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Sequence, Chains, Asymmetric and Biological Units

Title METAL ION AND LIGAND BINDING OF INTEGRIN
Keywords CELL ADHESION-FIBRONECTIN RECEPTOR, CELL ADHESION-IMMUNE SYS COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4WK2     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   INTEGRIN ALPHA-5  A 448 6550 0
2  Protein   INTEGRIN BETA-1  B 427 6593 0
3  Protein   GLY-ARG-GLY-ASP-SER-PRO  C 6 75 0
4  Ligand    D 7 0 157
5  Ligand    E 2 0 55
6  Ligand    F 4 0 96
7  Ligand    G 2 0 54
8  Ligand    H 2 0 55
9  Ligand    I 2 0 55
10  Ligand   INTEGRIN ALPHA-5  A 5 0 32
11  Ligand   INTEGRIN BETA-1  B 6 0 87
12 Water     164 0 164
total       1075 13218 755

Proteins
Unit 1 PHE1 ASN2 LEU3 ASP4 ALA5 GLU6 ALA7 PRO8 ALA9 VAL10 LEU11 SER12 GLY13 PRO14 PRO15 GLY16 SER17 PHE18 PHE19 GLY20 PHE21 SER22 VAL23 GLU24 PHE25 TYR26 ARG27 PRO28 GLY29 THR30 ASP31 GLY32 VAL33 SER34 VAL35 LEU36 VAL37 GLY38 ALA39 PRO40 LYS41 ALA42 ASN43 THR44 SER45 GLN46 PRO47 GLY48 VAL49 LEU50 GLN51 GLY52 GLY53 ALA54 VAL55 TYR56 LEU57 CYS58 PRO59 TRP60 GLY61 ALA62 GLN66 CYS67 THR68 PRO69 ILE70 GLU71 PHE72 ASP73 SER74 LYS75 GLY76 SER77 ARG78 LEU79 LEU80 GLU81 SER82 SER83 LEU84 SER86 SER87 GLU88 GLY89 GLU90 GLU91 PRO92 VAL93 GLU94 TYR95 LYS96 SER97 LEU98 GLN99 TRP100 PHE101 GLY102 ALA103 THR104 VAL105 ARG106 ALA107 HIS108 GLY109 SER110 SER111 ILE112 LEU113 ALA114 CYS115 ALA116 PRO117 LEU118 TYR119 SER120 TRP121 ARG122 THR123 GLU124 LYS125 GLU126 PRO127 LEU128 SER129 ASP130 PRO131 VAL132 GLY133 THR134 CYS135 TYR136 LEU137 SER138 THR139 ASP140 ASN141 PHE142 THR143 ARG144 ILE145 LEU146 GLU147 TYR148 ALA149 PRO150 CYS151 ARG152 SER153 ASP154 PHE155 SER156 TRP157 ALA158 ALA159 GLY160 GLN161 GLY162 TYR163 CYS164 GLN165 GLY166 GLY167 PHE168 SER169 ALA170 GLU171 PHE172 THR173 LYS174 THR175 GLY176 ARG177 VAL178 VAL179 LEU180 GLY181 GLY182 PRO183 GLY184 SER185 TYR186 PHE187 TRP188 GLN189 GLY190 GLN191 ILE192 LEU193 SER194 ALA195 THR196 GLN197 GLU198 GLN199 ILE200 ALA201 GLU202 SER203 TYR204 TYR205 PRO206 GLU207 TYR208 LEU209 ILE210 ASN211 LEU212 VAL213 GLN214 GLY215 GLN216 LEU217 GLN218 THR219 ARG220 GLN221 ALA222 SER223 SER224 ILE225 TYR226 ASP227 ASP228 SER229 TYR230 LEU231 GLY232 TYR233 SER234 VAL235 ALA236 VAL237 GLY238 GLU239 PHE240 SER241 GLY242 ASP243 ASP244 THR245 GLU246 ASP247 PHE248 VAL249 ALA250 GLY251 VAL252 PRO253 LYS254 GLY255 ASN256 LEU257 THR258 TYR259 GLY260 TYR261 VAL262 THR263 ILE264 LEU265 ASN266 GLY267 SER268 ASP269 ILE270 ARG271 SER272 LEU273 TYR274 ASN275 PHE276 SER277 GLY278 GLU279 GLN280 MET281 ALA282 SER283 TYR284 PHE285 GLY286 TYR287 ALA288 VAL289 ALA290 ALA291 THR292 ASP293 VAL294 ASN295 GLY296 ASP297 GLY298 LEU299 ASP300 ASP301 LEU302 LEU303 VAL304 GLY305 ALA306 PRO307 LEU308 LEU309 MET310 ASP311 ARG312 THR313 PRO314 ASP315 GLY316 ARG317 PRO318 GLN319 GLU320 VAL321 GLY322 ARG323 VAL324 TYR325 VAL326 TYR327 LEU328 GLN329 HIS330 PRO331 ALA332 GLY333 ILE334 GLU335 PRO336 THR337 PRO338 THR339 LEU340 THR341 LEU342 THR343 GLY344 HIS345 ASP346 GLU347 PHE348 GLY349 ARG350 PHE351 GLY352 SER353 SER354 LEU355 THR356 PRO357 LEU358 GLY359 ASP360 LEU361 ASP362 GLN363 ASP364 GLY365 TYR366 ASN367 ASP368 VAL369 ALA370 ILE371 GLY372 ALA373 PRO374 PHE375 GLY376 GLY377 GLU378 THR379 GLN380 GLN381 GLY382 VAL383 VAL384 PHE385 VAL386 PHE387 PRO388 GLY389 GLY390 PRO391 GLY392 GLY393 LEU394 GLY395 SER396 LYS397 PRO398 SER399 GLN400 VAL401 LEU402 GLN403 PRO404 LEU405 TRP406 ALA407 ALA408 SER409 HIS410 THR411 PRO412 ASP413 PHE414 PHE415 GLY416 SER417 ALA418 LEU419 ARG420 GLY421 GLY422 ARG423 ASP424 LEU425 ASP426 GLY427 ASN428 GLY429 TYR430 PRO431 ASP432 LEU433 ILE434 VAL435 GLY436 SER437 PHE438 GLY439 VAL440 ASP441 LYS442 ALA443 VAL444 VAL445 TYR446 ARG447 GLY448 ARG449 PRO450 VAL451 VAL452
Unit 2 ASN5 ARG6 CYS7 LEU8 LYS9 ALA10 ASN11 ALA12 LYS13 SER14 CYS15 GLY16 GLU17 CYS18 ILE19 GLN20 ALA21 GLY22 PRO23 ASN24 CYS25 GLY26 TRP27 CYS28 THR29 ASN30 SER31 THR32 PHE33 LEU34 SER41 ALA42 ARG43 CYS44 ASP45 ASP46 LEU47 GLU48 ALA49 LEU50 LYS51 LYS52 LYS53 GLY54 CYS55 PRO56 PRO57 ASP58 ASP59 ILE60 GLU61 ASN62 PRO63 ARG64 GLY65 SER66 LYS67 ASP68 ILE69 LYS70 LYS71 ASN72 LYS73 ASN74 VAL75 THR76 ASN77 LYS85 LEU86 LYS87 PRO88 GLU89 ASP90 ILE91 THR92 GLN93 ILE94 GLN95 PRO96 GLN97 GLN98 LEU99 VAL100 LEU101 ARG102 LEU103 ARG104 SER105 GLY106 GLU107 PRO108 GLN109 THR110 PHE111 THR112 LEU113 LYS114 PHE115 LYS116 ARG117 ALA118 GLU119 ASP120 TYR121 PRO122 ILE123 ASP124 LEU125 TYR126 TYR127 LEU128 MET129 ASP130 LEU131 SER132 TYR133 SER134 MET135 LYS136 ASP137 ASP138 LEU139 GLU140 ASN141 VAL142 LYS143 SER144 LEU145 GLY146 THR147 ASP148 LEU149 MET150 ASN151 GLU152 MET153 ARG154 ARG155 ILE156 THR157 SER158 ASP159 PHE160 ARG161 ILE162 GLY163 PHE164 GLY165 SER166 PHE167 VAL168 GLU169 LYS170 THR171 VAL172 MET173 PRO174 TYR175 ILE176 SER177 THR178 THR179 PRO180 ALA181 LYS182 LEU183 ARG184 ASN185 PRO186 CYS187 THR188 SER189 GLU190 GLN191 ASN192 CYS193 THR194 THR195 PRO196 PHE197 SER198 TYR199 LYS200 ASN201 VAL202 LEU203 SER204 LEU205 THR206 ASN207 LYS208 GLY209 GLU210 VAL211 PHE212 ASN213 GLU214 LEU215 VAL216 GLY217 LYS218 GLN219 ARG220 ILE221 SER222 GLY223 ASN224 LEU225 ASP226 SER227 PRO228 GLU229 GLY230 GLY231 PHE232 ASP233 ALA234 ILE235 MET236 GLN237 VAL238 ALA239 VAL240 CYS241 GLY242 SER243 LEU244 ILE245 GLY246 TRP247 ARG248 ASN249 VAL250 THR251 ARG252 LEU253 LEU254 VAL255 PHE256 SER257 THR258 ASP259 ALA260 GLY261 PHE262 HIS263 PHE264 ALA265 GLY266 ASP267 GLY268 LYS269 LEU270 GLY271 GLY272 ILE273 VAL274 LEU275 PRO276 ASN277 ASP278 GLY279 GLN280 CYS281 HIS282 LEU283 GLU284 ASN285 ASN286 MET287 TYR288 THR289 MET290 SER291 HIS292 TYR293 TYR294 ASP295 TYR296 PRO297 SER298 ILE299 ALA300 HIS301 LEU302 VAL303 GLN304 LYS305 LEU306 SER307 GLU308 ASN309 ASN310 ILE311 GLN312 THR313 ILE314 PHE315 ALA316 VAL317 THR318 GLU319 GLU320 PHE321 GLN322 PRO323 VAL324 TYR325 LYS326 GLU327 LEU328 LYS329 ASN330 LEU331 ILE332 PRO333 LYS334 SER335 ALA336 VAL337 GLY338 THR339 LEU340 SER341 ALA342 ASN343 SER344 SER345 ASN346 VAL347 ILE348 GLN349 LEU350 ILE351 ILE352 ASP353 ALA354 TYR355 ASN356 SER357 LEU358 SER359 SER360 GLU361 VAL362 ILE363 LEU364 GLU365 ASN366 GLY367 LYS368 LEU369 SER370 GLU371 GLY372 VAL373 THR374 ILE375 SER376 TYR377 LYS378 SER379 TYR380 CYS381 LYS382 ASN383 GLY384 VAL385 ASN386 GLY387 THR388 GLY389 GLU390 ASN391 GLY392 ARG393 LYS394 CYS395 SER396 ASN397 ILE398 SER399 ILE400 GLY401 ASP402 GLU403 VAL404 GLN405 PHE406 GLU407 ILE408 SER409 ILE410 THR411 SER412 ASN413 LYS414 CYS415 PRO416 LYS417 LYS418 ASP419 SER420 ASP421 SER422 PHE423 LYS424 ILE425 ARG426 PRO427 LEU428 GLY429 PHE430 THR431 GLU432 GLU433 VAL434 GLU435 VAL436 ILE437 LEU438 GLN439 TYR440 ILE441 CYS442 GLU443 CYS444
Unit 3 GLY5000 ARG5001 GLY5002 ASP5003 SER5004 PRO5005

Ligands
Unit 4 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 MAN7
Unit 5 NAG1 NAG2
Unit 6 NAG1 NAG2 BMA3 MAN4
Unit 7 NAG1 NAG2
Unit 8 NAG1 NAG2
Unit 9 NAG1 NAG2
Unit 10 CA501 CA502 CA503 CA504 NAG520
Unit 11 MG501 CA502 CA503 NAG508 NAG509 NAG510

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany