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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THOSEA ASIGNA VIRUS RNA-DEPENDENT RNA P (RDRP) COMPLEXED WITH LU3+
Keywords POLYMERASE, RDRP, VIRUS, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4XHA     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA-DEPENDENT RNA POLYMERASE  A 663 5237 0
2  Protein   RNA-DEPENDENT RNA POLYMERASE  B 662 5239 0
3  Ligand   RNA-DEPENDENT RNA POLYMERASE  A 7 0 49
4  Ligand   RNA-DEPENDENT RNA POLYMERASE  B 5 0 21
total       1337 10476 70
Proteins
Unit 1 PRO10 THR11 ARG12 LEU13 SER14 LEU15 GLU16 ALA17 MET18 LEU19 ALA20 GLU21 ARG22 ALA23 MET24 VAL25 ALA26 ARG27 GLN28 ASP29 LEU30 ALA31 GLY32 LEU33 LYS34 ARG35 LYS36 LEU37 ALA38 GLY39 ALA40 ASP41 ARG42 VAL43 LEU44 ALA45 PRO46 GLN47 SER48 PRO49 GLU50 GLN51 CYS52 GLY53 ARG54 GLU55 SER56 ALA57 GLN58 ALA59 GLN60 ALA61 ARG62 SER63 VAL64 THR65 SER66 GLU67 LEU68 LYS69 SER70 ALA71 VAL72 LYS73 GLU74 ALA75 GLN76 GLY77 LEU78 GLU79 HIS80 GLN81 THR82 LEU83 ASP84 PHE85 LEU86 GLU87 GLN88 LEU89 GLY90 GLU91 TYR92 PRO93 VAL94 CYS95 GLY96 ILE97 LEU98 HIS99 GLY100 ASP101 HIS102 PRO103 VAL104 HIS105 PRO106 SER107 GLY108 THR109 HIS110 ASN111 ASN112 ASN113 GLY114 LYS115 VAL116 SER117 VAL118 LYS119 ARG120 GLN121 PHE122 ALA123 ALA124 GLY125 VAL126 ASN127 THR128 SER129 ASP130 ALA131 LEU132 THR133 CYS134 ALA135 PHE136 ARG137 PHE138 GLU139 ASP140 SER141 ASP142 LEU143 VAL144 ARG145 GLU146 THR147 ALA148 LEU149 LYS150 THR151 THR152 TYR153 THR154 ASP155 GLY156 THR157 TRP158 ALA159 GLY160 PHE161 VAL162 GLN163 ARG164 LEU165 LYS166 MET167 GLN168 THR169 THR170 ARG171 LYS172 CYS173 VAL174 GLN175 GLU176 LYS177 VAL178 SER179 ARG180 LYS181 LEU182 LEU183 LYS184 GLN185 LEU186 PHE187 PRO188 TYR189 ASP190 PRO191 GLN192 LYS193 LEU194 VAL195 ASP196 VAL197 SER198 GLY199 GLU200 LEU201 SER202 GLU203 LEU204 VAL205 LEU206 GLY207 ILE208 LYS209 THR210 ASN211 ALA212 ILE213 ALA214 SER215 ALA216 GLY217 PRO218 PRO219 TYR220 TRP221 ARG222 THR223 LYS224 ARG225 ASP226 ALA227 LEU228 PRO229 ASP230 MET231 LEU232 ASP233 CYS234 VAL235 LEU236 PRO237 LEU238 LEU239 TYR240 ASP241 HIS242 ILE243 VAL244 ARG245 LYS246 ASP247 LEU248 THR249 THR250 LEU251 ARG252 ASN253 LYS254 HIS255 PRO256 GLU257 LEU258 PHE259 LEU260 ALA261 GLU262 CYS263 LYS264 ASN265 LYS266 THR267 ASP268 ARG269 TYR270 GLU271 VAL272 GLU273 SER274 LEU275 GLY276 GLU277 LYS278 THR279 ARG280 PRO281 TYR282 PHE283 SER284 HIS285 PRO286 PHE287 HIS288 LEU289 SER290 ALA291 LEU292 VAL293 SER294 VAL295 LEU296 SER297 GLN298 SER299 PHE300 SER301 GLY302 ALA303 LEU304 LYS305 ILE306 MET307 THR308 GLU309 ASP310 SER311 THR312 SER313 PHE314 ASN315 ALA316 TYR317 GLY318 PHE319 SER320 TRP321 THR322 ASN323 GLY324 GLY325 ALA326 GLU327 ASP328 LEU329 ALA330 ILE331 TRP332 ALA333 ARG334 GLN335 ALA336 GLY337 GLU338 ALA339 GLY340 LYS341 LYS342 PRO343 PRO344 ARG345 ILE346 ALA347 CYS348 TYR349 GLY350 ASP351 ASP352 THR353 ASP354 ILE355 TYR356 TYR357 ARG358 LYS359 ASP360 GLY361 LYS362 LEU363 TYR364 ARG365 ILE366 CYS367 PRO368 ASP369 PHE370 LYS371 GLN372 MET373 ASP374 GLY375 SER376 VAL377 ASP378 ALA379 THR380 THR381 ILE382 GLU383 ALA384 VAL385 VAL386 ASP387 TYR388 VAL389 VAL390 ASP391 ALA392 HIS393 VAL394 LYS395 GLN396 TYR397 PRO398 THR399 ALA400 ARG401 GLN402 PHE403 TRP404 GLU405 GLU406 VAL407 GLY408 LYS409 LEU410 TRP411 VAL412 GLU413 MET414 ALA415 THR416 GLN417 SER418 PRO419 PHE420 LEU421 ILE422 ASP423 GLY424 THR425 LYS426 VAL427 TYR428 ARG429 LYS430 MET431 GLN432 LYS433 ASP434 GLY435 LEU436 MET437 THR438 GLY439 VAL440 VAL441 GLY442 THR443 THR444 LEU445 PHE446 ASP447 THR448 VAL449 LYS450 SER451 ALA452 LEU453 ALA454 TYR455 ASN456 ASP457 TRP458 ALA459 ASP460 GLN461 LEU462 MET463 PHE464 GLY465 SER466 LEU467 ASN468 LEU469 LEU470 GLU471 GLU472 LYS473 TYR474 ALA475 ILE476 GLU477 PHE478 PHE479 LYS480 ASN481 LYS482 HIS483 GLY484 LEU485 VAL486 ILE487 LYS488 GLU489 GLY490 THR491 TRP492 LYS493 PRO494 ALA495 LEU496 VAL497 ASN498 GLU499 ASP500 PRO501 GLY502 PHE503 GLY504 GLU505 LEU506 TRP507 THR508 GLU509 GLN510 LYS511 PHE512 LEU513 GLY514 LEU515 GLN516 LEU517 LYS518 VAL519 VAL520 ARG521 ARG522 GLU523 ASN524 GLU525 LYS526 VAL527 TYR528 VAL529 PRO530 ASN531 LEU532 PRO533 PHE534 GLU535 ASP536 TRP537 LEU538 THR539 MET540 TRP541 VAL542 THR543 PRO544 ARG545 SER546 LYS547 TYR548 ARG549 SER550 LYS551 GLU552 THR553 GLU554 THR555 MET556 ARG557 GLU558 ARG559 THR560 LEU561 PHE562 ASP563 ARG564 ALA565 ARG566 GLY567 LEU568 LEU569 VAL570 THR571 GLY572 ALA573 VAL574 PHE575 ASP576 GLU577 ARG578 ALA579 ARG580 GLY581 LEU582 MET583 GLY584 ALA585 VAL586 ILE587 ASN588 SER589 THR590 ALA591 PRO592 GLU593 VAL594 VAL595 CYS596 MET597 ARG598 VAL599 GLN600 GLU601 GLY602 GLY603 GLY604 ARG605 GLY606 ALA607 PRO608 PRO609 ALA610 TYR611 ALA612 PHE613 LEU614 THR615 ARG616 ASP617 GLY618 VAL619 PHE620 GLU621 PHE622 PRO623 ILE624 SER625 ASP626 GLY627 TYR628 PRO629 SER630 TYR631 ASP632 TRP633 VAL634 VAL635 SER636 LEU637 TYR638 SER639 ARG640 ASP641 HIS642 PRO643 CYS644 ASP645 MET646 PRO647 ARG648 VAL649 PHE650 PRO651 GLU652 ALA653 ALA654 THR655 LEU656 ILE657 ALA658 SER659 TYR660 ARG661 LYS662 GLN663 VAL664 MET665 ASP666 THR667 ARG668 VAL669 VAL670 ILE671 LYS672
Unit 2 PRO10 THR11 ARG12 LEU13 SER14 LEU15 GLU16 ALA17 MET18 LEU19 ALA20 GLU21 ARG22 ALA23 MET24 VAL25 ALA26 ARG27 GLN28 ASP29 LEU30 ALA31 GLY32 LEU33 LYS34 ARG35 LYS36 LEU37 ALA38 GLY39 ALA40 ASP41 ARG42 VAL43 LEU44 ALA45 PRO46 GLN47 SER48 PRO49 GLU50 GLN51 CYS52 GLY53 ARG54 GLU55 SER56 ALA57 GLN58 ALA59 GLN60 ALA61 ARG62 SER63 VAL64 THR65 SER66 GLU67 LEU68 LYS69 SER70 ALA71 VAL72 LYS73 GLU74 ALA75 GLN76 GLY77 LEU78 GLU79 HIS80 GLN81 THR82 LEU83 ASP84 PHE85 LEU86 GLU87 GLN88 LEU89 GLY90 GLU91 TYR92 PRO93 VAL94 CYS95 GLY96 ILE97 LEU98 HIS99 GLY100 ASP101 HIS102 PRO103 VAL104 HIS105 PRO106 SER107 GLY108 THR109 HIS110 ASN111 ASN112 ASN113 GLY114 LYS115 VAL116 SER117 VAL118 LYS119 ARG120 GLN121 PHE122 ALA123 ALA124 GLY125 VAL126 ASN127 THR128 SER129 ASP130 ALA131 LEU132 THR133 CYS134 ALA135 PHE136 ARG137 PHE138 GLU139 ASP140 SER141 ASP142 LEU143 VAL144 ARG145 GLU146 THR147 ALA148 LEU149 LYS150 THR151 THR152 TYR153 THR154 ASP155 GLY156 THR157 TRP158 ALA159 GLY160 PHE161 VAL162 GLN163 ARG164 LEU165 LYS166 MET167 GLN168 THR169 THR170 ARG171 LYS172 CYS173 VAL174 GLN175 GLU176 LYS177 VAL178 SER179 ARG180 LYS181 LEU182 LEU183 LYS184 GLN185 LEU186 PHE187 PRO188 TYR189 ASP190 PRO191 GLN192 LYS193 LEU194 VAL195 ASP196 VAL197 SER198 GLY199 GLU200 LEU201 SER202 GLU203 LEU204 VAL205 LEU206 GLY207 ILE208 LYS209 THR210 ASN211 ALA212 ILE213 ALA214 SER215 ALA216 GLY217 PRO218 PRO219 TYR220 TRP221 ARG222 THR223 LYS224 ARG225 ASP226 ALA227 LEU228 PRO229 ASP230 MET231 LEU232 ASP233 CYS234 VAL235 LEU236 PRO237 LEU238 LEU239 TYR240 ASP241 HIS242 ILE243 VAL244 ARG245 LYS246 ASP247 LEU248 THR249 THR250 LEU251 ARG252 ASN253 LYS254 HIS255 PRO256 GLU257 LEU258 PHE259 LEU260 ALA261 GLU262 CYS263 LYS264 ASN265 LYS266 THR267 ASP268 ARG269 TYR270 GLU271 VAL272 GLU273 SER274 LEU275 GLY276 GLU277 LYS278 THR279 ARG280 PRO281 TYR282 PHE283 SER284 HIS285 PRO286 PHE287 HIS288 LEU289 SER290 ALA291 LEU292 VAL293 SER294 VAL295 LEU296 SER297 GLN298 SER299 PHE300 SER301 GLY302 ALA303 LEU304 LYS305 ILE306 MET307 THR308 GLU309 ASP310 SER311 THR312 SER313 PHE314 ASN315 ALA316 TYR317 GLY318 PHE319 SER320 TRP321 THR322 ASN323 GLY324 GLY325 ALA326 GLU327 ASP328 LEU329 ALA330 ILE331 TRP332 ALA333 ARG334 GLN335 ALA336 GLY337 GLU338 ALA339 GLY340 LYS341 LYS342 PRO343 PRO344 ARG345 ILE346 ALA347 CYS348 TYR349 GLY350 ASP351 ASP352 THR353 ASP354 ILE355 TYR356 TYR357 ARG358 LYS359 ASP360 GLY361 LYS362 LEU363 TYR364 ARG365 ILE366 CYS367 PRO368 ASP369 PHE370 LYS371 GLN372 MET373 ASP374 GLY375 SER376 VAL377 ASP378 ALA379 THR380 THR381 ILE382 GLU383 ALA384 VAL385 VAL386 ASP387 TYR388 VAL389 VAL390 ASP391 ALA392 HIS393 VAL394 LYS395 GLN396 TYR397 PRO398 THR399 ALA400 ARG401 GLN402 PHE403 TRP404 GLU405 GLU406 VAL407 GLY408 LYS409 LEU410 TRP411 VAL412 GLU413 MET414 ALA415 THR416 GLN417 SER418 PRO419 PHE420 LEU421 ILE422 ASP423 GLY424 THR425 LYS426 VAL427 TYR428 ARG429 LYS430 MET431 GLN432 LYS433 ASP434 GLY435 LEU436 MET437 THR438 GLY439 VAL440 VAL441 GLY442 THR443 THR444 LEU445 PHE446 ASP447 THR448 VAL449 LYS450 SER451 ALA452 LEU453 ALA454 TYR455 ASN456 ASP457 TRP458 ALA459 ASP460 GLN461 LEU462 MET463 PHE464 GLY465 SER466 LEU467 ASN468 LEU469 LEU470 GLU471 GLU472 LYS473 TYR474 ALA475 ILE476 GLU477 PHE478 PHE479 LYS480 ASN481 LYS482 HIS483 GLY484 LEU485 VAL486 ILE487 LYS488 GLU489 GLY490 THR491 TRP492 LYS493 PRO494 ALA495 LEU496 VAL497 ASN498 GLU499 ASP500 PRO501 GLY502 PHE503 GLY504 GLU505 LEU506 TRP507 THR508 GLU509 GLN510 LYS511 PHE512 LEU513 GLY514 LEU515 GLN516 LEU517 LYS518 VAL519 VAL520 ARG521 ARG522 GLU523 ASN524 GLU525 LYS526 VAL527 TYR528 VAL529 PRO530 ASN531 LEU532 PRO533 PHE534 GLU535 ASP536 TRP537 LEU538 THR539 MET540 TRP541 VAL542 THR543 PRO544 ARG545 SER546 LYS547 TYR548 ARG549 SER550 LYS551 GLU552 THR553 GLU554 THR555 MET556 ARG557 GLU558 ARG559 THR560 LEU561 PHE562 ASP563 ARG564 ALA565 ARG566 GLY567 LEU568 LEU569 VAL570 THR571 GLY572 ALA573 VAL574 PHE575 ASP576 GLU577 ARG578 ALA579 ARG580 GLY581 LEU582 MET583 GLY584 ALA585 VAL586 ILE587 ASN588 SER589 THR590 ALA591 PRO592 GLU593 VAL594 VAL595 CYS596 MET597 ARG598 VAL599 GLN600 GLU601 GLY602 GLY603 GLY604 ARG605 GLY606 ALA607 PRO608 PRO609 ALA610 TYR611 ALA612 PHE613 LEU614 THR615 ARG616 ASP617 GLY618 VAL619 PHE620 GLU621 PHE622 PRO623 ILE624 SER625 ASP626 GLY627 TYR628 PRO629 SER630 TYR631 ASP632 TRP633 VAL634 VAL635 SER636 LEU637 TYR638 SER639 ARG640 ASP641 HIS642 PRO643 CYS644 ASP645 MET646 PRO647 ARG648 VAL649 PHE650 PRO651 GLU652 ALA653 ALA654 THR655 LEU656 ILE657 ALA658 SER659 TYR660 ARG661 LYS662 GLN663 VAL664 MET665 ASP666 THR667 ARG668 VAL669 VAL670 ILE671
Ligands
Unit 3 LU701 SO4702 SO4703 SO4704 GOL705 GOL706 SO4707
Unit 4 LU701 SO4702 SO4703 SO4704 SO4705
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany