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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE PTP DELTA IG1-FN2 IN COMPLEX WITH IL-1RACP
Keywords TRANS-SYNAPTIC COMPLEX, SYNAPSE ORGANIZER, IMMUNE SYSTEM-HYD COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4YFD     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   INTERLEUKIN-1 RECEPTOR ACCESSORY PROTEIN  B 322 2623 0
2  Protein   RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE DELTA  A 491 3784 0
3  Ligand   INTERLEUKIN-1 RECEPTOR ACCESSORY PROTEIN  B 5 0 70
4  Ligand   RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE DELTA  A 2 0 28
total       820 6407 98
Proteins
Unit 1 CYS24 ASP25 ASP26 TRP27 GLY28 LEU29 ASP30 THR31 MET32 ARG33 GLN34 ILE35 GLN36 VAL37 PHE38 GLU39 ASP40 GLU41 PRO42 ALA43 ARG44 ILE45 LYS46 CYS47 PRO48 LEU49 PHE50 GLU51 HIS52 PHE53 LEU54 LYS55 TYR56 ASN57 TYR58 SER59 THR60 ALA61 HIS62 SER63 SER64 GLY65 LEU66 THR67 LEU68 ILE69 TRP70 TYR71 TRP72 THR73 ARG74 GLN75 ASP76 ARG77 ASP78 LEU79 GLU80 GLU81 PRO82 ILE83 ASN84 PHE85 ARG86 LEU87 PRO88 GLU89 ASN90 ARG91 ILE92 SER93 LYS94 GLU95 LYS96 ASP97 VAL98 LEU99 TRP100 PHE101 ARG102 PRO103 THR104 LEU105 LEU106 ASN107 ASP108 THR109 GLY110 ASN111 TYR112 THR113 CYS114 MET115 LEU116 ARG117 ASN118 THR119 THR120 TYR121 CYS122 SER123 LYS124 VAL125 ALA126 PHE127 PRO128 LEU129 GLU130 VAL131 VAL132 GLN133 LYS134 ASP135 SER136 CYS137 PHE138 ASN139 SER140 ALA141 MET142 ARG143 PHE144 PRO145 VAL146 HIS147 LYS148 MET149 TYR150 ILE151 GLU152 HIS153 GLY154 ILE155 HIS156 LYS157 ILE158 THR159 CYS160 PRO161 ASN162 VAL163 ASP164 GLY165 TYR166 PHE167 PRO168 SER169 SER170 VAL171 LYS172 PRO173 SER174 VAL175 THR176 TRP177 TYR178 LYS179 GLY180 CYS181 THR182 GLU183 ILE184 VAL185 ASP186 PHE187 HIS188 ASN189 VAL190 LEU191 PRO192 GLU193 GLY194 MET195 ASN196 LEU197 SER198 PHE199 PHE200 ILE201 PRO202 LEU203 VAL204 SER205 ASN206 ASN207 GLY208 ASN209 TYR210 THR211 CYS212 VAL213 VAL214 THR215 TYR216 PRO217 GLU218 ASN219 GLY220 ARG221 LEU222 PHE223 HIS224 LEU225 THR226 ARG227 THR228 VAL229 THR230 VAL231 LYS232 VAL233 VAL234 GLY235 SER236 PRO237 LYS238 ASP239 ALA240 LEU241 PRO242 PRO243 GLN244 ILE245 TYR246 SER247 PRO248 ASN249 ASP250 ARG251 VAL252 VAL253 TYR254 GLU255 LYS256 GLU257 PRO258 GLY259 GLU260 GLU261 LEU262 VAL263 ILE264 PRO265 CYS266 LYS267 VAL268 TYR269 PHE270 SER271 PHE272 ILE273 MET274 ASP275 SER276 HIS277 ASN278 GLU279 VAL280 TRP281 TRP282 THR283 ILE284 ASP285 GLY286 LYS287 LYS288 PRO289 ASP290 ASP291 VAL292 THR293 VAL294 ASP295 ILE296 THR297 ILE298 ASN299 GLU300 SER301 VAL302 SER303 TYR304 SER305 SER306 THR307 GLU308 ASP309 GLU310 THR311 ARG312 THR313 GLN314 ILE315 LEU316 SER317 ILE318 LYS319 LYS320 VAL321 THR322 PRO323 GLU324 ASP325 LEU326 ARG327 ARG328 ASN329 TYR330 VAL331 CYS332 HIS333 ALA334 ARG335 ASN336 THR337 LYS338 GLY339 GLU340 ALA341 GLU342 GLN343 ALA344 ALA345
Unit 2 GLU28 THR29 PRO30 PRO31 ARG32 PHE33 THR34 ARG35 THR36 PRO37 VAL38 ASP39 GLN40 THR41 GLY42 VAL43 SER44 GLY45 GLY46 VAL47 ALA48 SER49 PHE50 ILE51 CYS52 GLN53 ALA54 THR55 GLY56 ASP57 PRO58 ARG59 PRO60 LYS61 ILE62 VAL63 TRP64 ASN65 LYS66 LYS67 GLY68 LYS69 LYS70 VAL71 SER72 ASN73 GLN74 ARG75 PHE76 GLU77 VAL78 ILE79 GLU80 PHE81 ASP82 ASP83 GLY84 SER85 GLY86 SER87 VAL88 LEU89 ARG90 ILE91 GLN92 PRO93 LEU94 ARG95 THR96 PRO97 ARG98 ASP99 GLU100 ALA101 ILE102 TYR103 GLU104 CYS105 VAL106 ALA107 SER108 ASN109 ASN110 VAL111 GLY112 GLU113 ILE114 SER115 VAL116 SER117 THR118 ARG119 LEU120 THR121 VAL122 LEU123 ARG124 GLU125 ASP126 GLN127 ILE128 PRO129 ARG130 GLY131 PHE132 PRO133 THR134 ILE135 ASP136 MET137 GLY138 PRO139 GLN140 LEU141 LYS142 VAL143 VAL144 GLU145 ARG146 THR147 ARG148 THR149 ALA150 THR151 MET152 LEU153 CYS154 ALA155 ALA156 SER157 GLY158 ASN159 PRO160 ASP161 PRO162 GLU163 ILE164 THR165 TRP166 PHE167 LYS168 ASP169 PHE170 LEU171 PRO172 VAL173 ASP174 THR175 SER176 ASN177 ASN178 ASN179 GLY180 ARG181 ILE182 LYS183 GLN184 LEU185 ARG186 SER187 GLU188 SER189 ILE190 GLY191 GLY192 THR193 PRO194 ILE195 ARG196 GLY197 ALA198 LEU199 GLN200 ILE201 GLU202 GLN203 SER204 GLU205 GLU206 SER207 ASP208 GLN209 GLY210 LYS211 TYR212 GLU213 CYS214 VAL215 ALA216 THR217 ASN218 SER219 ALA220 GLY221 THR222 ARG223 TYR224 SER225 ALA226 PRO227 ALA228 ASN229 LEU230 TYR231 VAL232 ARG233 GLU234 LEU235 ARG236 GLU237 VAL238 ARG239 ARG240 VAL241 PRO242 PRO243 ARG244 PHE245 SER246 ILE247 PRO248 PRO249 THR250 ASN251 HIS252 GLU253 ILE254 MET255 PRO256 GLY257 GLY258 SER259 VAL260 ASN261 ILE262 THR263 CYS264 VAL265 ALA266 VAL267 GLY268 SER269 PRO270 MET271 PRO272 TYR273 VAL274 LYS275 TRP276 MET277 LEU278 GLY279 ALA280 GLU281 ASP282 LEU283 THR284 PRO285 GLU286 ASP287 ASP288 MET289 PRO290 ILE291 GLY292 ARG293 ASN294 VAL295 LEU296 GLU297 LEU298 ASN299 ASP300 VAL301 ARG302 GLN303 SER304 ALA305 ASN306 TYR307 THR308 CYS309 VAL310 ALA311 MET312 SER313 THR314 LEU315 GLY316 VAL317 ILE318 GLU319 ALA320 ILE321 ALA322 GLN323 ILE324 THR325 VAL326 LYS327 ALA328 LEU329 PRO330 LYS331 PRO332 PRO333 GLY334 THR335 PRO336 VAL337 VAL338 THR339 GLU340 SER341 THR342 ALA343 THR344 SER345 ILE346 THR347 LEU348 THR349 TRP350 ASP351 SER352 GLY353 ASN354 PRO355 GLU356 PRO357 VAL358 SER359 TYR360 TYR361 ILE362 ILE363 GLN364 HIS365 LYS366 PRO367 LYS368 ASN369 SER370 GLU371 GLU372 PRO373 TYR374 LYS375 GLU376 ILE377 ASP378 GLY379 ILE380 ALA381 THR382 THR383 ARG384 TYR385 SER386 VAL387 ALA388 GLY389 LEU390 SER391 PRO392 TYR393 SER394 ASP395 TYR396 GLU397 PHE398 ARG399 VAL400 VAL401 ALA402 VAL403 ASN404 ASN405 ILE406 GLY407 ARG408 GLY409 PRO410 ALA411 SER412 GLU413 PRO414 VAL415 LEU416 THR417 GLN418 THR419 SER420 GLU421 GLN422 ALA423 PRO424 SER425 SER426 ALA427 PRO428 ARG429 ASP430 VAL431 GLN432 ALA433 ARG434 MET435 LEU436 SER437 SER438 THR439 THR440 ILE441 LEU442 VAL443 GLN444 TRP445 LYS446 GLU447 PRO448 GLU449 GLU450 PRO451 ASN452 GLY453 GLN454 ILE455 GLN456 GLY457 TYR458 ARG459 VAL460 TYR461 TYR462 THR463 MET464 ASP465 PRO466 THR467 GLN468 HIS469 VAL470 ASN471 ASN472 TRP473 MET474 LYS475 HIS476 ASN477 VAL478 ALA479 ASP480 SER481 GLN482 ILE483 THR484 THR485 ILE486 GLY487 ASN488 LEU489 VAL490 PRO491 GLN492 LYS493 THR494 TYR495 SER496 VAL497 LYS498 VAL499 LEU500 ALA501 PHE502 THR503 SER504 ILE505 GLY506 ASP507 GLY508 PRO509 LEU510 SER511 SER512 ASP513 ILE514 GLN515 VAL516 ILE517 THR518
Ligands
Unit 3 NAG401 NAG402 NAG403 NAG404 NAG405
Unit 4 NAG601 NAG602
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany