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Title | CRYSTAL STRUCTURE OF HUMAN TDP-43 RRM1 DOMAIN IN COMPLEX WIT UNMODIFIED SINGLE-STRANDED DNA | |
Keywords | RNA RECOGNITION MOTIF 1 COMPLEX, DNA BINDING PROTEIN-DNA COM | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4Y0F | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | TAR DNA-BINDING PROTEIN 43 | A | 78 | 1269 | 0 |
2 | Protein | TAR DNA-BINDING PROTEIN 43 | B | 77 | 1258 | 0 |
3 | Other macromolecule | DNA (5'-D(*GP*TP*TP*GP*AP*GP*CP*GP*TP*T)-3') | C | 10 | 205 | 0 |
4 | Other macromolecule | DNA (5'-D(*GP*TP*TP*GP*AP*GP*CP*GP*TP*T)-3') | D | 4 | 84 | 0 |
5 | Water | 37 | 0 | 37 | ||
total | 206 | 2816 | 37 |
Unit 1 | THR103 SER104 ASP105 LEU106 ILE107 VAL108 LEU109 GLY110 LEU111 PRO112 TRP113 LYS114 THR115 THR116 GLU117 GLN118 ASP119 LEU120 LYS121 GLU122 TYR123 PHE124 SER125 THR126 PHE127 GLY128 GLU129 VAL130 LEU131 MET132 VAL133 GLN134 VAL135 LYS136 LYS137 ASP138 LEU139 LYS140 THR141 GLY142 HIS143 SER144 LYS145 GLY146 PHE147 GLY148 PHE149 VAL150 ARG151 PHE152 THR153 GLU154 TYR155 GLU156 THR157 GLN158 VAL159 LYS160 VAL161 MET162 SER163 GLN164 ARG165 HIS166 MET167 ILE168 ASP169 GLY170 ARG171 TRP172 CYS173 ASP174 CYS175 LYS176 LEU177 PRO178 ASN179 SER180 |
Unit 2 | THR103 SER104 ASP105 LEU106 ILE107 VAL108 LEU109 GLY110 LEU111 PRO112 TRP113 LYS114 THR115 THR116 GLU117 GLN118 ASP119 LEU120 LYS121 GLU122 TYR123 PHE124 SER125 THR126 PHE127 GLY128 GLU129 VAL130 LEU131 MET132 VAL133 GLN134 VAL135 LYS136 LYS137 ASP138 LEU139 LYS140 THR141 GLY142 HIS143 SER144 LYS145 GLY146 PHE147 GLY148 PHE149 VAL150 ARG151 PHE152 THR153 GLU154 TYR155 GLU156 THR157 GLN158 VAL159 LYS160 VAL161 MET162 SER163 GLN164 ARG165 HIS166 MET167 ILE168 ASP169 GLY170 ARG171 TRP172 CYS173 ASP174 CYS175 LYS176 LEU177 PRO178 ASN179 |
Unit 3 | DG1 DT2 DT3 DG4 DA5 DG6 DC7 DG8 DT9 DT10 |
Unit 4 | DG4 DA5 DG6 DC7 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |