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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF LIGL IN COMPLEX WITH NADH AND GGE FROM SPHINGOBIUM SP. STRAIN SYK-6
Keywords SHORT CHAIN DEHYDROGENASE/REDUCTASE SDR FAMILY, OXIDOREDUCTA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4YAI     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   C ALPHA-DEHYDROGENASE  A 273 4103 0
2  Protein   C ALPHA-DEHYDROGENASE  B 273 4103 0
3  Ligand   C ALPHA-DEHYDROGENASE  A 2 0 71
4  Ligand   C ALPHA-DEHYDROGENASE  B 2 0 113
5 Water     559 0 559
total       1109 8206 743

Proteins
Unit 1 MET1 ASP2 ILE3 ALA4 GLY5 THR6 THR7 ALA8 PHE9 ILE10 THR11 GLY12 GLY13 ALA14 SER15 GLY16 ILE17 GLY18 PHE19 GLY20 ILE21 ALA22 GLN23 ARG24 LEU25 LEU26 ALA27 ASN28 GLY29 ALA30 ARG31 LEU32 VAL33 LEU34 ALA35 ASP36 ILE37 ARG38 GLN39 ASP40 HIS41 LEU42 ASP43 GLU44 ALA45 ARG46 GLN47 PHE48 PHE49 GLU50 GLU51 ARG52 GLN53 GLN54 GLY55 ARG56 ASN57 VAL58 HIS59 THR60 ILE61 ARG62 LEU63 ASP64 VAL65 SER66 ASP67 ARG68 ALA69 GLN70 MET71 ALA72 GLU73 ALA74 ALA75 ARG76 GLU77 CYS78 GLU79 ALA80 VAL81 MET82 GLY83 GLY84 PRO85 ASP86 ILE87 LEU88 ILE89 ASN90 ASN91 ALA92 GLY93 ILE94 ASP95 PRO96 SER97 GLY98 PRO99 PHE100 LYS101 ASP102 ALA103 THR104 TYR105 GLN106 ASP107 TRP108 ASP109 TYR110 GLY111 LEU112 ALA113 ILE114 ASN115 LEU116 MET117 GLY118 PRO119 ILE120 ASN121 GLY122 ILE123 MET124 ALA125 PHE126 THR127 PRO128 GLY129 MET130 ARG131 ALA132 ARG133 GLY134 ARG135 GLY136 GLY137 HIS138 ILE139 VAL140 ASN141 THR142 ALA143 SER144 LEU145 ALA146 GLY147 LEU148 THR149 PRO150 MET151 PRO152 SER153 PHE154 MET155 ALA156 ILE157 TYR158 ALA159 THR160 ALA161 LYS162 ALA163 ALA164 VAL165 ILE166 THR167 LEU168 THR169 GLU170 THR171 ILE172 ARG173 ASP174 SER175 MET176 ALA177 GLU178 ASP179 ASN180 ILE181 GLY182 VAL183 THR184 VAL185 LEU186 MET187 PRO188 GLY189 PRO190 ILE191 LYS192 SER193 ARG194 ILE195 HIS196 GLU197 SER198 GLY199 GLN200 ASN201 ARG202 PRO203 GLU204 ARG205 PHE206 ARG207 ALA208 GLY209 SER210 GLY211 LEU212 ALA213 GLU214 THR215 GLU216 GLN217 GLN218 LEU219 ALA220 LYS221 ARG222 VAL223 VAL224 ALA225 ASP226 ASN227 TRP228 MET229 GLU230 PRO231 THR232 GLU233 VAL234 GLY235 ASP236 MET237 ILE238 VAL239 ASP240 ALA241 ILE242 VAL243 HIS244 ASN245 LYS246 LEU247 TYR248 VAL249 SER250 THR251 HIS252 GLY253 ASN254 TRP255 ARG256 GLU257 THR258 CYS259 GLU260 ALA261 ARG262 PHE263 GLN264 ALA265 LEU266 LEU267 ASP268 SER269 MET270 PRO271 GLU272 ALA273
Unit 2 MET1 ASP2 ILE3 ALA4 GLY5 THR6 THR7 ALA8 PHE9 ILE10 THR11 GLY12 GLY13 ALA14 SER15 GLY16 ILE17 GLY18 PHE19 GLY20 ILE21 ALA22 GLN23 ARG24 LEU25 LEU26 ALA27 ASN28 GLY29 ALA30 ARG31 LEU32 VAL33 LEU34 ALA35 ASP36 ILE37 ARG38 GLN39 ASP40 HIS41 LEU42 ASP43 GLU44 ALA45 ARG46 GLN47 PHE48 PHE49 GLU50 GLU51 ARG52 GLN53 GLN54 GLY55 ARG56 ASN57 VAL58 HIS59 THR60 ILE61 ARG62 LEU63 ASP64 VAL65 SER66 ASP67 ARG68 ALA69 GLN70 MET71 ALA72 GLU73 ALA74 ALA75 ARG76 GLU77 CYS78 GLU79 ALA80 VAL81 MET82 GLY83 GLY84 PRO85 ASP86 ILE87 LEU88 ILE89 ASN90 ASN91 ALA92 GLY93 ILE94 ASP95 PRO96 SER97 GLY98 PRO99 PHE100 LYS101 ASP102 ALA103 THR104 TYR105 GLN106 ASP107 TRP108 ASP109 TYR110 GLY111 LEU112 ALA113 ILE114 ASN115 LEU116 MET117 GLY118 PRO119 ILE120 ASN121 GLY122 ILE123 MET124 ALA125 PHE126 THR127 PRO128 GLY129 MET130 ARG131 ALA132 ARG133 GLY134 ARG135 GLY136 GLY137 HIS138 ILE139 VAL140 ASN141 THR142 ALA143 SER144 LEU145 ALA146 GLY147 LEU148 THR149 PRO150 MET151 PRO152 SER153 PHE154 MET155 ALA156 ILE157 TYR158 ALA159 THR160 ALA161 LYS162 ALA163 ALA164 VAL165 ILE166 THR167 LEU168 THR169 GLU170 THR171 ILE172 ARG173 ASP174 SER175 MET176 ALA177 GLU178 ASP179 ASN180 ILE181 GLY182 VAL183 THR184 VAL185 LEU186 MET187 PRO188 GLY189 PRO190 ILE191 LYS192 SER193 ARG194 ILE195 HIS196 GLU197 SER198 GLY199 GLN200 ASN201 ARG202 PRO203 GLU204 ARG205 PHE206 ARG207 ALA208 GLY209 SER210 GLY211 LEU212 ALA213 GLU214 THR215 GLU216 GLN217 GLN218 LEU219 ALA220 LYS221 ARG222 VAL223 VAL224 ALA225 ASP226 ASN227 TRP228 MET229 GLU230 PRO231 THR232 GLU233 VAL234 GLY235 ASP236 MET237 ILE238 VAL239 ASP240 ALA241 ILE242 VAL243 HIS244 ASN245 LYS246 LEU247 TYR248 VAL249 SER250 THR251 HIS252 GLY253 ASN254 TRP255 ARG256 GLU257 THR258 CYS259 GLU260 ALA261 ARG262 PHE263 GLN264 ALA265 LEU266 LEU267 ASP268 SER269 MET270 PRO271 GLU272 ALA273

Ligands
Unit 3 NAI500 MG501
Unit 4 NAI500 GGE501

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany