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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF (GCCU(G-LNA)CCUGC)2 DUPLEX
Keywords CCUG REPEATS, RNA DUPLEX, MYOTONIC DYSTROPHY TYPE 2, TAUTOME RESIDUE, 3' OVERHANGING NUCLEOTIDES, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4XW0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 10 183 24
2  DNA/RNA    B 10 166 24
3  Ligand   RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*GP*C)-3')  A 2 0 10
4 Water     22 0 22
total       44 349 80

Nucleic acids
Unit 1 G1 C2 C3 U4 LCG5 C6 C7 U8 G9 C10
Unit 2 G1 C2 C3 U4 LCG5 C6 C7 U8 G9 C10

Ligands
Unit 3 SO4101 SO4102

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany