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Sequence, Chains, Asymmetric and Biological Units

Title COMPLEX STRUCTURE OF THYMIDYLATE SYNTHASE FROM VARICELLA ZOS WITH A PHOSPHORYLATED BVDU
Keywords VZV, THYMIDYLATE SYNTHASE, HERPESVIRUS, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4XSC     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   THYMIDYLATE SYNTHASE  A 263 2127 0
2  Protein   THYMIDYLATE SYNTHASE  B 284 2303 0
3  Protein   THYMIDYLATE SYNTHASE  C 264 2135 0
4  Protein   THYMIDYLATE SYNTHASE  D 282 2288 0
5  Ligand   THYMIDYLATE SYNTHASE  A 2 0 39
6  Ligand   THYMIDYLATE SYNTHASE  B 2 0 30
7  Ligand   THYMIDYLATE SYNTHASE  C 2 0 39
8  Ligand   THYMIDYLATE SYNTHASE  D 2 0 30
9 Water     34 0 34
total       1135 8853 172
Proteins
Unit 1 THR14 LEU15 THR16 GLY17 GLU18 LEU19 GLN20 TYR21 LEU22 LYS23 GLN24 VAL25 ASP26 ASP27 ILE28 LEU29 ARG30 TYR31 GLY32 VAL33 ARG34 LYS35 ARG36 ASP37 ARG38 THR39 GLY40 ILE41 GLY42 THR43 LEU44 SER45 LEU46 PHE47 GLY48 MET49 GLN50 ALA51 ARG52 TYR53 ASN54 LEU55 ARG56 ASN57 GLU58 PHE59 PRO60 LEU61 LEU62 THR63 THR64 LYS65 ARG66 VAL67 PHE68 TRP69 ARG70 ALA71 VAL72 VAL73 GLU74 GLU75 LEU76 LEU77 TRP78 PHE79 ILE80 ARG81 GLY82 SER83 THR84 ASP85 SER86 LYS87 GLU88 LEU89 ALA90 ALA91 LYS92 ASP93 ILE94 HIS95 ILE96 TRP97 ASP98 THR116 GLY117 ASP118 LEU119 GLY120 PRO121 ILE122 TYR123 GLY124 PHE125 GLN126 TRP127 ARG128 HIS129 PHE130 GLY131 ALA132 GLU133 TYR134 LYS135 ASP136 CYS137 GLN138 SER139 ASN140 TYR141 LEU142 GLN143 GLN144 GLY145 ILE146 ASP147 GLN148 LEU149 GLN150 THR151 VAL152 ILE153 ASP154 THR155 ILE156 LYS157 THR158 ASN159 PRO160 GLU161 SER162 ARG163 ARG164 MET165 ILE166 ILE167 SER168 SER169 TRP170 ASN171 PRO172 LYS173 ASP174 ILE175 PRO176 LEU177 MET178 VAL179 LEU180 PRO181 PRO182 CYS183 HIS184 THR185 LEU186 CYS187 GLN188 PHE189 TYR190 VAL191 ALA192 ASN193 GLY194 GLU195 LEU196 SER197 CYS198 GLN199 VAL200 TYR201 GLN202 ARG203 SER204 GLY205 ASP206 MET207 GLY208 LEU209 GLY210 VAL211 PRO212 PHE213 ASN214 ILE215 ALA216 GLY217 TYR218 ALA219 LEU220 LEU221 THR222 TYR223 ILE224 VAL225 ALA226 HIS227 VAL228 THR229 GLY230 LEU231 LYS232 THR233 GLY234 ASP235 LEU236 ILE237 HIS238 THR239 MET240 GLY241 ASP242 ALA243 HIS244 ILE245 TYR246 LEU247 ASN248 HIS249 ILE250 ASP251 ALA252 LEU253 LYS254 VAL255 GLN256 LEU257 ALA258 ARG259 SER260 PRO261 LYS262 PRO263 PHE264 PRO265 CYS266 LEU267 LYS268 ILE269 ILE270 ARG271 ASN272 VAL273 THR274 ASP275 ILE276 ASN277 ASP278 PHE279 LYS280 TRP281 ASP282 ASP283 PHE284 GLN285 LEU286 ASP287 GLY288 TYR289 ASN290 PRO291 HIS292 PRO293
Unit 2 GLY12 PHE13 THR14 LEU15 THR16 GLY17 GLU18 LEU19 GLN20 TYR21 LEU22 LYS23 GLN24 VAL25 ASP26 ASP27 ILE28 LEU29 ARG30 TYR31 GLY32 VAL33 ARG34 LYS35 ARG36 ASP37 ARG38 THR39 GLY40 ILE41 GLY42 THR43 LEU44 SER45 LEU46 PHE47 GLY48 MET49 GLN50 ALA51 ARG52 TYR53 ASN54 LEU55 ARG56 ASN57 GLU58 PHE59 PRO60 LEU61 LEU62 THR63 THR64 LYS65 ARG66 VAL67 PHE68 TRP69 ARG70 ALA71 VAL72 VAL73 GLU74 GLU75 LEU76 LEU77 TRP78 PHE79 ILE80 ARG81 GLY82 SER83 THR84 ASP85 SER86 LYS87 GLU88 LEU89 ALA90 ALA91 LYS92 ASP93 ILE94 HIS95 ILE96 TRP97 ASP98 ILE99 TYR100 GLY101 SER102 SER103 LYS104 PHE105 LEU106 ASN107 ARG108 ASN109 GLY110 PHE111 HIS112 LYS113 ARG114 HIS115 THR116 GLY117 ASP118 LEU119 GLY120 PRO121 ILE122 TYR123 GLY124 PHE125 GLN126 TRP127 ARG128 HIS129 PHE130 GLY131 ALA132 GLU133 TYR134 LYS135 ASP136 CYS137 GLN138 SER139 ASN140 TYR141 LEU142 GLN143 GLN144 GLY145 ILE146 ASP147 GLN148 LEU149 GLN150 THR151 VAL152 ILE153 ASP154 THR155 ILE156 LYS157 THR158 ASN159 PRO160 GLU161 SER162 ARG163 ARG164 MET165 ILE166 ILE167 SER168 SER169 TRP170 ASN171 PRO172 LYS173 ASP174 ILE175 PRO176 LEU177 MET178 VAL179 LEU180 PRO181 PRO182 CYS183 HIS184 THR185 LEU186 CYS187 GLN188 PHE189 TYR190 VAL191 ALA192 ASN193 GLY194 GLU195 LEU196 SER197 CYS198 GLN199 VAL200 TYR201 GLN202 ARG203 SER204 GLY205 ASP206 MET207 GLY208 LEU209 GLY210 VAL211 PRO212 PHE213 ASN214 ILE215 ALA216 GLY217 TYR218 ALA219 LEU220 LEU221 THR222 TYR223 ILE224 VAL225 ALA226 HIS227 VAL228 THR229 GLY230 LEU231 LYS232 THR233 GLY234 ASP235 LEU236 ILE237 HIS238 THR239 MET240 GLY241 ASP242 ALA243 HIS244 ILE245 TYR246 LEU247 ASN248 HIS249 ILE250 ASP251 ALA252 LEU253 LYS254 VAL255 GLN256 LEU257 ALA258 ARG259 SER260 PRO261 LYS262 PRO263 PHE264 PRO265 CYS266 LEU267 LYS268 ILE269 ILE270 ARG271 ASN272 VAL273 THR274 ASP275 ILE276 ASN277 ASP278 PHE279 LYS280 TRP281 ASP282 ASP283 PHE284 GLN285 LEU286 ASP287 GLY288 TYR289 ASN290 PRO291 HIS292 PRO293 PRO294 LEU295
Unit 3 LEU15 THR16 GLY17 GLU18 LEU19 GLN20 TYR21 LEU22 LYS23 GLN24 VAL25 ASP26 ASP27 ILE28 LEU29 ARG30 TYR31 GLY32 VAL33 ARG34 LYS35 ARG36 ASP37 ARG38 THR39 GLY40 ILE41 GLY42 THR43 LEU44 SER45 LEU46 PHE47 GLY48 MET49 GLN50 ALA51 ARG52 TYR53 ASN54 LEU55 ARG56 ASN57 GLU58 PHE59 PRO60 LEU61 LEU62 THR63 THR64 LYS65 ARG66 VAL67 PHE68 TRP69 ARG70 ALA71 VAL72 VAL73 GLU74 GLU75 LEU76 LEU77 TRP78 PHE79 ILE80 ARG81 GLY82 SER83 THR84 ASP85 SER86 LYS87 GLU88 LEU89 ALA90 ALA91 LYS92 ASP93 ILE94 HIS95 ILE96 TRP97 ASP98 THR116 GLY117 ASP118 LEU119 GLY120 PRO121 ILE122 TYR123 GLY124 PHE125 GLN126 TRP127 ARG128 HIS129 PHE130 GLY131 ALA132 GLU133 TYR134 LYS135 ASP136 CYS137 GLN138 SER139 ASN140 TYR141 LEU142 GLN143 GLN144 GLY145 ILE146 ASP147 GLN148 LEU149 GLN150 THR151 VAL152 ILE153 ASP154 THR155 ILE156 LYS157 THR158 ASN159 PRO160 GLU161 SER162 ARG163 ARG164 MET165 ILE166 ILE167 SER168 SER169 TRP170 ASN171 PRO172 LYS173 ASP174 ILE175 PRO176 LEU177 MET178 VAL179 LEU180 PRO181 PRO182 CYS183 HIS184 THR185 LEU186 CYS187 GLN188 PHE189 TYR190 VAL191 ALA192 ASN193 GLY194 GLU195 LEU196 SER197 CYS198 GLN199 VAL200 TYR201 GLN202 ARG203 SER204 GLY205 ASP206 MET207 GLY208 LEU209 GLY210 VAL211 PRO212 PHE213 ASN214 ILE215 ALA216 GLY217 TYR218 ALA219 LEU220 LEU221 THR222 TYR223 ILE224 VAL225 ALA226 HIS227 VAL228 THR229 GLY230 LEU231 LYS232 THR233 GLY234 ASP235 LEU236 ILE237 HIS238 THR239 MET240 GLY241 ASP242 ALA243 HIS244 ILE245 TYR246 LEU247 ASN248 HIS249 ILE250 ASP251 ALA252 LEU253 LYS254 VAL255 GLN256 LEU257 ALA258 ARG259 SER260 PRO261 LYS262 PRO263 PHE264 PRO265 CYS266 LEU267 LYS268 ILE269 ILE270 ARG271 ASN272 VAL273 THR274 ASP275 ILE276 ASN277 ASP278 PHE279 LYS280 TRP281 ASP282 ASP283 PHE284 GLN285 LEU286 ASP287 GLY288 TYR289 ASN290 PRO291 HIS292 PRO293 PRO294 LEU295
Unit 4 THR14 LEU15 THR16 GLY17 GLU18 LEU19 GLN20 TYR21 LEU22 LYS23 GLN24 VAL25 ASP26 ASP27 ILE28 LEU29 ARG30 TYR31 GLY32 VAL33 ARG34 LYS35 ARG36 ASP37 ARG38 THR39 GLY40 ILE41 GLY42 THR43 LEU44 SER45 LEU46 PHE47 GLY48 MET49 GLN50 ALA51 ARG52 TYR53 ASN54 LEU55 ARG56 ASN57 GLU58 PHE59 PRO60 LEU61 LEU62 THR63 THR64 LYS65 ARG66 VAL67 PHE68 TRP69 ARG70 ALA71 VAL72 VAL73 GLU74 GLU75 LEU76 LEU77 TRP78 PHE79 ILE80 ARG81 GLY82 SER83 THR84 ASP85 SER86 LYS87 GLU88 LEU89 ALA90 ALA91 LYS92 ASP93 ILE94 HIS95 ILE96 TRP97 ASP98 ILE99 TYR100 GLY101 SER102 SER103 LYS104 PHE105 LEU106 ASN107 ARG108 ASN109 GLY110 PHE111 HIS112 LYS113 ARG114 HIS115 THR116 GLY117 ASP118 LEU119 GLY120 PRO121 ILE122 TYR123 GLY124 PHE125 GLN126 TRP127 ARG128 HIS129 PHE130 GLY131 ALA132 GLU133 TYR134 LYS135 ASP136 CYS137 GLN138 SER139 ASN140 TYR141 LEU142 GLN143 GLN144 GLY145 ILE146 ASP147 GLN148 LEU149 GLN150 THR151 VAL152 ILE153 ASP154 THR155 ILE156 LYS157 THR158 ASN159 PRO160 GLU161 SER162 ARG163 ARG164 MET165 ILE166 ILE167 SER168 SER169 TRP170 ASN171 PRO172 LYS173 ASP174 ILE175 PRO176 LEU177 MET178 VAL179 LEU180 PRO181 PRO182 CYS183 HIS184 THR185 LEU186 CYS187 GLN188 PHE189 TYR190 VAL191 ALA192 ASN193 GLY194 GLU195 LEU196 SER197 CYS198 GLN199 VAL200 TYR201 GLN202 ARG203 SER204 GLY205 ASP206 MET207 GLY208 LEU209 GLY210 VAL211 PRO212 PHE213 ASN214 ILE215 ALA216 GLY217 TYR218 ALA219 LEU220 LEU221 THR222 TYR223 ILE224 VAL225 ALA226 HIS227 VAL228 THR229 GLY230 LEU231 LYS232 THR233 GLY234 ASP235 LEU236 ILE237 HIS238 THR239 MET240 GLY241 ASP242 ALA243 HIS244 ILE245 TYR246 LEU247 ASN248 HIS249 ILE250 ASP251 ALA252 LEU253 LYS254 VAL255 GLN256 LEU257 ALA258 ARG259 SER260 PRO261 LYS262 PRO263 PHE264 PRO265 CYS266 LEU267 LYS268 ILE269 ILE270 ARG271 ASN272 VAL273 THR274 ASP275 ILE276 ASN277 ASP278 PHE279 LYS280 TRP281 ASP282 ASP283 PHE284 GLN285 LEU286 ASP287 GLY288 TYR289 ASN290 PRO291 HIS292 PRO293 PRO294 LEU295
Ligands
Unit 5 BVP1001 1PE1002
Unit 6 BVP1001 1PE1002
Unit 7 BVP1001 1PE1002
Unit 8 BVP1001 1PE1002
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany