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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF LAMBDA EXONUCLEASE IN COMPLEX WITH DNA
Keywords EXONUCLEASE, TYPE II RESTRICTION ENDONUCLEASE, HYDROLASE-DNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4WUZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   EXONUCLEASE  A 226 1801 0
2  Protein   EXONUCLEASE  B 226 1787 0
3  Protein   EXONUCLEASE  C 225 1778 0
4  Other macromolecule    D 12 246 0
5  Other macromolecule    E 14 287 0
6  Ligand   EXONUCLEASE  A 2 0 6
7  Ligand   EXONUCLEASE  B 1 0 1
8  Ligand   EXONUCLEASE  C 2 0 6
9 Water     236 0 236
total       944 5899 249

Proteins
Unit 1 MET1 THR2 PRO3 ASP4 ILE5 ILE6 LEU7 GLN8 ARG9 THR10 GLY11 ILE12 ASP13 VAL14 ARG15 ALA16 VAL17 GLU18 GLN19 GLY20 ASP21 ASP22 ALA23 TRP24 HIS25 LYS26 LEU27 ARG28 LEU29 GLY30 VAL31 ILE32 THR33 ALA34 SER35 GLU36 VAL37 HIS38 ASN39 VAL40 ILE41 ALA42 LYS43 PRO44 ARG45 SER46 GLY47 LYS48 LYS49 TRP50 PRO51 ASP52 MET53 LYS54 MET55 SER56 TYR57 PHE58 HIS59 THR60 LEU61 LEU62 ALA63 GLU64 VAL65 CYS66 THR67 GLY68 VAL69 ALA70 PRO71 GLU72 VAL73 ASN74 ALA75 LYS76 ALA77 LEU78 ALA79 TRP80 GLY81 LYS82 GLN83 TYR84 GLU85 ASN86 ASP87 ALA88 ARG89 THR90 LEU91 PHE92 GLU93 PHE94 THR95 SER96 GLY97 VAL98 ASN99 VAL100 THR101 GLU102 SER103 PRO104 ILE105 ILE106 TYR107 ARG108 ASP109 GLU110 SER111 MET112 ARG113 THR114 ALA115 CYS116 SER117 PRO118 ASP119 GLY120 LEU121 CYS122 SER123 ASP124 GLY125 ASN126 GLY127 LEU128 GLU129 LEU130 LYS131 CYS132 PRO133 PHE134 THR135 SER136 ARG137 ASP138 PHE139 MET140 LYS141 PHE142 ARG143 LEU144 GLY145 GLY146 PHE147 GLU148 ALA149 ILE150 LYS151 SER152 ALA153 TYR154 MET155 ALA156 GLN157 VAL158 GLN159 TYR160 SER161 MET162 TRP163 VAL164 THR165 ARG166 LYS167 ASN168 ALA169 TRP170 TYR171 PHE172 ALA173 ASN174 TYR175 ASP176 PRO177 ARG178 MET179 LYS180 ARG181 GLU182 GLY183 LEU184 HIS185 TYR186 VAL187 VAL188 ILE189 GLU190 ARG191 ASP192 GLU193 LYS194 TYR195 MET196 ALA197 SER198 PHE199 ASP200 GLU201 ILE202 VAL203 PRO204 GLU205 PHE206 ILE207 GLU208 LYS209 MET210 ASP211 GLU212 ALA213 LEU214 ALA215 GLU216 ILE217 GLY218 PHE219 VAL220 PHE221 GLY222 GLU223 GLN224 TRP225 ARG226
Unit 2 MET1 THR2 PRO3 ASP4 ILE5 ILE6 LEU7 GLN8 ARG9 THR10 GLY11 ILE12 ASP13 VAL14 ARG15 ALA16 VAL17 GLU18 GLN19 GLY20 ASP21 ASP22 ALA23 TRP24 HIS25 LYS26 LEU27 ARG28 LEU29 GLY30 VAL31 ILE32 THR33 ALA34 SER35 GLU36 VAL37 HIS38 ASN39 VAL40 ILE41 ALA42 LYS43 PRO44 ARG45 SER46 GLY47 LYS48 LYS49 TRP50 PRO51 ASP52 MET53 LYS54 MET55 SER56 TYR57 PHE58 HIS59 THR60 LEU61 LEU62 ALA63 GLU64 VAL65 CYS66 THR67 GLY68 VAL69 ALA70 PRO71 GLU72 VAL73 ASN74 ALA75 LYS76 ALA77 LEU78 ALA79 TRP80 GLY81 LYS82 GLN83 TYR84 GLU85 ASN86 ASP87 ALA88 ARG89 THR90 LEU91 PHE92 GLU93 PHE94 THR95 SER96 GLY97 VAL98 ASN99 VAL100 THR101 GLU102 SER103 PRO104 ILE105 ILE106 TYR107 ARG108 ASP109 GLU110 SER111 MET112 ARG113 THR114 ALA115 CYS116 SER117 PRO118 ASP119 GLY120 LEU121 CYS122 SER123 ASP124 GLY125 ASN126 GLY127 LEU128 GLU129 LEU130 LYS131 CYS132 PRO133 PHE134 THR135 SER136 ARG137 ASP138 PHE139 MET140 LYS141 PHE142 ARG143 LEU144 GLY145 GLY146 PHE147 GLU148 ALA149 ILE150 LYS151 SER152 ALA153 TYR154 MET155 ALA156 GLN157 VAL158 GLN159 TYR160 SER161 MET162 TRP163 VAL164 THR165 ARG166 LYS167 ASN168 ALA169 TRP170 TYR171 PHE172 ALA173 ASN174 TYR175 ASP176 PRO177 ARG178 MET179 LYS180 ARG181 GLU182 GLY183 LEU184 HIS185 TYR186 VAL187 VAL188 ILE189 GLU190 ARG191 ASP192 GLU193 LYS194 TYR195 MET196 ALA197 SER198 PHE199 ASP200 GLU201 ILE202 VAL203 PRO204 GLU205 PHE206 ILE207 GLU208 LYS209 MET210 ASP211 GLU212 ALA213 LEU214 ALA215 GLU216 ILE217 GLY218 PHE219 VAL220 PHE221 GLY222 GLU223 GLN224 TRP225 ARG226
Unit 3 THR2 PRO3 ASP4 ILE5 ILE6 LEU7 GLN8 ARG9 THR10 GLY11 ILE12 ASP13 VAL14 ARG15 ALA16 VAL17 GLU18 GLN19 GLY20 ASP21 ASP22 ALA23 TRP24 HIS25 LYS26 LEU27 ARG28 LEU29 GLY30 VAL31 ILE32 THR33 ALA34 SER35 GLU36 VAL37 HIS38 ASN39 VAL40 ILE41 ALA42 LYS43 PRO44 ARG45 SER46 GLY47 LYS48 LYS49 TRP50 PRO51 ASP52 MET53 LYS54 MET55 SER56 TYR57 PHE58 HIS59 THR60 LEU61 LEU62 ALA63 GLU64 VAL65 CYS66 THR67 GLY68 VAL69 ALA70 PRO71 GLU72 VAL73 ASN74 ALA75 LYS76 ALA77 LEU78 ALA79 TRP80 GLY81 LYS82 GLN83 TYR84 GLU85 ASN86 ASP87 ALA88 ARG89 THR90 LEU91 PHE92 GLU93 PHE94 THR95 SER96 GLY97 VAL98 ASN99 VAL100 THR101 GLU102 SER103 PRO104 ILE105 ILE106 TYR107 ARG108 ASP109 GLU110 SER111 MET112 ARG113 THR114 ALA115 CYS116 SER117 PRO118 ASP119 GLY120 LEU121 CYS122 SER123 ASP124 GLY125 ASN126 GLY127 LEU128 GLU129 LEU130 LYS131 CYS132 PRO133 PHE134 THR135 SER136 ARG137 ASP138 PHE139 MET140 LYS141 PHE142 ARG143 LEU144 GLY145 GLY146 PHE147 GLU148 ALA149 ILE150 LYS151 SER152 ALA153 TYR154 MET155 ALA156 GLN157 VAL158 GLN159 TYR160 SER161 MET162 TRP163 VAL164 THR165 ARG166 LYS167 ASN168 ALA169 TRP170 TYR171 PHE172 ALA173 ASN174 TYR175 ASP176 PRO177 ARG178 MET179 LYS180 ARG181 GLU182 GLY183 LEU184 HIS185 TYR186 VAL187 VAL188 ILE189 GLU190 ARG191 ASP192 GLU193 LYS194 TYR195 MET196 ALA197 SER198 PHE199 ASP200 GLU201 ILE202 VAL203 PRO204 GLU205 PHE206 ILE207 GLU208 LYS209 MET210 ASP211 GLU212 ALA213 LEU214 ALA215 GLU216 ILE217 GLY218 PHE219 VAL220 PHE221 GLY222 GLU223 GLN224 TRP225 ARG226

Other macromolecules
Unit 4 DT1 DC2 DG3 DG4 DT5 DA6 DC7 DA8 DG9 DT10 DA11 DG12
Unit 5 DA1 DG2 DC3 DT4 DA5 DC6 DT7 DG8 DT9 DA10 DC11 DC12 DG13 DA14

Ligands
Unit 6 CA301 PO4302
Unit 7 CA301
Unit 8 PO4301 CA302

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany