Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF FULL LENGTH YVOA IN COMPLEX WITH PALIND OPERATOR DNA
Keywords TRANSCRIPTION, REPRESSOR, BACTERIAL TRANSCRIPTION REGULATION TRANSCRIPTION FACTOR, GNTR/HUTC FAMILY, WINGED HELIX-TURN-H MOTIF, N-ACETYLGLUCOSAMINE UTILIZATION, DNA-BINDING, OPERAT BINDING
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4WWC     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HTH-TYPE TRANSCRIPTIONAL REPRESSOR YVOA  A 213 1691 0
2  Protein   HTH-TYPE TRANSCRIPTIONAL REPRESSOR YVOA  B 235 1831 16
3  Other macromolecule    E 19 390 0
4  Other macromolecule    F 19 391 0
5  Ligand   HTH-TYPE TRANSCRIPTIONAL REPRESSOR YVOA  A 1 0 4
6  Protein   HTH-TYPE TRANSCRIPTIONAL REPRESSOR YVOA  B 235 1831 16
7  Ligand    E 2 0 8
8 Water     2 0 2
total       726 6134 46
Proteins
Unit 1 HIS0 MET1 ASN2 ILE3 ASN4 LYS5 GLN6 SER7 PRO8 ILE9 PRO10 ILE11 TYR12 TYR13 GLN14 ILE15 MET16 GLU17 GLN18 LEU19 LYS20 THR21 GLN22 ILE23 LYS24 ASN25 GLY26 GLU27 LEU28 GLN29 PRO30 ASP31 MET32 PRO33 LEU34 PRO35 SER36 GLU37 ARG38 GLU39 TYR40 ALA41 GLU42 GLN43 PHE44 GLY45 ILE46 SER47 ARG48 MET49 THR50 VAL51 ARG52 GLN53 ALA54 LEU55 SER56 ASN57 LEU58 VAL59 ASN60 GLU61 GLY62 LEU63 LEU64 TYR65 ARG66 LEU67 LYS68 GLY69 ARG70 GLY71 THR72 PHE73 VAL74 SER75 LYS76 PRO77 LYS78 MET79 GLN84 GLY85 LEU86 THR87 SER88 PHE89 THR90 GLU91 ASP92 MET93 LYS94 SER95 ARG96 GLY97 MET98 THR99 PRO100 GLY101 SER102 ARG103 LEU104 ILE105 ASP106 TYR107 GLN108 LEU109 ILE110 ASP111 SER112 THR113 GLU114 GLU115 LEU116 ALA117 ALA118 ILE119 LEU120 GLY121 CYS122 GLY123 HIS124 SER126 SER127 ILE128 HIS129 LYS130 ILE131 THR132 ARG133 VAL134 ARG135 LEU136 ALA137 ASN138 ASP139 ILE140 PRO141 MET142 ALA143 ILE144 GLU145 SER146 SER147 HIS148 ILE149 PRO150 PHE151 GLU152 ILE178 SER179 ARG180 ALA181 LYS182 GLN183 GLU184 LEU185 GLU186 PRO187 SER188 ALA189 ALA190 THR191 THR192 GLU193 GLU194 ALA195 ASN196 ILE197 LEU198 GLY199 ILE200 GLN201 LYS202 GLY203 ALA204 PRO205 VAL206 LEU207 LEU208 ILE209 LYS210 ARG211 THR212 THR213 TYR214 LEU215 GLN216 ASN217 GLY218 THR219 ALA220 PHE221 GLU222 HIS223 ALA224 LYS225 SER226 VAL227 TYR228 ARG229 GLY230 ASP231 ARG232 TYR233 THR234 PHE235 VAL236 HIS237 TYR238 MET239 ASP240 ARG241 LEU242
Unit 2 HIS0 MET1 ASN2 ILE3 ASN4 LYS5 GLN6 SER7 PRO8 ILE9 PRO10 ILE11 TYR12 TYR13 GLN14 ILE15 MET16 GLU17 GLN18 LEU19 LYS20 THR21 GLN22 ILE23 LYS24 ASN25 GLY26 GLU27 LEU28 GLN29 PRO30 ASP31 MET32 PRO33 LEU34 PRO35 SER36 GLU37 ARG38 GLU39 TYR40 ALA41 GLU42 GLN43 PHE44 GLY45 ILE46 SER47 ARG48 MET49 THR50 VAL51 ARG52 GLN53 ALA54 LEU55 SER56 ASN57 LEU58 VAL59 ASN60 GLU61 GLY62 LEU63 LEU64 TYR65 ARG66 LEU67 LYS68 GLY69 ARG70 GLY71 THR72 PHE73 VAL74 SER75 LYS76 PRO77 LYS78 MET79 GLU80 GLN81 GLY85 LEU86 THR87 SER88 PHE89 THR90 GLU91 ASP92 MET93 LYS94 SER95 ARG96 GLY97 MET98 THR99 PRO100 GLY101 SER102 ARG103 LEU104 ILE105 ASP106 TYR107 GLN108 LEU109 ILE110 ASP111 SER112 GLU114 GLU115 LEU116 ALA117 ALA118 ILE119 LEU120 GLY121 CYS122 GLY123 PRO125 SER126 SER127 ILE128 HIS129 LYS130 ILE131 THR132 ARG133 VAL134 ARG135 LEU136 ALA137 ASN138 ASP139 ILE140 PRO141 MET142 ALA143 ILE144 GLU145 SER146 SER147 HIS148 ILE149 PRO150 PHE151 GLU152 LEU153 ALA154 GLY155 GLU156 LEU157 ASN158 GLU159 SER160 ILE166 TYR167 ASP168 HIS169 ILE170 GLU171 ARG172 TYR173 ASN174 SER175 ILE176 PRO177 ILE178 SER179 ARG180 ALA181 LYS182 GLN183 GLU184 LEU185 GLU186 PRO187 SER188 ALA189 ALA190 THR191 THR192 GLU193 GLU194 ALA195 ASN196 ILE197 LEU198 GLY199 ILE200 GLN201 LYS202 GLY203 ALA204 PRO205 VAL206 LEU207 LEU208 ILE209 LYS210 ARG211 THR212 THR213 TYR214 LEU215 GLN216 ASN217 GLY218 THR219 ALA220 PHE221 GLU222 HIS223 ALA224 LYS225 SER226 VAL227 TYR228 ARG229 GLY230 ASP231 ARG232 TYR233 THR234 PHE235 VAL236 HIS237 TYR238 MET239 ASP240 EDO301 EDO302 EDO303 EDO304
Unit 6 HIS0 MET1 ASN2 ILE3 ASN4 LYS5 GLN6 SER7 PRO8 ILE9 PRO10 ILE11 TYR12 TYR13 GLN14 ILE15 MET16 GLU17 GLN18 LEU19 LYS20 THR21 GLN22 ILE23 LYS24 ASN25 GLY26 GLU27 LEU28 GLN29 PRO30 ASP31 MET32 PRO33 LEU34 PRO35 SER36 GLU37 ARG38 GLU39 TYR40 ALA41 GLU42 GLN43 PHE44 GLY45 ILE46 SER47 ARG48 MET49 THR50 VAL51 ARG52 GLN53 ALA54 LEU55 SER56 ASN57 LEU58 VAL59 ASN60 GLU61 GLY62 LEU63 LEU64 TYR65 ARG66 LEU67 LYS68 GLY69 ARG70 GLY71 THR72 PHE73 VAL74 SER75 LYS76 PRO77 LYS78 MET79 GLU80 GLN81 GLY85 LEU86 THR87 SER88 PHE89 THR90 GLU91 ASP92 MET93 LYS94 SER95 ARG96 GLY97 MET98 THR99 PRO100 GLY101 SER102 ARG103 LEU104 ILE105 ASP106 TYR107 GLN108 LEU109 ILE110 ASP111 SER112 GLU114 GLU115 LEU116 ALA117 ALA118 ILE119 LEU120 GLY121 CYS122 GLY123 PRO125 SER126 SER127 ILE128 HIS129 LYS130 ILE131 THR132 ARG133 VAL134 ARG135 LEU136 ALA137 ASN138 ASP139 ILE140 PRO141 MET142 ALA143 ILE144 GLU145 SER146 SER147 HIS148 ILE149 PRO150 PHE151 GLU152 LEU153 ALA154 GLY155 GLU156 LEU157 ASN158 GLU159 SER160 ILE166 TYR167 ASP168 HIS169 ILE170 GLU171 ARG172 TYR173 ASN174 SER175 ILE176 PRO177 ILE178 SER179 ARG180 ALA181 LYS182 GLN183 GLU184 LEU185 GLU186 PRO187 SER188 ALA189 ALA190 THR191 THR192 GLU193 GLU194 ALA195 ASN196 ILE197 LEU198 GLY199 ILE200 GLN201 LYS202 GLY203 ALA204 PRO205 VAL206 LEU207 LEU208 ILE209 LYS210 ARG211 THR212 THR213 TYR214 LEU215 GLN216 ASN217 GLY218 THR219 ALA220 PHE221 GLU222 HIS223 ALA224 LYS225 SER226 VAL227 TYR228 ARG229 GLY230 ASP231 ARG232 TYR233 THR234 PHE235 VAL236 HIS237 TYR238 MET239 ASP240 EDO301 EDO302 EDO303 EDO304
Other macromolecules
Unit 3 DC1 DA2 DG3 DT4 DG5 DG6 DT7 DC8 DT9 DA10 DG11 DA12 DC13 DC14 DA15 DC16 DT17 DG18 DG19
Unit 4 DC1 DA2 DG3 DT4 DG5 DG6 DT7 DC8 DT9 DA10 DG11 DA12 DC13 DC14 DA15 DC16 DT17 DG18 DG19
Ligands
Unit 5 EDO301
Unit 7 EDO101 EDO102
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany