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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1-2 AND PROTOCADHER 2 SPLICE VARIANT
Keywords MECHANOTRANSDUCTION, CALCIUM BINDING PROTEIN, CELL ADHESION,
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4XXW     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTOCADHERIN-15  B 229 1802 0
2  Protein   PROTOCADHERIN-15  A 229 1802 0
3  Protein   CADHERIN-23  C 204 1593 0
4  Protein   CADHERIN-23  D 204 1593 0
5  Ligand   PROTOCADHERIN-15  B 4 0 4
6  Ligand   PROTOCADHERIN-15  A 4 0 4
7  Ligand   CADHERIN-23  C 4 0 4
8  Ligand   CADHERIN-23  D 4 0 4
9 Water     463 0 463
total       1345 6790 479

Proteins
Unit 1 ASP8 ASP9 ASP10 CYS11 LYS12 LEU13 ALA14 ARG15 GLY16 GLY17 PRO18 PRO19 ALA20 THR21 ILE22 VAL23 ALA24 ILE25 ASP26 GLU27 GLU28 SER29 ARG30 ASN31 GLY32 THR33 ILE34 LEU35 VAL36 ASP37 ASN38 MET39 LEU40 ILE41 LYS42 GLY43 THR44 ALA45 GLY46 GLY47 PRO48 ASP49 PRO50 THR51 ILE52 GLU53 LEU54 SER55 LEU56 LYS57 ASP58 ASN59 VAL60 ASP61 TYR62 TRP63 VAL64 LEU65 LEU66 ASP67 PRO68 VAL69 LYS70 GLN71 MET72 LEU73 PHE74 LEU75 ASN76 SER77 THR78 GLY79 ARG80 VAL81 LEU82 ASP83 ARG84 ASP85 PRO86 PRO87 MET88 ASN89 ILE90 HIS91 SER92 ILE93 VAL94 VAL95 GLN96 VAL97 GLN98 CYS99 VAL100 ASN101 LYS102 LYS103 VAL104 GLY105 THR106 VAL107 ILE108 TYR109 HIS110 GLU111 VAL112 ARG113 ILE114 VAL115 VAL116 ARG117 ASP118 ARG119 ASN120 ASP121 ASN122 SER123 PRO124 THR125 PHE126 LYS127 HIS128 GLU129 SER130 TYR131 TYR132 ALA133 THR134 VAL135 ASN136 GLU137 LEU138 THR139 PRO140 VAL141 GLY142 THR143 THR144 ILE145 PHE146 THR147 GLY148 PHE149 SER150 GLY151 ASP152 ASN153 GLY154 ALA155 THR156 ASP157 ILE158 ASP159 ASP160 GLY161 PRO162 ASN163 GLY164 GLN165 ILE166 GLU167 TYR168 VAL169 ILE170 GLN171 TYR172 ASN173 PRO174 GLU175 ASP176 PRO177 THR178 SER179 ASN180 ASP181 THR182 PHE183 GLU184 ILE185 PRO186 LEU187 MET188 LEU189 THR190 GLY191 ASN192 VAL193 VAL194 LEU195 ARG196 LYS197 ARG198 LEU199 ASN200 TYR201 GLU202 ASP203 LYS204 THR205 ARG206 TYR207 TYR208 VAL209 ILE210 ILE211 GLN212 ALA213 ASN214 ASP215 ARG216 ALA217 GLN218 ASN219 LEU220 ASN221 GLU222 ARG223 ARG224 THR225 THR226 THR227 THR228 THR229 LEU230 THR231 VAL232 ASP233 LEU234 GLU235 HIS236
Unit 2 ASP8 ASP9 ASP10 CYS11 LYS12 LEU13 ALA14 ARG15 GLY16 GLY17 PRO18 PRO19 ALA20 THR21 ILE22 VAL23 ALA24 ILE25 ASP26 GLU27 GLU28 SER29 ARG30 ASN31 GLY32 THR33 ILE34 LEU35 VAL36 ASP37 ASN38 MET39 LEU40 ILE41 LYS42 GLY43 THR44 ALA45 GLY46 GLY47 PRO48 ASP49 PRO50 THR51 ILE52 GLU53 LEU54 SER55 LEU56 LYS57 ASP58 ASN59 VAL60 ASP61 TYR62 TRP63 VAL64 LEU65 LEU66 ASP67 PRO68 VAL69 LYS70 GLN71 MET72 LEU73 PHE74 LEU75 ASN76 SER77 THR78 GLY79 ARG80 VAL81 LEU82 ASP83 ARG84 ASP85 PRO86 PRO87 MET88 ASN89 ILE90 HIS91 SER92 ILE93 VAL94 VAL95 GLN96 VAL97 GLN98 CYS99 VAL100 ASN101 LYS102 LYS103 VAL104 GLY105 THR106 VAL107 ILE108 TYR109 HIS110 GLU111 VAL112 ARG113 ILE114 VAL115 VAL116 ARG117 ASP118 ARG119 ASN120 ASP121 ASN122 SER123 PRO124 THR125 PHE126 LYS127 HIS128 GLU129 SER130 TYR131 TYR132 ALA133 THR134 VAL135 ASN136 GLU137 LEU138 THR139 PRO140 VAL141 GLY142 THR143 THR144 ILE145 PHE146 THR147 GLY148 PHE149 SER150 GLY151 ASP152 ASN153 GLY154 ALA155 THR156 ASP157 ILE158 ASP159 ASP160 GLY161 PRO162 ASN163 GLY164 GLN165 ILE166 GLU167 TYR168 VAL169 ILE170 GLN171 TYR172 ASN173 PRO174 GLU175 ASP176 PRO177 THR178 SER179 ASN180 ASP181 THR182 PHE183 GLU184 ILE185 PRO186 LEU187 MET188 LEU189 THR190 GLY191 ASN192 VAL193 VAL194 LEU195 ARG196 LYS197 ARG198 LEU199 ASN200 TYR201 GLU202 ASP203 LYS204 THR205 ARG206 TYR207 TYR208 VAL209 ILE210 ILE211 GLN212 ALA213 ASN214 ASP215 ARG216 ALA217 GLN218 ASN219 LEU220 ASN221 GLU222 ARG223 ARG224 THR225 THR226 THR227 THR228 THR229 LEU230 THR231 VAL232 ASP233 LEU234 GLU235 HIS236
Unit 3 GLN1 VAL2 ASN3 ARG4 LEU5 PRO6 PHE7 PHE8 THR9 ASN10 HIS11 PHE12 PHE13 ASP14 THR15 TYR16 LEU17 LEU18 ILE19 SER20 GLU21 ASP22 THR23 PRO24 VAL25 GLY26 SER27 SER28 VAL29 THR30 GLN31 LEU32 LEU33 ALA34 ARG35 ASP36 MET37 ASP38 ASN39 ASP40 PRO41 LEU42 VAL43 PHE44 GLY45 VAL46 SER47 GLY48 GLU49 GLU50 ALA51 SER52 ARG53 PHE54 PHE55 ALA56 VAL57 GLU58 PRO59 ASP60 THR61 GLY62 VAL63 VAL64 TRP65 LEU66 ARG67 GLN68 PRO69 LEU70 ASP71 ARG72 GLU73 THR74 LYS75 SER76 GLU77 PHE78 THR79 VAL80 GLU81 PHE82 SER83 VAL84 SER85 ASP86 HIS87 GLN88 GLY89 VAL90 ILE91 THR92 ARG93 LYS94 VAL95 ASN96 ILE97 GLN98 VAL99 GLY100 ASP101 VAL102 ASN103 ASP104 ASN105 ALA106 PRO107 THR108 PHE109 HIS110 ASN111 GLN112 PRO113 TYR114 SER115 VAL116 ARG117 ILE118 PRO119 GLU120 ASN121 THR122 PRO123 VAL124 GLY125 THR126 PRO127 ILE128 PHE129 ILE130 VAL131 ASN132 ALA133 THR134 ASP135 PRO136 ASP137 LEU138 GLY139 ALA140 GLY141 GLY142 SER143 VAL144 LEU145 TYR146 SER147 PHE148 GLN149 PRO150 PRO151 SER152 PRO153 PHE154 PHE155 ALA156 ILE157 ASP158 SER159 ALA160 ARG161 GLY162 ILE163 VAL164 THR165 VAL166 ILE167 GLN168 GLU169 LEU170 ASP171 TYR172 GLU173 VAL174 THR175 GLN176 ALA177 TYR178 GLN179 LEU180 THR181 VAL182 ASN183 ALA184 THR185 ASP186 GLN187 ASP188 LYS189 THR190 ARG191 PRO192 LEU193 SER194 THR195 LEU196 ALA197 ASN198 LEU199 ALA200 ILE201 ILE202 ILE203 THR204
Unit 4 GLN1 VAL2 ASN3 ARG4 LEU5 PRO6 PHE7 PHE8 THR9 ASN10 HIS11 PHE12 PHE13 ASP14 THR15 TYR16 LEU17 LEU18 ILE19 SER20 GLU21 ASP22 THR23 PRO24 VAL25 GLY26 SER27 SER28 VAL29 THR30 GLN31 LEU32 LEU33 ALA34 ARG35 ASP36 MET37 ASP38 ASN39 ASP40 PRO41 LEU42 VAL43 PHE44 GLY45 VAL46 SER47 GLY48 GLU49 GLU50 ALA51 SER52 ARG53 PHE54 PHE55 ALA56 VAL57 GLU58 PRO59 ASP60 THR61 GLY62 VAL63 VAL64 TRP65 LEU66 ARG67 GLN68 PRO69 LEU70 ASP71 ARG72 GLU73 THR74 LYS75 SER76 GLU77 PHE78 THR79 VAL80 GLU81 PHE82 SER83 VAL84 SER85 ASP86 HIS87 GLN88 GLY89 VAL90 ILE91 THR92 ARG93 LYS94 VAL95 ASN96 ILE97 GLN98 VAL99 GLY100 ASP101 VAL102 ASN103 ASP104 ASN105 ALA106 PRO107 THR108 PHE109 HIS110 ASN111 GLN112 PRO113 TYR114 SER115 VAL116 ARG117 ILE118 PRO119 GLU120 ASN121 THR122 PRO123 VAL124 GLY125 THR126 PRO127 ILE128 PHE129 ILE130 VAL131 ASN132 ALA133 THR134 ASP135 PRO136 ASP137 LEU138 GLY139 ALA140 GLY141 GLY142 SER143 VAL144 LEU145 TYR146 SER147 PHE148 GLN149 PRO150 PRO151 SER152 PRO153 PHE154 PHE155 ALA156 ILE157 ASP158 SER159 ALA160 ARG161 GLY162 ILE163 VAL164 THR165 VAL166 ILE167 GLN168 GLU169 LEU170 ASP171 TYR172 GLU173 VAL174 THR175 GLN176 ALA177 TYR178 GLN179 LEU180 THR181 VAL182 ASN183 ALA184 THR185 ASP186 GLN187 ASP188 LYS189 THR190 ARG191 PRO192 LEU193 SER194 THR195 LEU196 ALA197 ASN198 LEU199 ALA200 ILE201 ILE202 ILE203 THR204

Ligands
Unit 5 CA1001 CA1002 CA1003 CL1004
Unit 6 CA1001 CA1002 CA1003 CL1004
Unit 7 CA1001 CA1002 CA1003 CA1004
Unit 8 CA1001 CA1002 CA1003 CA1004

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany