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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A THERMOTOGA MARITIMA HFQ HOMOLOG
Keywords HFQ, SM PROTEIN, BETA BARREL, HEXAMER, RNA BINDING PROTEIN-R COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4Y91     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA-BINDING PROTEIN HFQ  A 66 543 0
2  Protein   RNA-BINDING PROTEIN HFQ  B 66 540 0
3  Protein   RNA-BINDING PROTEIN HFQ  C 65 532 0
4  Protein   RNA-BINDING PROTEIN HFQ  D 66 540 0
5  Protein   RNA-BINDING PROTEIN HFQ  E 66 540 0
6  Protein   RNA-BINDING PROTEIN HFQ  F 73 597 0
7  Protein   RNA-BINDING PROTEIN HFQ  G 66 540 0
8  Protein   RNA-BINDING PROTEIN HFQ  H 66 540 0
9  Protein   RNA-BINDING PROTEIN HFQ  I 65 532 0
10  Protein   RNA-BINDING PROTEIN HFQ  J 66 540 0
11  Protein   RNA-BINDING PROTEIN HFQ  K 66 540 0
12  Protein   RNA-BINDING PROTEIN HFQ  L 66 540 0
13  RNA    N 6 120 0
14  RNA    O 6 120 0
15 Water     8 0 13
total       817 6764 13
Proteins
Unit 1 PHE7 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72
Unit 2 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72 LEU73
Unit 3 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72
Unit 4 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72 LEU73
Unit 5 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72 LEU73
Unit 6 HIS0 MET1 ALA2 LEU3 ALA4 GLU5 LYS6 PHE7 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72
Unit 7 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72 LEU73
Unit 8 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72 LEU73
Unit 9 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72
Unit 10 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72 LEU73
Unit 11 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72 LEU73
Unit 12 ASN8 LEU9 GLN10 ASP11 ARG12 PHE13 LEU14 ASN15 HIS16 LEU17 ARG18 VAL19 ASN20 LYS21 ILE22 GLU23 VAL24 LYS25 VAL26 TYR27 LEU28 VAL29 ASN30 GLY31 PHE32 GLN33 THR34 LYS35 GLY36 PHE37 ILE38 ARG39 SER40 PHE41 ASP42 SER43 TYR44 THR45 VAL46 LEU47 LEU48 GLU49 SER50 GLY51 ASN52 GLN53 GLN54 SER55 LEU56 ILE57 TYR58 LYS59 HIS60 ALA61 ILE62 SER63 THR64 ILE65 ILE66 PRO67 SER68 SER69 TYR70 VAL71 MET72 LEU73
Nucleic acids
Unit 13 U1 U2 U3 U4 U5 U6
Unit 14 U1 U2 U3 U4 U5 U6
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany