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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF TRNA-PROCESSING ENZYME COMPLEX 7
Keywords RNA NUCLEOTIDYLTRANSFERASE, CCA-ADDING ENZYME, A-ADDING ENZY TRANSFERASE-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4X0B     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POLY A POLYMERASE  A 367 3046 0
2  RNA    B 77 1643 0
total       444 4689 0

Proteins
Unit 1 MET1 VAL2 GLY3 GLN4 ILE5 ALA6 LYS7 GLU8 MET9 GLY10 LEU11 ARG12 ALA13 TYR14 ILE15 VAL16 GLY17 GLY18 VAL19 VAL20 ARG21 ASP22 ILE23 LEU24 LEU25 GLY26 LYS27 GLU28 VAL29 TRP30 ASP31 VAL32 ASP33 PHE34 VAL35 VAL36 GLU37 GLY38 ASN39 ALA40 ILE41 GLU42 LEU43 ALA44 LYS45 GLU46 LEU47 ALA48 ARG49 ARG50 HIS51 GLY52 VAL53 ASN54 VAL55 HIS56 PRO57 PHE58 PRO59 GLU60 PHE61 GLY62 THR63 ALA64 HIS65 LEU66 LYS67 ILE68 GLY69 LYS70 LEU71 LYS72 LEU73 GLU74 PHE75 ALA76 THR77 ALA78 ARG79 ARG80 GLU81 THR82 GLU93 PRO94 ALA95 SER96 LEU97 LYS98 GLU99 ASP100 LEU101 ILE102 ARG103 ARG104 ASP105 PHE106 THR107 ILE108 ASN109 ALA110 MET111 ALA112 ILE113 SER114 VAL115 ASN116 LEU117 GLU118 ASP119 TYR120 GLY121 THR122 LEU123 ILE124 ASP125 TYR126 PHE127 GLY128 GLY129 LEU130 ARG131 ASP132 LEU133 LYS134 ASP135 LYS136 VAL137 ILE138 ARG139 VAL140 LEU141 HIS142 PRO143 VAL144 SER145 PHE146 ILE147 GLU148 ASP149 PRO150 VAL151 ARG152 ILE153 LEU154 ARG155 ALA156 LEU157 ARG158 PHE159 ALA160 GLY161 ARG162 LEU163 ASN164 PHE165 LYS166 LEU167 SER168 ARG169 SER170 THR171 GLU172 LYS173 LEU174 LEU175 LYS176 GLN177 ALA178 VAL179 ASN180 LEU181 GLY182 LEU183 LEU184 LYS185 GLU186 ALA187 PRO188 ARG189 GLY190 ARG191 LEU192 ILE193 ASN194 GLU195 ILE196 LYS197 LEU198 ALA199 LEU200 ARG201 GLU202 ASP203 ARG204 PHE205 LEU206 GLU207 ILE208 LEU209 GLU210 LEU211 TYR212 ARG213 LYS214 TYR215 ARG216 VAL217 LEU218 GLU219 GLU220 ILE221 ILE222 GLU223 GLY224 PHE225 GLN226 TRP227 ASN228 GLU229 LYS230 VAL231 LEU232 GLN233 LYS234 LEU235 TYR236 ALA237 LEU238 ARG239 LYS240 VAL241 VAL242 ASP243 TRP244 HIS245 ALA246 LEU247 GLU248 PHE249 SER250 GLU251 GLU252 ARG253 ILE254 ASP255 TYR256 GLY257 TRP258 LEU259 TYR260 LEU261 LEU262 ILE263 LEU264 ILE265 SER266 ASN267 LEU268 ASP269 TYR270 GLU271 ARG272 GLY273 LYS274 HIS275 PHE276 LEU277 GLU278 GLU279 MET280 SER281 ALA282 PRO283 SER284 TRP285 VAL286 ARG287 GLU288 THR289 TYR290 LYS291 PHE292 MET293 LYS294 PHE295 LYS296 LEU297 GLY298 SER299 LEU300 LYS301 GLU302 GLU303 LEU304 LYS305 LYS306 ALA307 LYS308 GLU309 ASN310 TYR311 GLU312 VAL313 TYR314 ARG315 LEU316 LEU317 LYS318 PRO319 LEU320 HIS321 THR322 SER323 VAL324 LEU325 LEU326 LEU327 LEU328 MET329 LEU330 GLU331 GLU332 GLU333 LEU334 LYS335 GLU336 LYS337 ILE338 LYS339 LEU340 TYR341 LEU342 GLU343 LYS344 LEU345 ARG346 LYS347 VAL348 LYS349 LEU350 PRO351 LYS352 GLU353 LYS354 ILE355 GLU356 GLU357 LEU358 LYS359 LYS360 GLY365 LYS366 GLU367 LEU368 GLY369 GLU370 ARG371 ILE372 GLU373 GLU374 LEU375 LYS376 ARG377 GLU378 ILE379 MET380 ASN381

Nucleic acids
Unit 2 G1 G2 G3 C4 C5 A6 G7 G8 U9 A10 G11 C12 U13 C14 A15 G16 U17 U18 G19 G20 U21 A22 G23 A24 G25 C26 A27 C28 U29 G30 G31 A32 C33 U34 G35 A36 A37 A38 A39 U40 C41 C42 A43 G44 G45 U46 G47 U48 C49 G50 G51 C52 G53 G54 U55 U56 C57 G58 A59 U60 U61 C62 C63 G64 C65 C66 C67 C68 U69 G70 G71 C72 C73 C74 A75 C76 C77

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany