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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MSL5 PROTEIN IN COMPLEX WITH RNA AT 1.8
Keywords MSL5, BBP, RNA BINDING, YEAST PRE-MRNA SPLICING, PROTEIN BIN COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4WAN     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BRANCHPOINT-BRIDGING PROTEIN  A 124 944 0
2  DNA/RNA    B 9 151 0
3  Protein   BRANCHPOINT-BRIDGING PROTEIN  C 125 962 0
4  DNA/RNA    D 10 163 0
5  Protein   BRANCHPOINT-BRIDGING PROTEIN  E 122 932 0
6  DNA/RNA    F 10 162 0
7  Protein   BRANCHPOINT-BRIDGING PROTEIN  G 116 896 0
8  DNA/RNA    H 9 151 0
9  Ligand   BRANCHPOINT-BRIDGING PROTEIN  A 3 0 15
10  Ligand   RNA (5'-R(P*UP*AP*CP*UP*AP*AP*CP*A)-3')  B 1 0 5
11  Ligand   BRANCHPOINT-BRIDGING PROTEIN  C 3 0 16
12  Ligand   BRANCHPOINT-BRIDGING PROTEIN  E 2 0 12
13  Ligand   BRANCHPOINT-BRIDGING PROTEIN  G 2 0 10
14 Water     477 0 477
total       1013 4361 535
Proteins
Unit 1 PRO145 THR146 LYS147 PHE148 GLN149 ASP150 LYS151 TYR152 TYR153 ILE154 PRO155 VAL156 ASP157 GLN158 TYR159 PRO160 ASP161 VAL162 ASN163 PHE164 VAL165 GLY166 LEU167 LEU168 LEU169 GLY170 PRO171 ARG172 GLY173 ARG174 THR175 LEU176 ARG177 LYS178 LEU179 GLN180 GLU181 ASP182 SER183 ASN184 CYS185 LYS186 ILE187 ALA188 ILE189 ARG190 GLY191 ARG192 GLY193 SER194 VAL195 LYS196 GLU197 GLY198 LYS199 ASN200 ALA201 SER202 ASP203 LEU204 PRO205 PRO206 GLY207 ALA208 MET209 ASN210 PHE211 GLU212 ASP213 PRO214 LEU215 HIS216 CYS217 LEU218 ILE219 ILE220 ALA221 ASP222 SER223 GLU224 ASP225 LYS226 ILE227 GLN228 LYS229 GLY230 ILE231 LYS232 VAL233 CYS234 GLN235 ASN236 ILE237 VAL238 ILE239 LYS240 ALA241 VAL242 THR243 SER244 PRO245 GLU246 GLY247 GLN248 ASN249 ASP250 LEU251 LYS252 ARG253 GLY254 GLN255 LEU256 ARG257 GLU258 LEU259 ALA260 GLU261 LEU262 ASN263 GLY264 THR265 LEU266 ARG267 GLU268
Unit 3 PRO145 THR146 LYS147 PHE148 GLN149 ASP150 LYS151 TYR152 TYR153 ILE154 PRO155 VAL156 ASP157 GLN158 TYR159 PRO160 ASP161 VAL162 ASN163 PHE164 VAL165 GLY166 LEU167 LEU168 LEU169 GLY170 PRO171 ARG172 GLY173 ARG174 THR175 LEU176 ARG177 LYS178 LEU179 GLN180 GLU181 ASP182 SER183 ASN184 CYS185 LYS186 ILE187 ALA188 ILE189 ARG190 GLY191 ARG192 GLY193 SER194 VAL195 LYS196 GLU197 GLY198 LYS199 ASN200 ALA201 SER202 ASP203 LEU204 PRO205 PRO206 GLY207 ALA208 MET209 ASN210 PHE211 GLU212 ASP213 PRO214 LEU215 HIS216 CYS217 LEU218 ILE219 ILE220 ALA221 ASP222 SER223 GLU224 ASP225 LYS226 ILE227 GLN228 LYS229 GLY230 ILE231 LYS232 VAL233 CYS234 GLN235 ASN236 ILE237 VAL238 ILE239 LYS240 ALA241 VAL242 THR243 SER244 PRO245 GLU246 GLY247 GLN248 ASN249 ASP250 LEU251 LYS252 ARG253 GLY254 GLN255 LEU256 ARG257 GLU258 LEU259 ALA260 GLU261 LEU262 ASN263 GLY264 THR265 LEU266 ARG267 GLU268 ASP269
Unit 5 THR146 LYS147 PHE148 GLN149 ASP150 LYS151 TYR152 TYR153 ILE154 PRO155 VAL156 ASP157 GLN158 TYR159 PRO160 ASP161 VAL162 ASN163 PHE164 VAL165 GLY166 LEU167 LEU168 LEU169 GLY170 PRO171 ARG172 GLY173 ARG174 THR175 LEU176 ARG177 LYS178 LEU179 GLN180 GLU181 ASP182 SER183 ASN184 CYS185 LYS186 ILE187 ALA188 ILE189 ARG190 GLY191 ARG192 GLY193 SER194 VAL195 LYS196 GLU197 GLY198 LYS199 ASN200 ALA201 SER202 ASP203 LEU204 PRO205 PRO206 GLY207 ALA208 MET209 ASN210 PHE211 GLU212 ASP213 PRO214 LEU215 HIS216 CYS217 LEU218 ILE219 ILE220 ALA221 ASP222 SER223 GLU224 ASP225 LYS226 ILE227 GLN228 LYS229 GLY230 ILE231 LYS232 VAL233 CYS234 GLN235 ASN236 ILE237 VAL238 ILE239 LYS240 ALA241 VAL242 THR243 SER244 PRO245 GLU246 GLY247 GLN248 ASN249 ASP250 LEU251 LYS252 ARG253 GLY254 GLN255 LEU256 ARG257 GLU258 LEU259 ALA260 GLU261 LEU262 ASN263 GLY264 THR265 LEU266 ARG267
Unit 7 LYS147 PHE148 GLN149 ASP150 LYS151 TYR152 TYR153 ILE154 PRO155 VAL156 ASP157 GLN158 TYR159 PRO160 ASP161 VAL162 ASN163 PHE164 VAL165 GLY166 LEU167 LEU168 LEU169 GLY170 PRO171 ARG172 GLY173 ARG174 THR175 LEU176 ARG177 LYS178 LEU179 GLN180 GLU181 ASP182 SER183 ASN184 CYS185 LYS186 ILE187 ALA188 ILE189 ARG190 GLY191 ARG192 GLY193 SER194 VAL195 LYS196 GLU197 LEU204 PRO205 PRO206 GLY207 ALA208 MET209 ASN210 PHE211 GLU212 ASP213 PRO214 LEU215 HIS216 CYS217 LEU218 ILE219 ILE220 ALA221 ASP222 SER223 GLU224 ASP225 LYS226 ILE227 GLN228 LYS229 GLY230 ILE231 LYS232 VAL233 CYS234 GLN235 ASN236 ILE237 VAL238 ILE239 LYS240 ALA241 VAL242 THR243 SER244 PRO245 GLU246 GLY247 GLN248 ASN249 ASP250 LEU251 LYS252 ARG253 GLY254 GLN255 LEU256 ARG257 GLU258 LEU259 ALA260 GLU261 LEU262 ASN263 GLY264 THR265 LEU266 ARG267 GLU268
Nucleic acids
Unit 2 A2 U3 A4 C5 U6 A7 A8 C9 A10
Unit 4 U1 A2 U3 A4 C5 U6 A7 A8 C9 A10
Unit 6 U1 A2 U3 A4 C5 U6 A7 A8 C9 A10
Unit 8 A2 U3 A4 C5 U6 A7 A8 C9 A10
Ligands
Unit 9 SO4301 GOL302 ACT303
Unit 10 SO4101
Unit 11 GOL301 GOL302 ACT303
Unit 12 GOL301 GOL302
Unit 13 SO4301 SO4302
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany