202 VAL203 ILE204 GLU205 GLU206 PRO207 LEU208 GLU209 VAL210 SER211 ALA212 LYS213 GLN214 LEU215 ALA216 GLU217 ILE218 LYS219 LYS220 ARG221 MET222 LYS223 ASN224 SER225 PRO226 ASN227 GLN228 ARG229 PRO230 VAL231 GLN232 PRO233 ASP234 TYR235 ASN236 THR237 VAL238 ILE239 ILE240 LYS241 SER242 SER243 ALA244 GLU245 THR246 ARG247
Unit 6 TRP23 ASP24 TYR25 LYS26 ASN27 LYS28 GLU29 ASN30 GLY31 PRO32 HIS33 ARG34 TRP35 ASP36 LYS37 LEU38 HIS39 LYS40 ASP41 PHE42 GLU43 VAL44 CYS45 LYS46 SER47 GLY48 LYS49 SER50 GLN51 SER52 PRO53 ILE54 ASN55 ILE56 GLU57 HIS58 TYR59 TYR60 HIS61 THR62 GLN63 ASP64 LYS65 ALA66 ASP67 LEU68 GLN69 PHE70 LYS71 TYR72 ALA73 ALA74 SER75 LYS76 PRO77 LYS78 ALA79 VAL80 PHE81 PHE82 THR83 HIS84 HIS85 THR86 LEU87 LYS88 ALA89 SER90 PHE91 GLU92 PRO93 THR94 ASN95 HIS96 ILE97 ASN98 TYR99 ARG100 GLY101 HIS102 ASP103 TYR104 VAL105 LEU106 ASP107 ASN108 VAL109 HIS110 PHE111 HIS112 ALA113 PRO114 MET115 GLU116 PHE117 LEU118 ILE119 ASN120 ASN121 LYS122 THR123 ARG124 PRO125 LEU126 SER127 ALA128 HIS129 PHE130 VAL131 HIS132 LYS133 ASP134 ALA135 LYS136 GLY137 ARG138 LEU139 LEU140 VAL141 LEU142 ALA143 ILE144 GLY145 PHE146 GLU147 GLU148 GLU151 ASN152 PRO153 ASN154 LEU155 ASP156 PRO157 ILE158 LEU159 GLU160 GLY161 ILE162 GLN163 LYS164 LYS165 ASP174 ALA175 PHE176 LEU177 PRO178 LYS179 SER180 ILE181 ASN182 TYR183 TYR184 HIS185 PHE186 ASN187 GLY188 SER189 LEU190 THR191 ALA192 PRO193 PRO194 CYS195 THR196 GLU197 GLY198 VAL199 ALA200 TRP201 PHE202 VAL203 ILE204 GLU205 GLU206 PRO207 LEU208 GLU209 VAL210 SER211 ALA212 LYS213 GLN214 LEU215 ALA216 GLU217 ILE218 LYS219 LYS220 ARG221 MET222 LYS223 ASN224 SER225 PRO226 ASN227 GLN228 ARG229 PRO230 VAL231 GLN232 PRO233 ASP234 TYR235 ASN236 THR237 VAL238 ILE239 ILE240 LYS241 SER242 SER243 ALA244 GLU245 THR246 ARG247
Unit 7 ASN20 THR21 LYS22 TRP23 ASP24 TYR25 LYS26 ASN27 LYS28 GLU29 ASN30 GLY31 PRO32 HIS33 ARG34 TRP35 ASP36 LYS37 LEU38 HIS39 LYS40 ASP41 PHE42 GLU43 VAL44 CYS45 LYS46 SER47 GLY48 LYS49 SER50 GLN51 SER52 PRO53 ILE54 ASN55 ILE56 GLU57 HIS58 TYR59 TYR60 HIS61 THR62 GLN63 ASP67 LEU68 GLN69 PHE70 LYS71 TYR72 ALA73 ALA74 SER75 LYS76 PRO77 LYS78 ALA79 VAL80 PHE81 PHE82 THR83 HIS84 HIS85 THR86 LEU87 LYS88 ALA89 SER90 PHE91 GLU92 PRO93 THR94 ASN95 HIS96 ILE97 ASN98 TYR99 ARG100 GLY101 HIS102 ASP103 TYR104 VAL105 LEU106 ASP107 ASN108 VAL109 HIS110 PHE111 HIS112 ALA113 PRO114 MET115 GLU116 PHE117 LEU118 ILE119 ASN120 ASN121 LYS122 THR123 ARG124 PRO125 LEU126 SER127 ALA128 HIS129 PHE130 VAL131 HIS132 LYS133 ASP134 ALA135 LYS136 GLY137 ARG138 LEU139 LEU140 VAL141 LEU142 ALA143 ILE144 GLY145 PHE146 GLU147 GLU148 GLY149 LYS150 GLU151 ASN152 PRO153 ASN154 LEU155 ASP156 PRO157 ILE158 LEU159 GLU160 GLY161 ILE162 GLN163 LYS164 LYS165 GLN166 ASN167 PHE168 LYS169 GLU170 VAL171 ALA172 LEU173 ASP174 ALA175 PHE176 LEU177 PRO178 LYS179 SER180 ILE181 ASN182 TYR183 TYR184 HIS185 PHE186 ASN187 GLY188 SER189 LEU190 THR191 ALA192 PRO193 PRO194 CYS195 THR196 GLU197 GLY198 VAL199 ALA200 TRP201 PHE202 VAL203 ILE204 GLU205 GLU206 PRO207 LEU208 GLU209 VAL210 SER211 ALA212 LYS213 GLN214 LEU215 ALA216 GLU217 ILE218 LYS219 LYS220 ARG221 MET222 LYS223 ASN224 SER225 PRO226 ASN227 GLN228 ARG229 PRO230 VAL231 GLN232 PRO233 ASP234 TYR235 ASN236 THR237 VAL238 ILE239 ILE240 LYS241 SER242 SER243 ALA244 GLU245 THR246 ARG247
Unit 8 TRP23 ASP24 TYR25 LYS26 ASN27 LYS28 GLU29 ASN30 GLY31 PRO32 HIS33 ARG34 TRP35 ASP36 LYS37 LEU38 HIS39 LYS40 ASP41 PHE42 GLU43 VAL44 CYS45 LYS46 SER47 GLY48 LYS49 SER50 GLN51 SER52 PRO53 ILE54 ASN55 ILE56 GLU57 HIS58 TYR59 TYR60 HIS61 THR62 GLN63 ASP64 LYS65 ALA66 ASP67 LEU68 GLN69 PHE70 LYS71 TYR72 ALA73 ALA74 SER75 LYS76 PRO77 LYS78 ALA79 VAL80 PHE81 PHE82 THR83 HIS84 HIS85 THR86 LEU87 LYS88 ALA89 SER90 PHE91 GLU92 PRO93 THR94 ASN95 HIS96 ILE97 ASN98 TYR99 ARG100 GLY101 HIS102 ASP103 TYR104 VAL105 LEU106 ASP107 ASN108 VAL109 HIS110 PHE111 HIS112 ALA113 PRO114 MET115 GLU116 PHE117 LEU118 ILE119 ASN120 ASN121 LYS122 THR123 ARG124 PRO125 LEU126 SER127 ALA128 HIS129 PHE130 VAL131 HIS132 LYS133 ASP134 ALA135 LYS136 GLY137 ARG138 LEU139 LEU140 VAL141 LEU142 ALA143 ILE144 GLY145 PHE146 GLU147 GLU148 GLY149 LYS150 GLU151 ASN152 PRO153 ASN154 LEU155 ASP156 PRO157 ILE158 LEU159 GLU160 GLY161 ILE162 GLN163 LYS164 LYS165 GLN166 ASN167 PHE168 LYS169 GLU170 VAL171 ALA172 LEU173 ASP174 ALA175 PHE176 LEU177 PRO178 LYS179 SER180 ILE181 ASN182 TYR183 TYR184 HIS185 PHE186 ASN187 GLY188 SER189 LEU190 THR191 ALA192 PRO193 PRO194 CYS195 THR196 GLU197 GLY198 VAL199 ALA200 TRP201 PHE202 VAL203 ILE204 GLU205 GLU206 PRO207 LEU208 GLU209 VAL210 SER211 ALA212 LYS213 GLN214 LEU215 ALA216 GLU217 ILE218 LYS219 LYS220 ARG221 MET222 LYS223 ASN224 SER225 PRO226 ASN227 GLN228 ARG229 PRO230 VAL231 GLN232 PRO233 ASP234 TYR235 ASN236 THR237 VAL238 ILE239 ILE240 LYS241 SER242 SER243 ALA244 GLU245 THR246 ARG247

Ligands
Unit 9 ZN301 CL302 MZM303
Unit 10 ZN301 CL302 MZM303
Unit 11 ZN301 CL302 MZM303 GOL304
Unit 12 ZN301 MZM302 GOL303
Unit 13 ZN301 CL302 MZM303 GOL304
Unit 14 ZN301 MZM302
Unit 15 ZN301 CL302 MZM303 GOL304
Unit 16 ZN301 CL302 MZM303

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany