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Sequence, Chains, Asymmetric and Biological Units

Title DIABODY 305 COMPLEX WITH EPOR
Keywords DIABODY COMPLEX, RECEPTOR, PROTEIN BINDING-IMMUNE SYSTEM COM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4Y5X     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DIABODY 310 VL DOMAIN  A 124 925 0
2  Protein   DIABODY 310 VH DOMAIN  B 111 809 0
3  Protein   ERYTHROPOIETIN RECEPTOR  C 205 1570 0
4  Protein   DIABODY 310 VL DOMAIN  D 124 913 0
5  Protein   DIABODY 310 VH DOMAIN  E 111 813 0
6  Protein   ERYTHROPOIETIN RECEPTOR  F 206 1564 0
7  Protein   DIABODY 310 VL DOMAIN  G 124 913 0
8  Protein   DIABODY 310 VH DOMAIN  H 109 780 0
9  Protein   ERYTHROPOIETIN RECEPTOR  I 207 1569 0
10  Protein   DIABODY 310 VL DOMAIN  J 124 925 0
11  Protein   DIABODY 310 VH DOMAIN  K 111 812 0
12  Protein   ERYTHROPOIETIN RECEPTOR  L 206 1581 0
13  Ligand   DIABODY 310 VL DOMAIN  A 1 0 7
14  Ligand   DIABODY 310 VH DOMAIN  B 3 0 21
15  Ligand   ERYTHROPOIETIN RECEPTOR  C 3 0 21
16  Ligand   DIABODY 310 VH DOMAIN  E 1 0 7
17  Ligand   ERYTHROPOIETIN RECEPTOR  F 1 0 7
18  Ligand   DIABODY 310 VL DOMAIN  G 2 0 14
19  Ligand   DIABODY 310 VH DOMAIN  H 1 0 7
20  Ligand   DIABODY 310 VL DOMAIN  J 1 0 7
21  Ligand   DIABODY 310 VH DOMAIN  K 2 0 20
22  Ligand   ERYTHROPOIETIN RECEPTOR  L 3 0 21
23 Water     26 0 28
total       1806 13174 160

Proteins
Unit 1 GLU1 VAL2 GLN3 LEU4 LEU5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 ALA33 MET34 SER35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 ALA50 ILE51 SER52 GLY53 SER54 GLY55 GLY56 SER57 THR58 TYR59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASN74 SER75 LYS76 ASN77 THR78 LEU79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 ARG87 ALA88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 VAL97 LYS98 ASP99 ARG100 VAL101 ALA102 VAL103 ALA104 GLY105 LYS106 GLY107 SER108 TYR109 TYR110 PHE111 ASP112 SER113 TRP114 GLY115 ARG116 GLY117 THR118 THR119 VAL120 THR121 VAL122 SER123 SER124
Unit 2 GLN1 SER2 VAL3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL10 SER11 GLU12 ALA13 PRO14 GLY15 GLN16 ARG17 VAL18 THR19 ILE20 ALA21 CYS22 SER23 GLY24 SER25 SER26 SER27 ASN28 ILE29 GLY30 ASN31 ASN32 ALA33 VAL34 SER35 TRP36 TYR37 GLN38 GLN39 LEU40 PRO41 GLY42 LYS43 ALA44 PRO45 THR46 LEU47 LEU48 ILE49 TYR50 TYR51 ASP52 ASN53 LEU54 LEU55 PRO56 SER57 GLY58 VAL59 SER60 ASP61 ARG62 PHE63 SER64 GLY65 SER66 LYS67 SER68 GLY69 THR70 SER71 ALA72 SER73 LEU74 ALA75 ILE76 SER77 GLY78 LEU79 GLN80 SER81 GLU82 ASP83 GLU84 ALA85 ASP86 TYR87 TYR88 CYS89 ALA90 ALA91 TRP92 ASP93 ASP94 SER95 LEU96 ASN97 ASP98 TRP99 VAL100 PHE101 GLY102 GLY103 GLY104 THR105 LYS106 VAL107 THR108 VAL109 LEU110 ALA111
Unit 3 PHE11 GLU12 SER13 LYS14 ALA15 ALA16 LEU17 LEU18 ALA19 ALA20 ARG21 GLY22 PRO23 GLU24 GLU25 LEU26 LEU27 CYS28 PHE29 THR30 GLU31 ARG32 LEU33 GLU34 ASP35 LEU36 VAL37 CYS38 PHE39 TRP40 GLU41 GLU42 ALA43 PRO50 GLY51 GLN52 TYR53 SER54 PHE55 SER56 TYR57 GLN58 LEU59 GLU60 ASP61 GLU62 PRO63 TRP64 LYS65 LEU66 CYS67 ARG68 LEU69 HIS70 GLN71 ALA72 PRO73 THR74 ALA75 ARG76 GLY77 ALA78 VAL79 ARG80 PHE81 TRP82 CYS83 SER84 LEU85 PRO86 THR87 ALA88 ASP89 THR90 SER91 SER92 PHE93 VAL94 PRO95 LEU96 GLU97 LEU98 ARG99 VAL100 THR101 ALA102 ALA103 SER104 GLY105 ALA106 PRO107 ARG108 TYR109 HIS110 ARG111 VAL112 ILE113 HIS114 ILE115 ASN116 GLU117 VAL118 VAL119 LEU120 LEU121 ASP122 ALA123 PRO124 VAL125 GLY126 LEU127 VAL128 ALA129 ARG130 LEU131 ALA132 ASP133 GLU134 SER135 HIS137 VAL138 VAL139 LEU140 ARG141 TRP142 LEU143 PRO144 PRO145 PRO146 GLU147 THR148 PRO149 MET150 THR151 SER152 HIS153 ILE154 ARG155 TYR156 GLU157 VAL158 ASP159 VAL160 SER161 ALA162 GLY163 GLN164 GLY165 ALA166 GLY167 SER168 VAL169 GLN170 ARG171 VAL172 GLU173 ILE174 LEU175 GLU176 GLY177 ARG178 THR179 GLU180 CYS181 VAL182 LEU183 SER184 ASN185 LEU186 ARG187 GLY188 ARG189 THR190 ARG191 TYR192 THR193 PHE194 ALA195 VAL196 ARG197 ALA198 ARG199 MET200 ALA201 GLU202 PRO203 SER204 PHE205 GLY206 GLY207 PHE208 TRP209 SER210 ALA211 TRP212 SER213 GLU214 PRO215 VAL216 SER217 LEU218 LEU219 THR220 PRO221 SER222
Unit 4 GLU1 VAL2 GLN3 LEU4 LEU5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 ALA33 MET34 SER35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 ALA50 ILE51 SER52 GLY53 SER54 GLY55 GLY56 SER57 THR58 TYR59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASN74 SER75 LYS76 ASN77 THR78 LEU79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 ARG87 ALA88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 VAL97 LYS98 ASP99 ARG100 VAL101 ALA102 VAL103 ALA104 GLY105 LYS106 GLY107 SER108 TYR109 TYR110 PHE111 ASP112 SER113 TRP114 GLY115 ARG116 GLY117 THR118 THR119 VAL120 THR121 VAL122 SER123 SER124
Unit 5 GLN1 SER2 VAL3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL10 SER11 GLU12 ALA13 PRO14 GLY15 GLN16 ARG17 VAL18 THR19 ILE20 ALA21 CYS22 SER23 GLY24 SER25 SER26 SER27 ASN28 ILE29 GLY30 ASN31 ASN32 ALA33 VAL34 SER35 TRP36 TYR37 GLN38 GLN39 LEU40 PRO41 GLY42 LYS43 ALA44 PRO45 THR46 LEU47 LEU48 ILE49 TYR50 TYR51 ASP52 ASN53 LEU54 LEU55 PRO56 SER57 GLY58 VAL59 SER60 ASP61 ARG62 PHE63 SER64 GLY65 SER66 LYS67 SER68 GLY69 THR70 SER71 ALA72 SER73 LEU74 ALA75 ILE76 SER77 GLY78 LEU79 GLN80 SER81 GLU82 ASP83 GLU84 ALA85 ASP86 TYR87 TYR88 CYS89 ALA90 ALA91 TRP92 ASP93 ASP94 SER95 LEU96 ASN97 ASP98 TRP99 VAL100 PHE101 GLY102 GLY103 GLY104 THR105 LYS106 VAL107 THR108 VAL109 LEU110 ALA111
Unit 6 PHE11 GLU12 SER13 LYS14 ALA15 ALA16 LEU17 LEU18 ALA19 ALA20 ARG21 GLY22 PRO23 GLU24 GLU25 LEU26 LEU27 CYS28 PHE29 THR30 GLU31 ARG32 LEU33 GLU34 ASP35 LEU36 VAL37 CYS38 PHE39 TRP40 GLU41 GLU42 ALA43 ALA44 GLY51 GLN52 TYR53 SER54 PHE55 SER56 TYR57 GLN58 LEU59 GLU60 ASP61 GLU62 PRO63 TRP64 LYS65 LEU66 CYS67 ARG68 LEU69 HIS70 GLN71 ALA72 PRO73 THR74 ALA75 ARG76 GLY77 ALA78 VAL79 ARG80 PHE81 TRP82 CYS83 SER84 LEU85 PRO86 THR87 ALA88 ASP89 THR90 SER91 SER92 PHE93 VAL94 PRO95 LEU96 GLU97 LEU98 ARG99 VAL100 THR101 ALA102 ALA103 SER104 GLY105 ALA106 PRO107 ARG108 TYR109 HIS110 ARG111 VAL112 ILE113 HIS114 ILE115 ASN116 GLU117 VAL118 VAL119 LEU120 LEU121 ASP122 ALA123 PRO124 VAL125 GLY126 LEU127 VAL128 ALA129 ARG130 LEU131 ALA132 ASP133 GLU134 SER135 GLY136 HIS137 VAL138 VAL139 LEU140 ARG141 TRP142 LEU143 PRO144 PRO145 PRO146 GLU147 THR148 PRO149 MET150 THR151 SER152 HIS153 ILE154 ARG155 TYR156 GLU157 VAL158 ASP159 VAL160 SER161 ALA162 GLY163 GLN164 GLY165 ALA166 GLY167 SER168 VAL169 GLN170 ARG171 VAL172 GLU173 ILE174 LEU175 GLU176 GLY177 ARG178 THR179 GLU180 CYS181 VAL182 LEU183 SER184 ASN185 LEU186 ARG187 GLY188 ARG189 THR190 ARG191 TYR192 THR193 PHE194 ALA195 VAL196 ARG197 ALA198 ARG199 MET200 ALA201 GLU202 PRO203 SER204 PHE205 GLY206 GLY207 PHE208 TRP209 SER210 ALA211 TRP212 SER213 GLU214 PRO215 VAL216 SER217 LEU218 LEU219 THR220 PRO221 SER222
Unit 7 GLU1 VAL2 GLN3 LEU4 LEU5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 ALA33 MET34 SER35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 ALA50 ILE51 SER52 GLY53 SER54 GLY55 GLY56 SER57 THR58 TYR59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASN74 SER75 LYS76 ASN77 THR78 LEU79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 ARG87 ALA88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 VAL97 LYS98 ASP99 ARG100 VAL101 ALA102 VAL103 ALA104 GLY105 LYS106 GLY107 SER108 TYR109 TYR110 PHE111 ASP112 SER113 TRP114 GLY115 ARG116 GLY117 THR118 THR119 VAL120 THR121 VAL122 SER123 SER124
Unit 8 GLN1 SER2 VAL3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL10 SER11 GLU12 ALA13 PRO14 GLY15 GLN16 ARG17 VAL18 THR19 ILE20 ALA21 CYS22 SER23 GLY24 SER25 SER26 SER27 ASN28 ILE29 GLY30 ASN31 ASN32 ALA33 VAL34 SER35 TRP36 TYR37 GLN38 GLN39 LEU40 PRO41 GLY42 LYS43 ALA44 PRO45 THR46 LEU47 LEU48 ILE49 TYR50 TYR51 ASP52 ASN53 LEU54 LEU55 PRO56 SER57 GLY58 VAL59 SER60 ASP61 ARG62 PHE63 SER64 GLY65 SER66 LYS67 SER68 GLY69 THR70 SER71 ALA72 SER73 LEU74 ALA75 ILE76 SER77 GLY78 LEU79 GLN80 SER81 GLU82 ASP83 GLU84 ALA85 ASP86 TYR87 TYR88 CYS89 ALA90 ALA91 TRP92 ASP93 ASP94 SER95 LEU96 ASN97 ASP98 TRP99 VAL100 PHE101 GLY102 GLY103 GLY104 THR105 LYS106 VAL107 THR108 VAL109
Unit 9 LYS10 PHE11 GLU12 SER13 LYS14 ALA15 ALA16 LEU17 LEU18 ALA19 ALA20 ARG21 GLY22 PRO23 GLU24 GLU25 LEU26 LEU27 CYS28 PHE29 THR30 GLU31 ARG32 LEU33 GLU34 ASP35 LEU36 VAL37 CYS38 PHE39 TRP40 GLU41 GLU42 ALA43 PRO50 GLY51 GLN52 TYR53 SER54 PHE55 SER56 TYR57 GLN58 LEU59 GLU60 ASP61 GLU62 PRO63 TRP64 LYS65 LEU66 CYS67 ARG68 LEU69 HIS70 GLN71 ALA72 PRO73 THR74 ALA75 ARG76 GLY77 ALA78 VAL79 ARG80 PHE81 TRP82 CYS83 SER84 LEU85 PRO86 THR87 ALA88 ASP89 THR90 SER91 SER92 PHE93 VAL94 PRO95 LEU96 GLU97 LEU98 ARG99 VAL100 THR101 ALA102 ALA103 SER104 GLY105 ALA106 PRO107 ARG108 TYR109 HIS110 ARG111 VAL112 ILE113 HIS114 ILE115 ASN116 GLU117 VAL118 VAL119 LEU120 LEU121 ASP122 ALA123 PRO124 VAL125 GLY126 LEU127 VAL128 ALA129 ARG130 LEU131 ALA132 ASP133 GLU134 SER135 GLY136 HIS137 VAL138 VAL139 LEU140 ARG141 TRP142 LEU143 PRO144 PRO145 PRO146 GLU147 THR148 PRO149 MET150 THR151 SER152 HIS153 ILE154 ARG155 TYR156 GLU157 VAL158 ASP159 VAL160 SER161 ALA162 GLY163 GLN164 GLY165 ALA166 GLY167 SER168 VAL169 GLN170 ARG171 VAL172 GLU173 ILE174 LEU175 GLU176 GLY177 ARG178 THR179 GLU180 CYS181 VAL182 LEU183 SER184 ASN185 LEU186 ARG187 GLY188 ARG189 THR190 ARG191 TYR192 THR193 PHE194 ALA195 VAL196 ARG197 ALA198 ARG199 MET200 ALA201 GLU202 PRO203 SER204 PHE205 GLY206 GLY207 PHE208 TRP209 SER210 ALA211 TRP212 SER213 GLU214 PRO215 VAL216 SER217 LEU218 LEU219 THR220 PRO221 SER222
Unit 10 GLU1 VAL2 GLN3 LEU4 LEU5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 ALA33 MET34 SER35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 ALA50 ILE51 SER52 GLY53 SER54 GLY55 GLY56 SER57 THR58 TYR59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASN74 SER75 LYS76 ASN77 THR78 LEU79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 ARG87 ALA88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 VAL97 LYS98 ASP99 ARG100 VAL101 ALA102 VAL103 ALA104 GLY105 LYS106 GLY107 SER108 TYR109 TYR110 PHE111 ASP112 SER113 TRP114 GLY115 ARG116 GLY117 THR118 THR119 VAL120 THR121 VAL122 SER123 SER124
Unit 11 GLN1 SER2 VAL3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL10 SER11 GLU12 ALA13 PRO14 GLY15 GLN16 ARG17 VAL18 THR19 ILE20 ALA21 CYS22 SER23 GLY24 SER25 SER26 SER27 ASN28 ILE29 GLY30 ASN31 ASN32 ALA33 VAL34 SER35 TRP36 TYR37 GLN38 GLN39 LEU40 PRO41 GLY42 LYS43 ALA44 PRO45 THR46 LEU47 LEU48 ILE49 TYR50 TYR51 ASP52 ASN53 LEU54 LEU55 PRO56 SER57 GLY58 VAL59 SER60 ASP61 ARG62 PHE63 SER64 GLY65 SER66 LYS67 SER68 GLY69 THR70 SER71 ALA72 SER73 LEU74 ALA75 ILE76 SER77 GLY78 LEU79 GLN80 SER81 GLU82 ASP83 GLU84 ALA85 ASP86 TYR87 TYR88 CYS89 ALA90 ALA91 TRP92 ASP93 ASP94 SER95 LEU96 ASN97 ASP98 TRP99 VAL100 PHE101 GLY102 GLY103 GLY104 THR105 LYS106 VAL107 THR108 VAL109 LEU110 ALA111
Unit 12 PHE11 GLU12 SER13 LYS14 ALA15 ALA16 LEU17 LEU18 ALA19 ALA20 ARG21 GLY22 PRO23 GLU24 GLU25 LEU26 LEU27 CYS28 PHE29 THR30 GLU31 ARG32 LEU33 GLU34 ASP35 LEU36 VAL37 CYS38 PHE39 TRP40 GLU41 GLU42 ALA43 PRO50 GLY51 GLN52 TYR53 SER54 PHE55 SER56 TYR57 GLN58 LEU59 GLU60 ASP61 GLU62 PRO63 TRP64 LYS65 LEU66 CYS67 ARG68 LEU69 HIS70 GLN71 ALA72 PRO73 THR74 ALA75 ALA78 VAL79 ARG80 PHE81 TRP82 CYS83 SER84 LEU85 PRO86 THR87 ALA88 ASP89 THR90 SER91 SER92 PHE93 VAL94 PRO95 LEU96 GLU97 LEU98 ARG99 VAL100 THR101 ALA102 ALA103 SER104 GLY105 ALA106 PRO107 ARG108 TYR109 HIS110 ARG111 VAL112 ILE113 HIS114 ILE115 ASN116 GLU117 VAL118 VAL119 LEU120 LEU121 ASP122 ALA123 PRO124 VAL125 GLY126 LEU127 VAL128 ALA129 ARG130 LEU131 ALA132 ASP133 GLU134 SER135 GLY136 HIS137 VAL138 VAL139 LEU140 ARG141 TRP142 LEU143 PRO144 PRO145 PRO146 GLU147 THR148 PRO149 MET150 THR151 SER152 HIS153 ILE154 ARG155 TYR156 GLU157 VAL158 ASP159 VAL160 SER161 ALA162 GLY163 GLN164 GLY165 ALA166 GLY167 SER168 VAL169 GLN170 ARG171 VAL172 GLU173 ILE174 LEU175 GLU176 GLY177 ARG178 THR179 GLU180 CYS181 VAL182 LEU183 SER184 ASN185 LEU186 ARG187 GLY188 ARG189 THR190 ARG191 TYR192 THR193 PHE194 ALA195 VAL196 ARG197 ALA198 ARG199 MET200 ALA201 GLU202 PRO203 SER204 PHE205 GLY206 GLY207 PHE208 TRP209 SER210 ALA211 TRP212 SER213 GLU214 PRO215 VAL216 SER217 LEU218 LEU219 THR220 PRO221 SER222 ASP223 LEU224

Ligands
Unit 13 PEG201
Unit 14 PEG201 PEG202 PEG203
Unit 15 PEG301 PEG302 PEG303
Unit 16 PEG201
Unit 17 PEG301
Unit 18 PEG201 PEG202
Unit 19 PEG201
Unit 20 PEG201
Unit 21 PEG201 FLC202
Unit 22 PEG301 PEG302 PEG303

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany