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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF HUMAN DIPEPTIDYL PEPTIDASE 10 (DPPY): A MODULAT NEURONAL KV4 CHANNELS
Keywords INACTIVE DIPEPTIDYL PEPTIDASE 10, DPP4 STRUCTURE HOMOLOGUE, ALPHA/BETA HYDROLASE, BETA-PROPELLER, MEMBRANE PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4WJL     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   INACTIVE DIPEPTIDYL PEPTIDASE 10  A 717 5794 0
2  Protein   INACTIVE DIPEPTIDYL PEPTIDASE 10  B 719 5806 0
3  Ligand    C 4 0 50
4  Ligand    D 2 0 28
5  Ligand    E 2 0 28
6  Ligand    F 3 0 39
7  Ligand    G 2 0 28
8  Ligand   INACTIVE DIPEPTIDYL PEPTIDASE 10  A 2 0 28
9  Ligand   INACTIVE DIPEPTIDYL PEPTIDASE 10  B 2 0 28
total       1453 11600 229
Proteins
Unit 1 GLU66 THR67 ARG68 LEU69 SER70 LEU71 GLU72 ASP73 LEU74 PHE75 ARG76 LYS77 ASP78 PHE79 VAL80 LEU81 HIS82 ASP83 PRO84 GLU85 ALA86 ARG87 TRP88 ILE89 ASN90 ASP91 THR92 ASP93 VAL94 VAL95 TYR96 LYS97 SER98 GLU99 ASN100 GLY101 HIS102 VAL103 ILE104 LYS105 LEU106 ASN107 ILE108 GLU109 THR110 ASN111 ALA112 THR113 THR114 LEU115 LEU116 LEU117 GLU118 ASN119 THR120 THR121 PHE122 VAL123 THR124 PHE125 LYS126 ALA127 SER128 ARG129 HIS130 SER131 VAL132 SER133 PRO134 ASP135 LEU136 LYS137 TYR138 VAL139 LEU140 LEU141 ALA142 TYR143 ASP144 VAL145 LYS146 GLN147 ILE148 PHE149 HIS150 TYR151 SER152 TYR153 THR154 ALA155 SER156 TYR157 VAL158 ILE159 TYR160 ASN161 ILE162 HIS163 THR164 ARG165 GLU166 VAL167 TRP168 GLU169 LEU170 ASN171 PRO172 PRO173 GLU174 VAL175 GLU176 ASP177 SER178 VAL179 LEU180 GLN181 TYR182 ALA183 ALA184 TRP185 GLY186 VAL187 GLN188 GLY189 GLN190 GLN191 LEU192 ILE193 TYR194 ILE195 PHE196 GLU197 ASN198 ASN199 ILE200 TYR201 TYR202 GLN203 PRO204 ASP205 ILE206 LYS207 SER208 SER209 SER210 LEU211 ARG212 LEU213 THR214 SER215 SER216 GLY217 LYS218 GLU219 GLU220 ILE221 ILE222 PHE223 ASN224 GLY225 ILE226 ALA227 ASP228 TRP229 LEU230 TYR231 GLU232 GLU233 GLU234 LEU235 LEU236 HIS237 SER238 HIS239 ILE240 ALA241 HIS242 TRP243 TRP244 SER245 PRO246 ASP247 GLY248 GLU249 ARG250 LEU251 ALA252 PHE253 LEU254 MET255 ILE256 ASN257 ASP258 SER259 LEU260 VAL261 PRO262 THR263 MET264 VAL265 ILE266 PRO267 ARG268 PHE269 THR270 GLY271 ALA272 LEU273 TYR274 PRO275 LYS276 GLY277 LYS278 GLN279 TYR280 PRO281 TYR282 PRO283 LYS284 ALA285 GLY286 GLN287 MET288 ASN289 PRO290 THR291 ILE292 LYS293 LEU294 TYR295 VAL296 VAL297 ASN298 LEU299 TYR300 GLY301 PRO302 THR303 HIS304 THR305 LEU306 GLU307 LEU308 MET309 PRO310 PRO311 ASP312 SER313 PHE314 LYS315 SER316 ARG317 GLU318 TYR319 TYR320 ILE321 THR322 MET323 VAL324 LYS325 TRP326 VAL327 SER328 ASN329 THR330 LYS331 THR332 VAL333 VAL334 ARG335 TRP336 LEU337 ASN338 ARG339 ALA340 GLN341 ASN342 ILE343 SER344 ILE345 LEU346 THR347 VAL348 CYS349 GLU350 THR351 THR352 THR353 GLY354 ALA355 CYS356 SER357 LYS358 LYS359 TYR360 GLU361 MET362 THR363 SER364 ASP365 THR366 TRP367 LEU368 SER369 GLN370 GLN371 ASN372 GLU373 GLU374 PRO375 VAL376 PHE377 SER378 ARG379 ASP380 GLY381 SER382 LYS383 PHE384 PHE385 MET386 THR387 VAL388 PRO389 VAL390 LYS391 GLN392 GLY393 GLY394 ARG395 GLY396 GLU397 PHE398 HIS399 HIS400 ILE401 ALA402 MET403 PHE404 LEU405 ILE406 GLN407 SER408 LYS409 SER410 GLU411 GLN412 ILE413 THR414 VAL415 ARG416 HIS417 LEU418 THR419 SER420 GLY421 ASN422 TRP423 GLU424 VAL425 ILE426 LYS427 ILE428 LEU429 ALA430 TYR431 ASP432 GLU433 THR434 THR435 GLN436 LYS437 ILE438 TYR439 PHE440 LEU441 SER442 THR443 GLU444 SER445 SER446 PRO447 ARG448 GLY449 ARG450 GLN451 LEU452 TYR453 SER454 ALA455 SER456 THR457 GLU458 GLY459 LEU460 LEU461 ASN462 ARG463 GLN464 CYS465 ILE466 SER467 CYS468 ASN469 PHE470 MET471 LYS472 GLU473 GLN474 CYS475 THR476 TYR477 PHE478 ASP479 ALA480 SER481 PHE482 SER483 PRO484 MET485 ASN486 GLN487 HIS488 PHE489 LEU490 LEU491 PHE492 CYS493 GLU494 GLY495 PRO496 ARG497 VAL498 PRO499 VAL500 VAL501 SER502 LEU503 HIS504 SER505 THR506 ASP507 ASN508 PRO509 ALA510 LYS511 TYR512 PHE513 ILE514 LEU515 GLU516 SER517 ASN518 SER519 MET520 LEU521 LYS522 GLU523 ALA524 ILE525 LEU526 LYS527 LYS528 LYS529 ILE530 GLY531 LYS532 PRO533 GLU534 ILE535 LYS536 ILE537 LEU538 HIS539 ILE540 ASP541 ASP542 TYR543 GLU544 LEU545 PRO546 LEU547 GLN548 LEU549 SER550 LEU551 PRO552 LYS553 ASP554 PHE555 MET556 ASP557 ARG558 ASN559 GLN560 TYR561 ALA562 LEU563 LEU564 LEU565 ILE566 MET567 ASP568 GLU569 GLU570 PRO571 GLY572 GLY573 GLN574 LEU575 VAL576 THR577 ASP578 LYS579 PHE580 HIS581 ILE582 ASP583 TRP584 ASP585 SER586 VAL587 LEU588 ILE589 ASP590 MET591 ASP592 ASN593 VAL594 ILE595 VAL596 ALA597 ARG598 PHE599 ASP600 GLY601 ARG602 GLY603 SER604 GLY605 PHE606 GLN607 GLY608 LEU609 LYS610 ILE611 LEU612 GLN613 GLU614 ILE615 HIS616 ARG617 ARG618 LEU619 GLY620 SER621 VAL622 GLU623 VAL624 LYS625 ASP626 GLN627 ILE628 THR629 ALA630 VAL631 LYS632 PHE633 LEU634 LEU635 LYS636 LEU637 PRO638 TYR639 ILE640 ASP641 SER642 LYS643 ARG644 LEU645 SER646 ILE647 PHE648 GLY649 LYS650 GLY651 TYR652 GLY653 GLY654 TYR655 ILE656 ALA657 SER658 MET659 ILE660 LEU661 LYS662 SER663 ASP664 GLU665 LYS666 LEU667 PHE668 LYS669 CYS670 GLY671 SER672 VAL673 VAL674 ALA675 PRO676 ILE677 THR678 ASP679 LEU680 LYS681 LEU682 TYR683 ALA684 SER685 ALA686 PHE687 SER688 GLU689 ARG690 TYR691 LEU692 GLY693 MET694 PRO695 SER696 LYS697 GLU698 GLU699 SER700 THR701 TYR702 GLN703 ALA704 ALA705 SER706 VAL707 LEU708 HIS709 ASN710 VAL711 HIS712 GLY713 LEU714 LYS715 GLU716 GLU717 ASN718 ILE719 LEU720 ILE721 ILE722 HIS723 GLY724 THR725 ALA726 ASP727 THR728 LYS729 VAL730 HIS731 PHE732 GLN733 HIS734 SER735 ALA736 GLU737 LEU738 ILE739 LYS740 HIS741 LEU742 ILE743 LYS744 ALA745 GLY746 VAL747 ASN748 TYR749 THR750 MET751 GLN752 VAL753 TYR754 PRO755 ASP756 GLU757 GLY758 HIS759 ASN760 VAL761 SER762 GLU763 LYS764 SER765 LYS766 TYR767 HIS768 LEU769 TYR770 SER771 THR772 ILE773 LEU774 LYS775 PHE776 PHE777 SER778 ASP779 CYS780 LEU781 LYS782
Unit 2 SER65 GLU66 THR67 ARG68 LEU69 SER70 LEU71 GLU72 ASP73 LEU74 PHE75 ARG76 LYS77 ASP78 PHE79 VAL80 LEU81 HIS82 ASP83 PRO84 GLU85 ALA86 ARG87 TRP88 ILE89 ASN90 ASP91 THR92 ASP93 VAL94 VAL95 TYR96 LYS97 SER98 GLU99 ASN100 GLY101 HIS102 VAL103 ILE104 LYS105 LEU106 ASN107 ILE108 GLU109 THR110 ASN111 ALA112 THR113 THR114 LEU115 LEU116 LEU117 GLU118 ASN119 THR120 THR121 PHE122 VAL123 THR124 PHE125 LYS126 ALA127 SER128 ARG129 HIS130 SER131 VAL132 SER133 PRO134 ASP135 LEU136 LYS137 TYR138 VAL139 LEU140 LEU141 ALA142 TYR143 ASP144 VAL145 LYS146 GLN147 ILE148 PHE149 HIS150 TYR151 SER152 TYR153 THR154 ALA155 SER156 TYR157 VAL158 ILE159 TYR160 ASN161 ILE162 HIS163 THR164 ARG165 GLU166 VAL167 TRP168 GLU169 LEU170 ASN171 PRO172 PRO173 GLU174 VAL175 GLU176 ASP177 SER178 VAL179 LEU180 GLN181 TYR182 ALA183 ALA184 TRP185 GLY186 VAL187 GLN188 GLY189 GLN190 GLN191 LEU192 ILE193 TYR194 ILE195 PHE196 GLU197 ASN198 ASN199 ILE200 TYR201 TYR202 GLN203 PRO204 ASP205 ILE206 LYS207 SER208 SER209 SER210 LEU211 ARG212 LEU213 THR214 SER215 SER216 GLY217 LYS218 GLU219 GLU220 ILE221 ILE222 PHE223 ASN224 GLY225 ILE226 ALA227 ASP228 TRP229 LEU230 TYR231 GLU232 GLU233 GLU234 LEU235 LEU236 HIS237 SER238 HIS239 ILE240 ALA241 HIS242 TRP243 TRP244 SER245 PRO246 ASP247 GLY248 GLU249 ARG250 LEU251 ALA252 PHE253 LEU254 MET255 ILE256 ASN257 ASP258 SER259 LEU260 VAL261 PRO262 THR263 MET264 VAL265 ILE266 PRO267 ARG268 PHE269 THR270 GLY271 ALA272 LEU273 TYR274 PRO275 LYS276 GLY277 LYS278 GLN279 TYR280 PRO281 TYR282 PRO283 LYS284 ALA285 GLY286 GLN287 MET288 ASN289 PRO290 THR291 ILE292 LYS293 LEU294 TYR295 VAL296 VAL297 ASN298 LEU299 TYR300 GLY301 PRO302 THR303 HIS304 THR305 LEU306 GLU307 LEU308 MET309 PRO310 PRO311 ASP312 SER313 PHE314 LYS315 SER316 ARG317 GLU318 TYR319 TYR320 ILE321 THR322 MET323 VAL324 LYS325 TRP326 VAL327 SER328 ASN329 THR330 LYS331 THR332 VAL333 VAL334 ARG335 TRP336 LEU337 ASN338 ARG339 ALA340 GLN341 ASN342 ILE343 SER344 ILE345 LEU346 THR347 VAL348 CYS349 GLU350 THR351 THR352 THR353 GLY354 ALA355 CYS356 SER357 LYS358 LYS359 TYR360 GLU361 MET362 THR363 SER364 ASP365 THR366 TRP367 LEU368 SER369 GLN370 GLN371 ASN372 GLU373 GLU374 PRO375 VAL376 PHE377 SER378 ARG379 ASP380 GLY381 SER382 LYS383 PHE384 PHE385 MET386 THR387 VAL388 PRO389 VAL390 LYS391 GLN392 GLY393 GLY394 ARG395 GLY396 GLU397 PHE398 HIS399 HIS400 ILE401 ALA402 MET403 PHE404 LEU405 ILE406 GLN407 SER408 LYS409 SER410 GLU411 GLN412 ILE413 THR414 VAL415 ARG416 HIS417 LEU418 THR419 SER420 GLY421 ASN422 TRP423 GLU424 VAL425 ILE426 LYS427 ILE428 LEU429 ALA430 TYR431 ASP432 GLU433 THR434 THR435 GLN436 LYS437 ILE438 TYR439 PHE440 LEU441 SER442 THR443 GLU444 SER445 SER446 PRO447 ARG448 GLY449 ARG450 GLN451 LEU452 TYR453 SER454 ALA455 SER456 THR457 GLU458 GLY459 LEU460 LEU461 ASN462 ARG463 GLN464 CYS465 ILE466 SER467 CYS468 ASN469 PHE470 MET471 LYS472 GLU473 GLN474 CYS475 THR476 TYR477 PHE478 ASP479 ALA480 SER481 PHE482 SER483 PRO484 MET485 ASN486 GLN487 HIS488 PHE489 LEU490 LEU491 PHE492 CYS493 GLU494 GLY495 PRO496 ARG497 VAL498 PRO499 VAL500 VAL501 SER502 LEU503 HIS504 SER505 THR506 ASP507 ASN508 PRO509 ALA510 LYS511 TYR512 PHE513 ILE514 LEU515 GLU516 SER517 ASN518 SER519 MET520 LEU521 LYS522 GLU523 ALA524 ILE525 LEU526 LYS527 LYS528 LYS529 ILE530 GLY531 LYS532 PRO533 GLU534 ILE535 LYS536 ILE537 LEU538 HIS539 ILE540 ASP541 ASP542 TYR543 GLU544 LEU545 PRO546 LEU547 GLN548 LEU549 SER550 LEU551 PRO552 LYS553 ASP554 PHE555 MET556 ASP557 ARG558 ASN559 GLN560 TYR561 ALA562 LEU563 LEU564 LEU565 ILE566 MET567 ASP568 GLU569 GLU570 PRO571 GLY572 GLY573 GLN574 LEU575 VAL576 THR577 ASP578 LYS579 PHE580 HIS581 ILE582 ASP583 TRP584 ASP585 SER586 VAL587 LEU588 ILE589 ASP590 MET591 ASP592 ASN593 VAL594 ILE595 VAL596 ALA597 ARG598 PHE599 ASP600 GLY601 ARG602 GLY603 SER604 GLY605 PHE606 GLN607 GLY608 LEU609 LYS610 ILE611 LEU612 GLN613 GLU614 ILE615 HIS616 ARG617 ARG618 LEU619 GLY620 SER621 VAL622 GLU623 VAL624 LYS625 ASP626 GLN627 ILE628 THR629 ALA630 VAL631 LYS632 PHE633 LEU634 LEU635 LYS636 LEU637 PRO638 TYR639 ILE640 ASP641 SER642 LYS643 ARG644 LEU645 SER646 ILE647 PHE648 GLY649 LYS650 GLY651 TYR652 GLY653 GLY654 TYR655 ILE656 ALA657 SER658 MET659 ILE660 LEU661 LYS662 SER663 ASP664 GLU665 LYS666 LEU667 PHE668 LYS669 CYS670 GLY671 SER672 VAL673 VAL674 ALA675 PRO676 ILE677 THR678 ASP679 LEU680 LYS681 LEU682 TYR683 ALA684 SER685 ALA686 PHE687 SER688 GLU689 ARG690 TYR691 LEU692 GLY693 MET694 PRO695 SER696 LYS697 GLU698 GLU699 SER700 THR701 TYR702 GLN703 ALA704 ALA705 SER706 VAL707 LEU708 HIS709 ASN710 VAL711 HIS712 GLY713 LEU714 LYS715 GLU716 GLU717 ASN718 ILE719 LEU720 ILE721 ILE722 HIS723 GLY724 THR725 ALA726 ASP727 THR728 LYS729 VAL730 HIS731 PHE732 GLN733 HIS734 SER735 ALA736 GLU737 LEU738 ILE739 LYS740 HIS741 LEU742 ILE743 LYS744 ALA745 GLY746 VAL747 ASN748 TYR749 THR750 MET751 GLN752 VAL753 TYR754 PRO755 ASP756 GLU757 GLY758 HIS759 ASN760 VAL761 SER762 GLU763 LYS764 SER765 LYS766 TYR767 HIS768 LEU769 TYR770 SER771 THR772 ILE773 LEU774 LYS775 PHE776 PHE777 SER778 ASP779 CYS780 LEU781 LYS782 GLU783
Ligands
Unit 3 NAG1 NAG2 BMA3 MAN4
Unit 4 NAG1 NAG2
Unit 5 NAG1 NAG2
Unit 6 NAG1 NAG2 BMA3
Unit 7 NAG1 NAG2
Unit 8 NAG801 NAG802
Unit 9 NAG801 NAG809
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany