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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTE DESULFOVIBRIO VULGARIS (DEVAL_0042, TARGET EFI-510114) BOUN COPURIFIED (R)-PANTOIC ACID
Keywords TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INIT EFI, STRUCTURAL GENOMICS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4XEQ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT  A 303 4626 136
2  Protein   TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT  B 304 4636 136
3  Protein   TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT  C 302 4601 136
4  Protein   TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT  D 302 4616 136
5  Ligand   TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT  A 1 0 10
6  Ligand   TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT  B 1 0 10
7  Ligand   TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT  C 1 0 10
8  Ligand   TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT  D 1 0 10
9 Water     710 0 710
total       1925 18479 1294

Proteins
Unit 1 ALA37 GLU38 ASP39 ILE40 THR41 LEU42 ALA43 VAL44 VAL45 THR46 LYS47 PRO48 GLY49 SER50 ALA51 GLN52 TYR53 VAL54 CYS55 ALA56 GLU57 ARG58 PHE59 ALA60 GLN61 LEU62 LEU63 ALA64 GLU65 ARG66 SER67 ASP68 LYS69 ARG70 PHE71 ASN72 VAL73 VAL74 LEU75 HIS76 HIS77 SER78 ALA79 SER80 LEU81 GLY82 THR83 GLU84 THR85 ASP86 ILE87 LEU88 GLN89 GLN90 VAL91 GLN92 LEU93 GLY94 ALA95 VAL96 GLN97 MSE98 ALA99 ILE100 VAL101 THR102 THR103 GLY104 THR105 LEU106 ASP107 ALA108 PHE109 VAL110 PRO111 GLU112 MSE113 ALA114 ALA115 LEU116 ASP117 PHE118 PRO119 PHE120 LEU121 PHE122 THR123 ASP124 THR125 THR126 THR127 ALA128 ASP129 ARG130 VAL131 LEU132 ASP133 GLY134 PRO135 VAL136 GLY137 ARG138 GLY139 LEU140 LEU141 ASP142 ARG143 LEU144 SER145 THR146 ALA147 GLY148 PHE149 LYS150 GLY151 LEU152 HIS153 PHE154 SER155 GLU156 ASN157 GLY158 PHE159 ARG160 HIS161 LEU162 THR163 ASN164 SER165 ILE166 ARG167 PRO168 VAL169 MSE170 THR171 PRO172 ASP173 ASP174 VAL175 ARG176 GLY177 LEU178 LYS179 ILE180 ARG181 VAL182 MSE183 GLU184 SER185 GLN186 VAL187 HIS188 ARG189 GLU190 LEU191 TRP192 ARG193 THR194 LEU195 GLY196 ALA197 ASN198 PRO199 THR200 PRO201 MSE202 GLY203 TRP204 PRO205 ILE206 TYR207 ALA208 GLU209 LEU210 GLN211 GLN212 GLY213 THR214 LEU215 ASP216 GLY217 GLN218 GLU219 ASN220 PRO221 LEU222 TRP223 VAL224 ILE225 ALA226 GLU227 TYR228 ARG229 LEU230 ASN231 GLU232 VAL233 GLN234 LYS235 HIS236 LEU237 SER238 LEU239 THR240 GLY241 HIS242 VAL243 TYR244 SER245 THR246 HIS247 THR248 ASP249 LEU250 ALA251 ASN252 LEU253 ALA254 TRP255 PHE256 GLU257 ALA258 LEU259 PRO260 ALA261 ASN262 ASP263 ARG264 ARG265 LEU266 LEU267 ALA268 SER269 CYS270 MSE271 GLN272 ASP273 ALA274 ALA275 LEU276 TRP277 GLN278 ARG279 THR280 TRP281 SER282 ARG283 GLN284 ARG285 ASP286 ALA287 ALA288 TYR289 LEU290 GLU291 GLN292 LEU293 ARG294 THR295 ALA296 GLY297 MSE298 GLN299 VAL300 ILE301 GLU302 ARG303 PRO304 ASP305 ILE306 ALA307 THR308 PHE309 ARG310 GLN311 ARG312 VAL313 GLN314 PRO315 LEU316 SER317 GLY318 SER319 ALA320 LEU321 PHE322 GLU323 HIS324 LYS325 GLY326 VAL327 ARG328 LYS329 ALA330 LEU331 GLU332 ASP333 LEU334 MSE335 ALA336 ALA337 THR338 ARG339
Unit 2 ALA37 GLU38 ASP39 ILE40 THR41 LEU42 ALA43 VAL44 VAL45 THR46 LYS47 PRO48 GLY49 SER50 ALA51 GLN52 TYR53 VAL54 CYS55 ALA56 GLU57 ARG58 PHE59 ALA60 GLN61 LEU62 LEU63 ALA64 GLU65 ARG66 SER67 ASP68 LYS69 ARG70 PHE71 ASN72 VAL73 VAL74 LEU75 HIS76 HIS77 SER78 ALA79 SER80 LEU81 GLY82 THR83 GLU84 THR85 ASP86 ILE87 LEU88 GLN89 GLN90 VAL91 GLN92 LEU93 GLY94 ALA95 VAL96 GLN97 MSE98 ALA99 ILE100 VAL101 THR102 THR103 GLY104 THR105 LEU106 ASP107 ALA108 PHE109 VAL110 PRO111 GLU112 MSE113 ALA114 ALA115 LEU116 ASP117 PHE118 PRO119 PHE120 LEU121 PHE122 THR123 ASP124 THR125 THR126 THR127 ALA128 ASP129 ARG130 VAL131 LEU132 ASP133 GLY134 PRO135 VAL136 GLY137 ARG138 GLY139 LEU140 LEU141 ASP142 ARG143 LEU144 SER145 THR146 ALA147 GLY148 PHE149 LYS150 GLY151 LEU152 HIS153 PHE154 SER155 GLU156 ASN157 GLY158 PHE159 ARG160 HIS161 LEU162 THR163 ASN164 SER165 ILE166 ARG167 PRO168 VAL169 MSE170 THR171 PRO172 ASP173 ASP174 VAL175 ARG176 GLY177 LEU178 LYS179 ILE180 ARG181 VAL182 MSE183 GLU184 SER185 GLN186 VAL187 HIS188 ARG189 GLU190 LEU191 TRP192 ARG193 THR194 LEU195 GLY196 ALA197 ASN198 PRO199 THR200 PRO201 MSE202 GLY203 TRP204 PRO205 ILE206 TYR207 ALA208 GLU209 LEU210 GLN211 GLN212 GLY213 THR214 LEU215 ASP216 GLY217 GLN218 GLU219 ASN220 PRO221 LEU222 TRP223 VAL224 ILE225 ALA226 GLU227 TYR228 ARG229 LEU230 ASN231 GLU232 VAL233 GLN234 LYS235 HIS236 LEU237 SER238 LEU239 THR240 GLY241 HIS242 VAL243 TYR244 SER245 THR246 HIS247 THR248 ASP249 LEU250 ALA251 ASN252 LEU253 ALA254 TRP255 PHE256 GLU257 ALA258 LEU259 PRO260 ALA261 ASN262 ASP263 ARG264 ARG265 LEU266 LEU267 ALA268 SER269 CYS270 MSE271 GLN272 ASP273 ALA274 ALA275 LEU276 TRP277 GLN278 ARG279 THR280 TRP281 SER282 ARG283 GLN284 ARG285 ASP286 ALA287 ALA288 TYR289 LEU290 GLU291 GLN292 LEU293 ARG294 THR295 ALA296 GLY297 MSE298 GLN299 VAL300 ILE301 GLU302 ARG303 PRO304 ASP305 ILE306 ALA307 THR308 PHE309 ARG310 GLN311 ARG312 VAL313 GLN314 PRO315 LEU316 SER317 GLY318 SER319 ALA320 LEU321 PHE322 GLU323 HIS324 LYS325 GLY326 VAL327 ARG328 LYS329 ALA330 LEU331 GLU332 ASP333 LEU334 MSE335 ALA336 ALA337 THR338 ARG339 ALA340
Unit 3 GLU38 ASP39 ILE40 THR41 LEU42 ALA43 VAL44 VAL45 THR46 LYS47 PRO48 GLY49 SER50 ALA51 GLN52 TYR53 VAL54 CYS55 ALA56 GLU57 ARG58 PHE59 ALA60 GLN61 LEU62 LEU63 ALA64 GLU65 ARG66 SER67 ASP68 LYS69 ARG70 PHE71 ASN72 VAL73 VAL74 LEU75 HIS76 HIS77 SER78 ALA79 SER80 LEU81 GLY82 THR83 GLU84 THR85 ASP86 ILE87 LEU88 GLN89 GLN90 VAL91 GLN92 LEU93 GLY94 ALA95 VAL96 GLN97 MSE98 ALA99 ILE100 VAL101 THR102 THR103 GLY104 THR105 LEU106 ASP107 ALA108 PHE109 VAL110 PRO111 GLU112 MSE113 ALA114 ALA115 LEU116 ASP117 PHE118 PRO119 PHE120 LEU121 PHE122 THR123 ASP124 THR125 THR126 THR127 ALA128 ASP129 ARG130 VAL131 LEU132 ASP133 GLY134 PRO135 VAL136 GLY137 ARG138 GLY139 LEU140 LEU141 ASP142 ARG143 LEU144 SER145 THR146 ALA147 GLY148 PHE149 LYS150 GLY151 LEU152 HIS153 PHE154 SER155 GLU156 ASN157 GLY158 PHE159 ARG160 HIS161 LEU162 THR163 ASN164 SER165 ILE166 ARG167 PRO168 VAL169 MSE170 THR171 PRO172 ASP173 ASP174 VAL175 ARG176 GLY177 LEU178 LYS179 ILE180 ARG181 VAL182 MSE183 GLU184 SER185 GLN186 VAL187 HIS188 ARG189 GLU190 LEU191 TRP192 ARG193 THR194 LEU195 GLY196 ALA197 ASN198 PRO199 THR200 PRO201 MSE202 GLY203 TRP204 PRO205 ILE206 TYR207 ALA208 GLU209 LEU210 GLN211 GLN212 GLY213 THR214 LEU215 ASP216 GLY217 GLN218 GLU219 ASN220 PRO221 LEU222 TRP223 VAL224 ILE225 ALA226 GLU227 TYR228 ARG229 LEU230 ASN231 GLU232 VAL233 GLN234 LYS235 HIS236 LEU237 SER238 LEU239 THR240 GLY241 HIS242 VAL243 TYR244 SER245 THR246 HIS247 THR248 ASP249 LEU250 ALA251 ASN252 LEU253 ALA254 TRP255 PHE256 GLU257 ALA258 LEU259 PRO260 ALA261 ASN262 ASP263 ARG264 ARG265 LEU266 LEU267 ALA268 SER269 CYS270 MSE271 GLN272 ASP273 ALA274 ALA275 LEU276 TRP277 GLN278 ARG279 THR280 TRP281 SER282 ARG283 GLN284 ARG285 ASP286 ALA287 ALA288 TYR289 LEU290 GLU291 GLN292 LEU293 ARG294 THR295 ALA296 GLY297 MSE298 GLN299 VAL300 ILE301 GLU302 ARG303 PRO304 ASP305 ILE306 ALA307 THR308 PHE309 ARG310 GLN311 ARG312 VAL313 GLN314 PRO315 LEU316 SER317 GLY318 SER319 ALA320 LEU321 PHE322 GLU323 HIS324 LYS325 GLY326 VAL327 ARG328 LYS329 ALA330 LEU331 GLU332 ASP333 LEU334 MSE335 ALA336 ALA337 THR338 ARG339
Unit 4 GLU38 ASP39 ILE40 THR41 LEU42 ALA43 VAL44 VAL45 THR46 LYS47 PRO48 GLY49 SER50 ALA51 GLN52 TYR53 VAL54 CYS55 ALA56 GLU57 ARG58 PHE59 ALA60 GLN61 LEU62 LEU63 ALA64 GLU65 ARG66 SER67 ASP68 LYS69 ARG70 PHE71 ASN72 VAL73 VAL74 LEU75 HIS76 HIS77 SER78 ALA79 SER80 LEU81 GLY82 THR83 GLU84 THR85 ASP86 ILE87 LEU88 GLN89 GLN90 VAL91 GLN92 LEU93 GLY94 ALA95 VAL96 GLN97 MSE98 ALA99 ILE100 VAL101 THR102 THR103 GLY104 THR105 LEU106 ASP107 ALA108 PHE109 VAL110 PRO111 GLU112 MSE113 ALA114 ALA115 LEU116 ASP117 PHE118 PRO119 PHE120 LEU121 PHE122 THR123 ASP124 THR125 THR126 THR127 ALA128 ASP129 ARG130 VAL131 LEU132 ASP133 GLY134 PRO135 VAL136 GLY137 ARG138 GLY139 LEU140 LEU141 ASP142 ARG143 LEU144 SER145 THR146 ALA147 GLY148 PHE149 LYS150 GLY151 LEU152 HIS153 PHE154 SER155 GLU156 ASN157 GLY158 PHE159 ARG160 HIS161 LEU162 THR163 ASN164 SER165 ILE166 ARG167 PRO168 VAL169 MSE170 THR171 PRO172 ASP173 ASP174 VAL175 ARG176 GLY177 LEU178 LYS179 ILE180 ARG181 VAL182 MSE183 GLU184 SER185 GLN186 VAL187 HIS188 ARG189 GLU190 LEU191 TRP192 ARG193 THR194 LEU195 GLY196 ALA197 ASN198 PRO199 THR200 PRO201 MSE202 GLY203 TRP204 PRO205 ILE206 TYR207 ALA208 GLU209 LEU210 GLN211 GLN212 GLY213 THR214 LEU215 ASP216 GLY217 GLN218 GLU219 ASN220 PRO221 LEU222 TRP223 VAL224 ILE225 ALA226 GLU227 TYR228 ARG229 LEU230 ASN231 GLU232 VAL233 GLN234 LYS235 HIS236 LEU237 SER238 LEU239 THR240 GLY241 HIS242 VAL243 TYR244 SER245 THR246 HIS247 THR248 ASP249 LEU250 ALA251 ASN252 LEU253 ALA254 TRP255 PHE256 GLU257 ALA258 LEU259 PRO260 ALA261 ASN262 ASP263 ARG264 ARG265 LEU266 LEU267 ALA268 SER269 CYS270 MSE271 GLN272 ASP273 ALA274 ALA275 LEU276 TRP277 GLN278 ARG279 THR280 TRP281 SER282 ARG283 GLN284 ARG285 ASP286 ALA287 ALA288 TYR289 LEU290 GLU291 GLN292 LEU293 ARG294 THR295 ALA296 GLY297 MSE298 GLN299 VAL300 ILE301 GLU302 ARG303 PRO304 ASP305 ILE306 ALA307 THR308 PHE309 ARG310 GLN311 ARG312 VAL313 GLN314 PRO315 LEU316 SER317 GLY318 SER319 ALA320 LEU321 PHE322 GLU323 HIS324 LYS325 GLY326 VAL327 ARG328 LYS329 ALA330 LEU331 GLU332 ASP333 LEU334 MSE335 ALA336 ALA337 THR338 ARG339

Ligands
Unit 5 PAF401
Unit 6 PAF401
Unit 7 PAF401
Unit 8 PAF401

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany