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Sequence, Chains, Asymmetric and Biological Units

Title VIBRIO CHOLERAE O395 RIBOKINASE COMPLEXED WITH ADP, RIBOSE A ION.
Keywords KINASE, PHOSPHOTRANSFER, SUGAR BINDING PROTEIN, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4XCK     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RIBOKINASE  A 306 2250 0
2  Protein   RIBOKINASE  B 306 2250 0
3  Protein   RIBOKINASE  C 306 2250 0
4  Protein   RIBOKINASE  D 306 2250 0
5  Ligand   RIBOKINASE  A 3 0 38
6  Ligand   RIBOKINASE  B 3 0 55
7  Ligand   RIBOKINASE  C 3 0 38
8  Ligand   RIBOKINASE  D 2 0 28
9 Water     248 0 248
total       1483 9000 407
Proteins
Unit 1 MET1 ASN2 LYS3 LEU4 VAL5 VAL6 LEU7 GLY8 SER9 VAL10 ASN11 ALA12 ASP13 HIS14 VAL15 LEU16 GLN17 VAL18 PRO19 SER20 PHE21 PRO22 ARG23 PRO24 GLY25 GLU26 THR27 LEU28 HIS29 GLY30 ARG31 ASN32 TYR33 GLN34 VAL35 ILE36 PRO37 GLY38 GLY39 LYS40 GLY41 ALA42 ASN43 GLN44 ALA45 VAL46 ALA47 ALA48 ALA49 ARG50 MET51 GLN52 ALA53 ASP54 VAL55 GLY56 PHE57 ILE58 ALA59 CYS60 VAL61 GLY62 ASP63 ASP64 SER65 PHE66 GLY67 ILE68 ASN69 ILE70 ARG71 GLU72 SER73 PHE74 LYS75 LEU76 ASP77 GLY78 ILE79 ASN80 THR81 ALA82 GLY83 VAL84 LYS85 LEU86 GLN87 PRO88 ASN89 CYS90 PRO91 THR92 GLY93 ILE94 ALA95 MET96 ILE97 GLN98 VAL99 SER100 ASP101 SER102 GLY103 GLU104 ASN105 SER106 ILE107 CYS108 ILE109 SER110 ALA111 GLU112 ALA113 ASN114 ALA115 LYS116 LEU117 THR118 ALA119 ALA120 ALA121 ILE122 GLU123 PRO124 ASP125 LEU126 ALA127 ALA128 ILE129 ARG130 ASP131 ALA132 ARG133 TYR134 LEU135 LEU136 MET137 GLN138 LEU139 GLU140 THR141 PRO142 LEU143 ASP144 GLY145 ILE146 LEU147 LYS148 ALA149 ALA150 GLN151 GLU152 ALA153 LYS154 THR155 ALA156 LYS157 THR158 ASN159 VAL160 ILE161 LEU162 ASN163 PRO164 ALA165 PRO166 ALA167 ARG168 GLU169 LEU170 PRO171 ASP172 GLU173 LEU174 LEU175 LYS176 CYS177 VAL178 ASP179 LEU180 ILE181 THR182 PRO183 ASN184 GLU185 THR186 GLU187 ALA188 GLU189 VAL190 LEU191 THR192 GLY193 ILE194 THR195 VAL196 TYR197 ASP198 ASP199 SER200 SER201 ALA202 GLN203 GLN204 ALA205 ALA206 ASP207 ALA208 LEU209 HIS210 CYS211 LYS212 GLY213 ILE214 GLU215 ILE216 VAL217 ILE218 ILE219 THR220 LEU221 GLY222 SER223 LYS224 GLY225 VAL226 TRP227 LEU228 SER229 GLN230 ASN231 GLY232 ARG233 GLY234 GLN235 ARG236 ILE237 PRO238 GLY239 PHE240 VAL241 VAL242 LYS243 ALA244 THR245 ASP246 THR247 THR248 ALA249 ALA250 GLY251 ASP252 THR253 PHE254 ASN255 GLY256 ALA257 LEU258 VAL259 THR260 GLY261 LEU262 LEU263 GLN264 GLU265 MET266 PRO267 LEU268 GLU269 SER270 ALA271 ILE272 LYS273 PHE274 ALA275 HIS276 ALA277 ALA278 ALA279 ALA280 ILE281 SER282 VAL283 THR284 ARG285 PHE286 GLY287 ALA288 GLN289 THR290 SER291 ILE292 PRO293 THR294 ARG295 ALA296 GLU297 VAL298 GLU299 ALA300 PHE301 LEU302 ALA303 GLU304 HIS305 SER306
Unit 2 MET1 ASN2 LYS3 LEU4 VAL5 VAL6 LEU7 GLY8 SER9 VAL10 ASN11 ALA12 ASP13 HIS14 VAL15 LEU16 GLN17 VAL18 PRO19 SER20 PHE21 PRO22 ARG23 PRO24 GLY25 GLU26 THR27 LEU28 HIS29 GLY30 ARG31 ASN32 TYR33 GLN34 VAL35 ILE36 PRO37 GLY38 GLY39 LYS40 GLY41 ALA42 ASN43 GLN44 ALA45 VAL46 ALA47 ALA48 ALA49 ARG50 MET51 GLN52 ALA53 ASP54 VAL55 GLY56 PHE57 ILE58 ALA59 CYS60 VAL61 GLY62 ASP63 ASP64 SER65 PHE66 GLY67 ILE68 ASN69 ILE70 ARG71 GLU72 SER73 PHE74 LYS75 LEU76 ASP77 GLY78 ILE79 ASN80 THR81 ALA82 GLY83 VAL84 LYS85 LEU86 GLN87 PRO88 ASN89 CYS90 PRO91 THR92 GLY93 ILE94 ALA95 MET96 ILE97 GLN98 VAL99 SER100 ASP101 SER102 GLY103 GLU104 ASN105 SER106 ILE107 CYS108 ILE109 SER110 ALA111 GLU112 ALA113 ASN114 ALA115 LYS116 LEU117 THR118 ALA119 ALA120 ALA121 ILE122 GLU123 PRO124 ASP125 LEU126 ALA127 ALA128 ILE129 ARG130 ASP131 ALA132 ARG133 TYR134 LEU135 LEU136 MET137 GLN138 LEU139 GLU140 THR141 PRO142 LEU143 ASP144 GLY145 ILE146 LEU147 LYS148 ALA149 ALA150 GLN151 GLU152 ALA153 LYS154 THR155 ALA156 LYS157 THR158 ASN159 VAL160 ILE161 LEU162 ASN163 PRO164 ALA165 PRO166 ALA167 ARG168 GLU169 LEU170 PRO171 ASP172 GLU173 LEU174 LEU175 LYS176 CYS177 VAL178 ASP179 LEU180 ILE181 THR182 PRO183 ASN184 GLU185 THR186 GLU187 ALA188 GLU189 VAL190 LEU191 THR192 GLY193 ILE194 THR195 VAL196 TYR197 ASP198 ASP199 SER200 SER201 ALA202 GLN203 GLN204 ALA205 ALA206 ASP207 ALA208 LEU209 HIS210 CYS211 LYS212 GLY213 ILE214 GLU215 ILE216 VAL217 ILE218 ILE219 THR220 LEU221 GLY222 SER223 LYS224 GLY225 VAL226 TRP227 LEU228 SER229 GLN230 ASN231 GLY232 ARG233 GLY234 GLN235 ARG236 ILE237 PRO238 GLY239 PHE240 VAL241 VAL242 LYS243 ALA244 THR245 ASP246 THR247 THR248 ALA249 ALA250 GLY251 ASP252 THR253 PHE254 ASN255 GLY256 ALA257 LEU258 VAL259 THR260 GLY261 LEU262 LEU263 GLN264 GLU265 MET266 PRO267 LEU268 GLU269 SER270 ALA271 ILE272 LYS273 PHE274 ALA275 HIS276 ALA277 ALA278 ALA279 ALA280 ILE281 SER282 VAL283 THR284 ARG285 PHE286 GLY287 ALA288 GLN289 THR290 SER291 ILE292 PRO293 THR294 ARG295 ALA296 GLU297 VAL298 GLU299 ALA300 PHE301 LEU302 ALA303 GLU304 HIS305 SER306
Unit 3 MET1 ASN2 LYS3 LEU4 VAL5 VAL6 LEU7 GLY8 SER9 VAL10 ASN11 ALA12 ASP13 HIS14 VAL15 LEU16 GLN17 VAL18 PRO19 SER20 PHE21 PRO22 ARG23 PRO24 GLY25 GLU26 THR27 LEU28 HIS29 GLY30 ARG31 ASN32 TYR33 GLN34 VAL35 ILE36 PRO37 GLY38 GLY39 LYS40 GLY41 ALA42 ASN43 GLN44 ALA45 VAL46 ALA47 ALA48 ALA49 ARG50 MET51 GLN52 ALA53 ASP54 VAL55 GLY56 PHE57 ILE58 ALA59 CYS60 VAL61 GLY62 ASP63 ASP64 SER65 PHE66 GLY67 ILE68 ASN69 ILE70 ARG71 GLU72 SER73 PHE74 LYS75 LEU76 ASP77 GLY78 ILE79 ASN80 THR81 ALA82 GLY83 VAL84 LYS85 LEU86 GLN87 PRO88 ASN89 CYS90 PRO91 THR92 GLY93 ILE94 ALA95 MET96 ILE97 GLN98 VAL99 SER100 ASP101 SER102 GLY103 GLU104 ASN105 SER106 ILE107 CYS108 ILE109 SER110 ALA111 GLU112 ALA113 ASN114 ALA115 LYS116 LEU117 THR118 ALA119 ALA120 ALA121 ILE122 GLU123 PRO124 ASP125 LEU126 ALA127 ALA128 ILE129 ARG130 ASP131 ALA132 ARG133 TYR134 LEU135 LEU136 MET137 GLN138 LEU139 GLU140 THR141 PRO142 LEU143 ASP144 GLY145 ILE146 LEU147 LYS148 ALA149 ALA150 GLN151 GLU152 ALA153 LYS154 THR155 ALA156 LYS157 THR158 ASN159 VAL160 ILE161 LEU162 ASN163 PRO164 ALA165 PRO166 ALA167 ARG168 GLU169 LEU170 PRO171 ASP172 GLU173 LEU174 LEU175 LYS176 CYS177 VAL178 ASP179 LEU180 ILE181 THR182 PRO183 ASN184 GLU185 THR186 GLU187 ALA188 GLU189 VAL190 LEU191 THR192 GLY193 ILE194 THR195 VAL196 TYR197 ASP198 ASP199 SER200 SER201 ALA202 GLN203 GLN204 ALA205 ALA206 ASP207 ALA208 LEU209 HIS210 CYS211 LYS212 GLY213 ILE214 GLU215 ILE216 VAL217 ILE218 ILE219 THR220 LEU221 GLY222 SER223 LYS224 GLY225 VAL226 TRP227 LEU228 SER229 GLN230 ASN231 GLY232 ARG233 GLY234 GLN235 ARG236 ILE237 PRO238 GLY239 PHE240 VAL241 VAL242 LYS243 ALA244 THR245 ASP246 THR247 THR248 ALA249 ALA250 GLY251 ASP252 THR253 PHE254 ASN255 GLY256 ALA257 LEU258 VAL259 THR260 GLY261 LEU262 LEU263 GLN264 GLU265 MET266 PRO267 LEU268 GLU269 SER270 ALA271 ILE272 LYS273 PHE274 ALA275 HIS276 ALA277 ALA278 ALA279 ALA280 ILE281 SER282 VAL283 THR284 ARG285 PHE286 GLY287 ALA288 GLN289 THR290 SER291 ILE292 PRO293 THR294 ARG295 ALA296 GLU297 VAL298 GLU299 ALA300 PHE301 LEU302 ALA303 GLU304 HIS305 SER306
Unit 4 MET1 ASN2 LYS3 LEU4 VAL5 VAL6 LEU7 GLY8 SER9 VAL10 ASN11 ALA12 ASP13 HIS14 VAL15 LEU16 GLN17 VAL18 PRO19 SER20 PHE21 PRO22 ARG23 PRO24 GLY25 GLU26 THR27 LEU28 HIS29 GLY30 ARG31 ASN32 TYR33 GLN34 VAL35 ILE36 PRO37 GLY38 GLY39 LYS40 GLY41 ALA42 ASN43 GLN44 ALA45 VAL46 ALA47 ALA48 ALA49 ARG50 MET51 GLN52 ALA53 ASP54 VAL55 GLY56 PHE57 ILE58 ALA59 CYS60 VAL61 GLY62 ASP63 ASP64 SER65 PHE66 GLY67 ILE68 ASN69 ILE70 ARG71 GLU72 SER73 PHE74 LYS75 LEU76 ASP77 GLY78 ILE79 ASN80 THR81 ALA82 GLY83 VAL84 LYS85 LEU86 GLN87 PRO88 ASN89 CYS90 PRO91 THR92 GLY93 ILE94 ALA95 MET96 ILE97 GLN98 VAL99 SER100 ASP101 SER102 GLY103 GLU104 ASN105 SER106 ILE107 CYS108 ILE109 SER110 ALA111 GLU112 ALA113 ASN114 ALA115 LYS116 LEU117 THR118 ALA119 ALA120 ALA121 ILE122 GLU123 PRO124 ASP125 LEU126 ALA127 ALA128 ILE129 ARG130 ASP131 ALA132 ARG133 TYR134 LEU135 LEU136 MET137 GLN138 LEU139 GLU140 THR141 PRO142 LEU143 ASP144 GLY145 ILE146 LEU147 LYS148 ALA149 ALA150 GLN151 GLU152 ALA153 LYS154 THR155 ALA156 LYS157 THR158 ASN159 VAL160 ILE161 LEU162 ASN163 PRO164 ALA165 PRO166 ALA167 ARG168 GLU169 LEU170 PRO171 ASP172 GLU173 LEU174 LEU175 LYS176 CYS177 VAL178 ASP179 LEU180 ILE181 THR182 PRO183 ASN184 GLU185 THR186 GLU187 ALA188 GLU189 VAL190 LEU191 THR192 GLY193 ILE194 THR195 VAL196 TYR197 ASP198 ASP199 SER200 SER201 ALA202 GLN203 GLN204 ALA205 ALA206 ASP207 ALA208 LEU209 HIS210 CYS211 LYS212 GLY213 ILE214 GLU215 ILE216 VAL217 ILE218 ILE219 THR220 LEU221 GLY222 SER223 LYS224 GLY225 VAL226 TRP227 LEU228 SER229 GLN230 ASN231 GLY232 ARG233 GLY234 GLN235 ARG236 ILE237 PRO238 GLY239 PHE240 VAL241 VAL242 LYS243 ALA244 THR245 ASP246 THR247 THR248 ALA249 ALA250 GLY251 ASP252 THR253 PHE254 ASN255 GLY256 ALA257 LEU258 VAL259 THR260 GLY261 LEU262 LEU263 GLN264 GLU265 MET266 PRO267 LEU268 GLU269 SER270 ALA271 ILE272 LYS273 PHE274 ALA275 HIS276 ALA277 ALA278 ALA279 ALA280 ILE281 SER282 VAL283 THR284 ARG285 PHE286 GLY287 ALA288 GLN289 THR290 SER291 ILE292 PRO293 THR294 ARG295 ALA296 GLU297 VAL298 GLU299 ALA300 PHE301 LEU302 ALA303 GLU304 HIS305 SER306
Ligands
Unit 5 RIB401 ADP402 CS403
Unit 6 ADP401 ADP402 CS403
Unit 7 RIB401 ADP402 CS403
Unit 8 ADP401 CS402
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany