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Sequence, Chains, Asymmetric and Biological Units

Title TERNARY COMPLEX OF HUMAN DNA POLYMERASE THETA C-TERMINAL DOM BINDING DDGTP OPPOSITE DCMP
Keywords DNA POLYMERASE, TRANSFERASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4X0Q     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA POLYMERASE THETA  A 625 4963 0
2  Protein   DNA POLYMERASE THETA  B 625 4963 0
3  Other macromolecule    E 13 263 0
4  Other macromolecule   DNA (5'-D(P*CP*TP*GP*TP*CP*AP*TP*TP*G)-3')  F 9 182 0
5  Other macromolecule    G 13 263 0
6  Other macromolecule   DNA (5'-D(P*CP*TP*GP*TP*CP*AP*TP*TP*G)-3')  H 9 182 0
7  Ligand   DNA POLYMERASE THETA  A 4 0 43
8  Ligand   DNA POLYMERASE THETA  B 4 0 43
total       1302 10816 86
Proteins
Unit 1 SER1824 LEU1825 SER1826 ILE1827 ILE1828 ASP1829 VAL1830 ALA1831 SER1832 ASP1833 GLN1834 ASN1835 LEU1836 PHE1837 GLN1838 THR1839 PHE1840 ILE1841 LYS1842 GLU1843 TRP1844 ARG1845 CYS1846 LYS1847 LYS1848 ARG1849 PHE1850 SER1851 ILE1852 SER1853 LEU1854 ALA1855 CYS1856 GLU1857 LYS1858 ILE1859 ARG1860 ASP1896 ASP1897 THR1898 LEU1899 VAL1900 VAL1901 GLY1902 LEU1903 ALA1904 VAL1905 CYS1906 TRP1907 GLY1908 GLY1909 ARG1910 ASP1911 ALA1912 TYR1913 TYR1914 PHE1915 SER1916 LEU1917 LEU1935 ASP1936 PRO1937 SER1938 LEU1939 THR1940 LEU1941 LYS1942 ASP1943 ARG1944 MET1945 TRP1946 TYR1947 LEU1948 GLN1949 SER1950 CYS1951 LEU1952 ARG1953 LYS1954 GLU1955 SER1956 ASP1957 LYS1958 GLU1959 CYS1960 SER1961 VAL1962 VAL1963 ILE1964 TYR1965 ASP1966 PHE1967 ILE1968 GLN1969 SER1970 TYR1971 LYS1972 ILE1973 LEU1974 LEU1975 LEU1976 SER1977 CYS1978 GLY1979 ILE1980 SER1981 LEU1982 GLU1983 GLN1984 SER1985 TYR1986 GLU1987 ASP1988 PRO1989 LYS1990 VAL1991 ALA1992 CYS1993 TRP1994 LEU1995 LEU1996 ASP1997 PRO1998 ASP1999 SER2000 GLN2001 GLU2002 PRO2003 THR2004 LEU2005 HIS2006 SER2007 ILE2008 VAL2009 THR2010 SER2011 PHE2012 LEU2013 PRO2014 HIS2015 GLU2016 LEU2017 PRO2018 LEU2019 LEU2020 GLU2021 GLY2022 MET2023 GLU2024 THR2025 SER2026 GLN2027 GLY2028 ILE2029 GLN2030 SER2031 LEU2032 GLY2033 LEU2034 ASN2035 ALA2036 GLY2037 SER2038 GLU2039 HIS2040 SER2041 GLY2042 ARG2043 TYR2044 ARG2045 ALA2046 SER2047 VAL2048 GLU2049 SER2050 ILE2051 LEU2052 ILE2053 PHE2054 ASN2055 SER2056 MET2057 ASN2058 GLN2059 LEU2060 ASN2061 SER2062 LEU2063 LEU2064 GLN2065 LYS2066 GLU2067 ASN2068 LEU2069 GLN2070 ASP2071 VAL2072 PHE2073 ARG2074 LYS2075 VAL2076 GLU2077 MET2078 PRO2079 SER2080 GLN2081 TYR2082 CYS2083 LEU2084 ALA2085 LEU2086 LEU2087 GLU2088 LEU2089 ASN2090 GLY2091 ILE2092 GLY2093 PHE2094 SER2095 THR2096 ALA2097 GLU2098 CYS2099 GLU2100 SER2101 GLN2102 LYS2103 HIS2104 ILE2105 MET2106 GLN2107 ALA2108 LYS2109 LEU2110 ASP2111 ALA2112 ILE2113 GLU2114 THR2115 GLN2116 ALA2117 TYR2118 GLN2119 LEU2120 ALA2121 GLY2122 HIS2123 SER2124 PHE2125 SER2126 PHE2127 THR2128 SER2129 SER2130 ASP2131 ASP2132 ILE2133 ALA2134 GLU2135 VAL2136 LEU2137 PHE2138 LEU2139 GLU2140 LEU2141 LYS2142 LEU2143 PRO2144 PRO2145 GLN2176 PHE2177 SER2178 THR2179 SER2180 LYS2181 ASP2182 VAL2183 LEU2184 ASN2185 LYS2186 LEU2187 LYS2188 ALA2189 LEU2190 HIS2191 PRO2192 LEU2193 PRO2194 GLY2195 LEU2196 ILE2197 LEU2198 GLU2199 TRP2200 ARG2201 ARG2202 ILE2203 THR2204 ASN2205 ALA2206 ILE2207 THR2208 LYS2209 VAL2210 VAL2211 PHE2212 PRO2213 LEU2214 GLN2215 ARG2216 GLU2217 LYS2218 CYS2219 LEU2220 ASN2221 PRO2222 PHE2223 LEU2224 GLY2225 MET2226 GLU2227 ARG2228 ILE2229 TYR2230 PRO2231 VAL2232 SER2233 GLN2234 SER2235 HIS2236 THR2237 ALA2238 THR2239 GLY2240 ARG2241 ILE2242 THR2243 PHE2244 THR2245 GLU2246 PRO2247 ASN2248 ILE2249 GLN2250 ASN2251 VAL2252 PRO2253 ARG2254 ASP2255 PHE2256 GLU2257 ILE2258 LYS2259 MET2260 GLY2307 MET2308 PRO2309 PHE2310 SER2311 ILE2312 SER2313 MET2314 ARG2315 HIS2316 ALA2317 PHE2318 VAL2319 PRO2320 PHE2321 PRO2322 GLY2323 GLY2324 SER2325 ILE2326 LEU2327 ALA2328 ALA2329 ASP2330 TYR2331 SER2332 GLN2333 LEU2334 GLU2335 LEU2336 ARG2337 ILE2338 LEU2339 ALA2340 HIS2341 LEU2342 SER2343 HIS2344 ASP2345 ARG2346 ARG2347 LEU2348 ILE2349 GLN2350 VAL2351 LEU2352 ASN2353 THR2354 GLY2355 ALA2356 ASP2357 VAL2358 PHE2359 ARG2360 SER2361 ILE2362 ALA2363 ALA2364 GLU2365 TRP2366 LYS2367 MET2368 ILE2369 GLU2370 PRO2371 GLU2372 SER2373 VAL2374 GLY2375 ASP2376 ASP2377 LEU2378 ARG2379 GLN2380 GLN2381 ALA2382 LYS2383 GLN2384 ILE2385 CYS2386 TYR2387 GLY2388 ILE2389 ILE2390 TYR2391 GLY2392 MET2393 GLY2394 ALA2395 LYS2396 SER2397 LEU2398 GLY2399 GLU2400 GLN2401 MET2402 GLY2403 ILE2404 LYS2405 GLU2406 ASN2407 ASP2408 ALA2409 ALA2410 CYS2411 TYR2412 ILE2413 ASP2414 SER2415 PHE2416 LYS2417 SER2418 ARG2419 TYR2420 THR2421 GLY2422 ILE2423 ASN2424 GLN2425 PHE2426 MET2427 THR2428 GLU2429 THR2430 VAL2431 LYS2432 ASN2433 CYS2434 LYS2435 ARG2436 ASP2437 GLY2438 PHE2439 VAL2440 GLN2441 THR2442 ILE2443 LEU2444 GLY2445 ARG2446 ARG2447 ARG2448 TYR2449 LEU2450 PRO2451 GLY2452 ILE2453 LYS2454 ASP2455 ASN2456 ASN2457 PRO2458 TYR2459 ARG2460 LYS2461 ALA2462 HIS2463 ALA2464 GLU2465 ARG2466 GLN2467 ALA2468 ILE2469 ASN2470 THR2471 ILE2472 VAL2473 GLN2474 GLY2475 SER2476 ALA2477 ALA2478 ASP2479 ILE2480 VAL2481 LYS2482 ILE2483 ALA2484 THR2485 VAL2486 ASN2487 ILE2488 GLN2489 LYS2490 GLN2491 LEU2492 GLU2493 THR2494 PHE2495 HIS2496 SER2497 THR2498 PHE2499 LYS2500 SER2501 HIS2502 GLY2503 HIS2504 ARG2505 GLU2506 GLY2507 MET2508 LEU2509 GLN2510 SER2511 ASP2512 CYS2527 PRO2528 ILE2529 ARG2530 GLY2531 GLY2532 PHE2533 PHE2534 ILE2535 LEU2536 GLN2537 LEU2538 HIS2539 ASP2540 GLU2541 LEU2542 LEU2543 TYR2544 GLU2545 VAL2546 ALA2547 GLU2548 GLU2549 ASP2550 VAL2551 VAL2552 GLN2553 VAL2554 ALA2555 GLN2556 ILE2557 VAL2558 LYS2559 ASN2560 GLU2561 MET2562 GLU2563 SER2564 ALA2565 VAL2566 LYS2567 LEU2568 SER2569 VAL2570 LYS2571 LEU2572 LYS2573 VAL2574 LYS2575 VAL2576 LYS2577 ILE2578 GLY2579 ALA2580 SER2581 TRP2582 GLY2583 GLU2584 LEU2585 LYS2586 ASP2587 PHE2588 ASP2589 VAL2590
Unit 2 SER1824 LEU1825 SER1826 ILE1827 ILE1828 ASP1829 VAL1830 ALA1831 SER1832 ASP1833 GLN1834 ASN1835 LEU1836 PHE1837 GLN1838 THR1839 PHE1840 ILE1841 LYS1842 GLU1843 TRP1844 ARG1845 CYS1846 LYS1847 LYS1848 ARG1849 PHE1850 SER1851 ILE1852 SER1853 LEU1854 ALA1855 CYS1856 GLU1857 LYS1858 ILE1859 ARG1860 ASP1896 ASP1897 THR1898 LEU1899 VAL1900 VAL1901 GLY1902 LEU1903 ALA1904 VAL1905 CYS1906 TRP1907 GLY1908 GLY1909 ARG1910 ASP1911 ALA1912 TYR1913 TYR1914 PHE1915 SER1916 LEU1917 LEU1935 ASP1936 PRO1937 SER1938 LEU1939 THR1940 LEU1941 LYS1942 ASP1943 ARG1944 MET1945 TRP1946 TYR1947 LEU1948 GLN1949 SER1950 CYS1951 LEU1952 ARG1953 LYS1954 GLU1955 SER1956 ASP1957 LYS1958 GLU1959 CYS1960 SER1961 VAL1962 VAL1963 ILE1964 TYR1965 ASP1966 PHE1967 ILE1968 GLN1969 SER1970 TYR1971 LYS1972 ILE1973 LEU1974 LEU1975 LEU1976 SER1977 CYS1978 GLY1979 ILE1980 SER1981 LEU1982 GLU1983 GLN1984 SER1985 TYR1986 GLU1987 ASP1988 PRO1989 LYS1990 VAL1991 ALA1992 CYS1993 TRP1994 LEU1995 LEU1996 ASP1997 PRO1998 ASP1999 SER2000 GLN2001 GLU2002 PRO2003 THR2004 LEU2005 HIS2006 SER2007 ILE2008 VAL2009 THR2010 SER2011 PHE2012 LEU2013 PRO2014 HIS2015 GLU2016 LEU2017 PRO2018 LEU2019 LEU2020 GLU2021 GLY2022 MET2023 GLU2024 THR2025 SER2026 GLN2027 GLY2028 ILE2029 GLN2030 SER2031 LEU2032 GLY2033 LEU2034 ASN2035 ALA2036 GLY2037 SER2038 GLU2039 HIS2040 SER2041 GLY2042 ARG2043 TYR2044 ARG2045 ALA2046 SER2047 VAL2048 GLU2049 SER2050 ILE2051 LEU2052 ILE2053 PHE2054 ASN2055 SER2056 MET2057 ASN2058 GLN2059 LEU2060 ASN2061 SER2062 LEU2063 LEU2064 GLN2065 LYS2066 GLU2067 ASN2068 LEU2069 GLN2070 ASP2071 VAL2072 PHE2073 ARG2074 LYS2075 VAL2076 GLU2077 MET2078 PRO2079 SER2080 GLN2081 TYR2082 CYS2083 LEU2084 ALA2085 LEU2086 LEU2087 GLU2088 LEU2089 ASN2090 GLY2091 ILE2092 GLY2093 PHE2094 SER2095 THR2096 ALA2097 GLU2098 CYS2099 GLU2100 SER2101 GLN2102 LYS2103 HIS2104 ILE2105 MET2106 GLN2107 ALA2108 LYS2109 LEU2110 ASP2111 ALA2112 ILE2113 GLU2114 THR2115 GLN2116 ALA2117 TYR2118 GLN2119 LEU2120 ALA2121 GLY2122 HIS2123 SER2124 PHE2125 SER2126 PHE2127 THR2128 SER2129 SER2130 ASP2131 ASP2132 ILE2133 ALA2134 GLU2135 VAL2136 LEU2137 PHE2138 LEU2139 GLU2140 LEU2141 LYS2142 LEU2143 PRO2144 PRO2145 GLN2176 PHE2177 SER2178 THR2179 SER2180 LYS2181 ASP2182 VAL2183 LEU2184 ASN2185 LYS2186 LEU2187 LYS2188 ALA2189 LEU2190 HIS2191 PRO2192 LEU2193 PRO2194 GLY2195 LEU2196 ILE2197 LEU2198 GLU2199 TRP2200 ARG2201 ARG2202 ILE2203 THR2204 ASN2205 ALA2206 ILE2207 THR2208 LYS2209 VAL2210 VAL2211 PHE2212 PRO2213 LEU2214 GLN2215 ARG2216 GLU2217 LYS2218 CYS2219 LEU2220 ASN2221 PRO2222 PHE2223 LEU2224 GLY2225 MET2226 GLU2227 ARG2228 ILE2229 TYR2230 PRO2231 VAL2232 SER2233 GLN2234 SER2235 HIS2236 THR2237 ALA2238 THR2239 GLY2240 ARG2241 ILE2242 THR2243 PHE2244 THR2245 GLU2246 PRO2247 ASN2248 ILE2249 GLN2250 ASN2251 VAL2252 PRO2253 ARG2254 ASP2255 PHE2256 GLU2257 ILE2258 LYS2259 MET2260 GLY2307 MET2308 PRO2309 PHE2310 SER2311 ILE2312 SER2313 MET2314 ARG2315 HIS2316 ALA2317 PHE2318 VAL2319 PRO2320 PHE2321 PRO2322 GLY2323 GLY2324 SER2325 ILE2326 LEU2327 ALA2328 ALA2329 ASP2330 TYR2331 SER2332 GLN2333 LEU2334 GLU2335 LEU2336 ARG2337 ILE2338 LEU2339 ALA2340 HIS2341 LEU2342 SER2343 HIS2344 ASP2345 ARG2346 ARG2347 LEU2348 ILE2349 GLN2350 VAL2351 LEU2352 ASN2353 THR2354 GLY2355 ALA2356 ASP2357 VAL2358 PHE2359 ARG2360 SER2361 ILE2362 ALA2363 ALA2364 GLU2365 TRP2366 LYS2367 MET2368 ILE2369 GLU2370 PRO2371 GLU2372 SER2373 VAL2374 GLY2375 ASP2376 ASP2377 LEU2378 ARG2379 GLN2380 GLN2381 ALA2382 LYS2383 GLN2384 ILE2385 CYS2386 TYR2387 GLY2388 ILE2389 ILE2390 TYR2391 GLY2392 MET2393 GLY2394 ALA2395 LYS2396 SER2397 LEU2398 GLY2399 GLU2400 GLN2401 MET2402 GLY2403 ILE2404 LYS2405 GLU2406 ASN2407 ASP2408 ALA2409 ALA2410 CYS2411 TYR2412 ILE2413 ASP2414 SER2415 PHE2416 LYS2417 SER2418 ARG2419 TYR2420 THR2421 GLY2422 ILE2423 ASN2424 GLN2425 PHE2426 MET2427 THR2428 GLU2429 THR2430 VAL2431 LYS2432 ASN2433 CYS2434 LYS2435 ARG2436 ASP2437 GLY2438 PHE2439 VAL2440 GLN2441 THR2442 ILE2443 LEU2444 GLY2445 ARG2446 ARG2447 ARG2448 TYR2449 LEU2450 PRO2451 GLY2452 ILE2453 LYS2454 ASP2455 ASN2456 ASN2457 PRO2458 TYR2459 ARG2460 LYS2461 ALA2462 HIS2463 ALA2464 GLU2465 ARG2466 GLN2467 ALA2468 ILE2469 ASN2470 THR2471 ILE2472 VAL2473 GLN2474 GLY2475 SER2476 ALA2477 ALA2478 ASP2479 ILE2480 VAL2481 LYS2482 ILE2483 ALA2484 THR2485 VAL2486 ASN2487 ILE2488 GLN2489 LYS2490 GLN2491 LEU2492 GLU2493 THR2494 PHE2495 HIS2496 SER2497 THR2498 PHE2499 LYS2500 SER2501 HIS2502 GLY2503 HIS2504 ARG2505 GLU2506 GLY2507 MET2508 LEU2509 GLN2510 SER2511 ASP2512 CYS2527 PRO2528 ILE2529 ARG2530 GLY2531 GLY2532 PHE2533 PHE2534 ILE2535 LEU2536 GLN2537 LEU2538 HIS2539 ASP2540 GLU2541 LEU2542 LEU2543 TYR2544 GLU2545 VAL2546 ALA2547 GLU2548 GLU2549 ASP2550 VAL2551 VAL2552 GLN2553 VAL2554 ALA2555 GLN2556 ILE2557 VAL2558 LYS2559 ASN2560 GLU2561 MET2562 GLU2563 SER2564 ALA2565 VAL2566 LYS2567 LEU2568 SER2569 VAL2570 LYS2571 LEU2572 LYS2573 VAL2574 LYS2575 VAL2576 LYS2577 ILE2578 GLY2579 ALA2580 SER2581 TRP2582 GLY2583 GLU2584 LEU2585 LYS2586 ASP2587 PHE2588 ASP2589 VAL2590
Other macromolecules
Unit 3 DC1 DG2 DT3 DC4 DC5 DA6 DA7 DT8 DG9 DA10 DC11 DA12 DG13
Unit 4 DC5 DT6 DG7 DT8 DC9 DA10 DT11 DT12 DG13
Unit 5 DC1 DG2 DT3 DC4 DC5 DA6 DA7 DT8 DG9 DA10 DC11 DA12 DG13
Unit 6 DC5 DT6 DG7 DT8 DC9 DA10 DT11 DT12 DG13
Ligands
Unit 7 GOL2601 GOL2602 MG2603 DG32604
Unit 8 GOL2601 GOL2602 MG2603 DG32604
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany