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Sequence, Chains, Asymmetric and Biological Units

Title PVHL:ELOB:ELOC IN COMPLEX WITH (2S,4R)-1-((S)-2-((S)-2-ACETA PHENYLPROPANAMIDO)-3,3-DIMETHYLBUTANOYL)-4-HYDROXY-N-(4-(4- METHYLTHIAZOL-5-YL)BENZYL)PYRROLIDINE-2-CARBOXAMIDE (LIGAND
Keywords PROTEIN COMPLEX, UBIQUITIN LIGASE, HYPOXIA INDUCIBLE FACTOR, TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4W9K     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2  A 103 791 18
2  Protein   TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1  B 86 682 0
3  Protein   VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR  C 141 1110 9
4  Protein   TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2  D 102 773 18
5  Protein   TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1  E 88 689 0
6  Protein   VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR  F 144 1119 9
7  Protein   TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2  G 103 794 18
8  Protein   TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1  H 88 684 0
9  Protein   VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR  I 142 1124 9
10  Protein   TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2  J 103 794 18
11  Protein   TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1  K 88 691 0
12  Protein   VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR  L 143 1134 9
13  Ligand   VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR  C 1 0 44
14  Ligand   VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR  F 1 0 44
15  Ligand   VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR  I 1 0 44
16  Ligand   VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR  L 1 0 44
17 Water     347 0 347
total       1682 10385 631

Proteins
Unit 1 MET1 ASP2 VAL3 PHE4 LEU5 MET6 ILE7 ARG8 ARG9 HIS10 LYS11 THR12 THR13 ILE14 PHE15 THR16 ASP17 ALA18 LYS19 GLU20 SER21 SER22 THR23 VAL24 PHE25 GLU26 LEU27 LYS28 ARG29 ILE30 VAL31 GLU32 GLY33 ILE34 LEU35 LYS36 ARG37 PRO38 PRO39 ASP40 GLU41 GLN42 ARG43 LEU44 TYR45 LYS46 ASP47 ASP48 GLN49 LEU50 LEU51 ASP52 ASP53 GLY54 LYS55 THR56 LEU57 GLY58 GLU59 CAS60 GLY61 PHE62 THR63 SER64 GLN65 THR66 ALA67 ARG68 PRO69 GLN70 ALA71 PRO72 ALA73 THR74 VAL75 GLY76 LEU77 ALA78 PHE79 ARG80 ALA81 ASP82 ASP83 THR84 PHE85 GLU86 ALA87 LEU88 CAS89 ILE90 GLU91 PRO92 PHE93 SER94 SER95 PRO96 PRO97 GLU98 LEU99 PRO100 ASP101 VAL102 MET103
Unit 2 MET17 TYR18 VAL19 LYS20 LEU21 ILE22 SER23 SER24 ASP25 GLY26 HIS27 GLU28 PHE29 ILE30 VAL31 LYS32 ARG33 GLU34 HIS35 ALA36 LEU37 THR38 SER39 GLY40 THR41 ILE42 LYS43 ALA44 MET45 LEU46 SER47 ASN58 GLU59 VAL60 ASN61 PHE62 ARG63 GLU64 ILE65 PRO66 SER67 HIS68 VAL69 LEU70 SER71 LYS72 VAL73 CYS74 MET75 TYR76 PHE77 THR78 TYR79 LYS80 VAL81 ARG82 TYR83 THR84 ASN85 SER86 SER87 THR88 GLU89 ILE90 PRO91 GLU92 PHE93 PRO94 ILE95 ALA96 PRO97 GLU98 ILE99 ALA100 LEU101 GLU102 LEU103 LEU104 MET105 ALA106 ALA107 ASN108 PHE109 LEU110 ASP111 CYS112
Unit 3 VAL62 LEU63 ARG64 SER65 VAL66 ASN67 SER68 ARG69 GLU70 PRO71 SER72 GLN73 VAL74 ILE75 PHE76 CAS77 ASN78 ARG79 SER80 PRO81 ARG82 VAL83 VAL84 LEU85 PRO86 VAL87 TRP88 LEU89 ASN90 PHE91 ASP92 GLY93 GLU94 PRO95 GLN96 PRO97 TYR98 PRO99 THR100 LEU101 PRO102 PRO103 GLY104 THR105 GLY106 ARG107 ARG108 ILE109 HIS110 SER111 TYR112 ARG113 GLY114 HIS115 LEU116 TRP117 LEU118 PHE119 ARG120 ASP121 ALA122 GLY123 THR124 HIS125 ASP126 GLY127 LEU128 LEU129 VAL130 ASN131 GLN132 THR133 GLU134 LEU135 PHE136 VAL137 PRO138 SER139 LEU140 ASN141 VAL142 ASP143 GLY144 GLN145 PRO146 ILE147 PHE148 ALA149 ASN150 ILE151 THR152 LEU153 PRO154 VAL155 TYR156 THR157 LEU158 LYS159 GLU160 ARG161 CYS162 LEU163 GLN164 VAL165 VAL166 ARG167 SER168 LEU169 VAL170 LYS171 PRO172 GLU173 ASN174 TYR175 ARG176 ARG177 LEU178 ASP179 ILE180 VAL181 ARG182 SER183 LEU184 TYR185 GLU186 ASP187 LEU188 GLU189 ASP190 HIS191 PRO192 ASN193 VAL194 GLN195 LYS196 ASP197 LEU198 GLU199 ARG200 LEU201 THR202
Unit 4 MET1 ASP2 VAL3 PHE4 LEU5 MET6 ILE7 ARG8 ARG9 HIS10 LYS11 THR12 THR13 ILE14 PHE15 THR16 ASP17 ALA18 LYS19 GLU20 SER21 SER22 THR23 VAL24 PHE25 GLU26 LEU27 LYS28 ARG29 ILE30 VAL31 GLU32 GLY33 ILE34 LEU35 LYS36 ARG37 PRO38 PRO39 ASP40 GLU41 GLN42 ARG43 LEU44 TYR45 LYS46 ASP47 ASP48 GLN49 LEU50 LEU51 ASP52 ASP53 GLY54 LYS55 THR56 LEU57 GLY58 GLU59 CAS60 GLY61 PHE62 THR63 SER64 GLN65 THR66 ALA67 ARG68 PRO69 GLN70 ALA71 PRO72 ALA73 THR74 VAL75 GLY76 LEU77 ALA78 PHE79 ARG80 ALA81 ASP83 THR84 PHE85 GLU86 ALA87 LEU88 CAS89 ILE90 GLU91 PRO92 PHE93 SER94 SER95 PRO96 PRO97 GLU98 LEU99 PRO100 ASP101 VAL102 MET103
Unit 5 MET17 TYR18 VAL19 LYS20 LEU21 ILE22 SER23 SER24 ASP25 GLY26 HIS27 GLU28 PHE29 ILE30 VAL31 LYS32 ARG33 GLU34 HIS35 ALA36 LEU37 THR38 SER39 GLY40 THR41 ILE42 LYS43 ALA44 MET45 LEU46 SER47 GLY48 THR57 ASN58 GLU59 VAL60 ASN61 PHE62 ARG63 GLU64 ILE65 PRO66 SER67 HIS68 VAL69 LEU70 SER71 LYS72 VAL73 CYS74 MET75 TYR76 PHE77 THR78 TYR79 LYS80 VAL81 ARG82 TYR83 THR84 ASN85 SER86 SER87 THR88 GLU89 ILE90 PRO91 GLU92 PHE93 PRO94 ILE95 ALA96 PRO97 GLU98 ILE99 ALA100 LEU101 GLU102 LEU103 LEU104 MET105 ALA106 ALA107 ASN108 PHE109 LEU110 ASP111 CYS112
Unit 6 VAL62 LEU63 ARG64 SER65 VAL66 ASN67 SER68 ARG69 GLU70 PRO71 SER72 GLN73 VAL74 ILE75 PHE76 CAS77 ASN78 ARG79 SER80 PRO81 ARG82 VAL83 VAL84 LEU85 PRO86 VAL87 TRP88 LEU89 ASN90 PHE91 ASP92 GLY93 GLU94 PRO95 GLN96 PRO97 TYR98 PRO99 THR100 LEU101 PRO102 PRO103 GLY104 THR105 GLY106 ARG107 ARG108 ILE109 HIS110 SER111 TYR112 ARG113 GLY114 HIS115 LEU116 TRP117 LEU118 PHE119 ARG120 ASP121 ALA122 GLY123 THR124 HIS125 ASP126 GLY127 LEU128 LEU129 VAL130 ASN131 GLN132 THR133 GLU134 LEU135 PHE136 VAL137 PRO138 SER139 LEU140 ASN141 VAL142 ASP143 GLY144 GLN145 PRO146 ILE147 PHE148 ALA149 ASN150 ILE151 THR152 LEU153 PRO154 VAL155 TYR156 THR157 LEU158 LYS159 GLU160 ARG161 CYS162 LEU163 GLN164 VAL165 VAL166 ARG167 SER168 LEU169 VAL170 LYS171 PRO172 GLU173 ASN174 TYR175 ARG176 ARG177 LEU178 ASP179 ILE180 VAL181 ARG182 SER183 LEU184 TYR185 GLU186 ASP187 LEU188 GLU189 ASP190 HIS191 PRO192 ASN193 VAL194 GLN195 LYS196 ASP197 LEU198 GLU199 ARG200 LEU201 THR202 GLN203 GLU204 ARG205
Unit 7 MET1 ASP2 VAL3 PHE4 LEU5 MET6 ILE7 ARG8 ARG9 HIS10 LYS11 THR12 THR13 ILE14 PHE15 THR16 ASP17 ALA18 LYS19 GLU20 SER21 SER22 THR23 VAL24 PHE25 GLU26 LEU27 LYS28 ARG29 ILE30 VAL31 GLU32 GLY33 ILE34 LEU35 LYS36 ARG37 PRO38 PRO39 ASP40 GLU41 GLN42 ARG43 LEU44 TYR45 LYS46 ASP47 ASP48 GLN49 LEU50 LEU51 ASP52 ASP53 GLY54 LYS55 THR56 LEU57 GLY58 GLU59 CAS60 GLY61 PHE62 THR63 SER64 GLN65 THR66 ALA67 ARG68 PRO69 GLN70 ALA71 PRO72 ALA73 THR74 VAL75 GLY76 LEU77 ALA78 PHE79 ARG80 ALA81 ASP82 ASP83 THR84 PHE85 GLU86 ALA87 LEU88 CAS89 ILE90 GLU91 PRO92 PHE93 SER94 SER95 PRO96 PRO97 GLU98 LEU99 PRO100 ASP101 VAL102 MET103
Unit 8 MET17 TYR18 VAL19 LYS20 LEU21 ILE22 SER23 SER24 ASP25 GLY26 HIS27 GLU28 PHE29 ILE30 VAL31 LYS32 ARG33 GLU34 HIS35 ALA36 LEU37 THR38 SER39 GLY40 THR41 ILE42 LYS43 ALA44 MET45 LEU46 SER47 GLY48 THR57 ASN58 GLU59 VAL60 ASN61 PHE62 ARG63 GLU64 ILE65 PRO66 SER67 HIS68 VAL69 LEU70 SER71 LYS72 VAL73 CYS74 MET75 TYR76 PHE77 THR78 TYR79 LYS80 VAL81 ARG82 TYR83 THR84 ASN85 SER86 SER87 THR88 GLU89 ILE90 PRO91 GLU92 PHE93 PRO94 ILE95 ALA96 PRO97 GLU98 ILE99 ALA100 LEU101 GLU102 LEU103 LEU104 MET105 ALA106 ALA107 ASN108 PHE109 LEU110 ASP111 CYS112
Unit 9 VAL62 LEU63 ARG64 SER65 VAL66 ASN67 SER68 ARG69 GLU70 PRO71 SER72 GLN73 VAL74 ILE75 PHE76 CAS77 ASN78 ARG79 SER80 PRO81 ARG82 VAL83 VAL84 LEU85 PRO86 VAL87 TRP88 LEU89 ASN90 PHE91 ASP92 GLY93 GLU94 PRO95 GLN96 PRO97 TYR98 PRO99 THR100 LEU101 PRO102 PRO103 GLY104 THR105 GLY106 ARG107 ARG108 ILE109 HIS110 SER111 TYR112 ARG113 GLY114 HIS115 LEU116 TRP117 LEU118 PHE119 ARG120 ASP121 ALA122 GLY123 THR124 HIS125 ASP126 GLY127 LEU128 LEU129 VAL130 ASN131 GLN132 THR133 GLU134 LEU135 PHE136 VAL137 PRO138 SER139 LEU140 ASN141 VAL142 ASP143 GLY144 GLN145 PRO146 ILE147 PHE148 ALA149 ASN150 ILE151 THR152 LEU153 PRO154 VAL155 TYR156 THR157 LEU158 LYS159 GLU160 ARG161 CYS162 LEU163 GLN164 VAL165 VAL166 ARG167 SER168 LEU169 VAL170 LYS171 PRO172 GLU173 ASN174 TYR175 ARG176 ARG177 LEU178 ASP179 ILE180 VAL181 SER183 LEU184 TYR185 GLU186 ASP187 LEU188 GLU189 ASP190 HIS191 PRO192 ASN193 VAL194 GLN195 LYS196 ASP197 LEU198 GLU199 ARG200 LEU201 THR202 GLN203 GLU204
Unit 10 MET1 ASP2 VAL3 PHE4 LEU5 MET6 ILE7 ARG8 ARG9 HIS10 LYS11 THR12 THR13 ILE14 PHE15 THR16 ASP17 ALA18 LYS19 GLU20 SER21 SER22 THR23 VAL24 PHE25 GLU26 LEU27 LYS28 ARG29 ILE30 VAL31 GLU32 GLY33 ILE34 LEU35 LYS36 ARG37 PRO38 PRO39 ASP40 GLU41 GLN42 ARG43 LEU44 TYR45 LYS46 ASP47 ASP48 GLN49 LEU50 LEU51 ASP52 ASP53 GLY54 LYS55 THR56 LEU57 GLY58 GLU59 CAS60 GLY61 PHE62 THR63 SER64 GLN65 THR66 ALA67 ARG68 PRO69 GLN70 ALA71 PRO72 ALA73 THR74 VAL75 GLY76 LEU77 ALA78 PHE79 ARG80 ALA81 ASP82 ASP83 THR84 PHE85 GLU86 ALA87 LEU88 CAS89 ILE90 GLU91 PRO92 PHE93 SER94 SER95 PRO96 PRO97 GLU98 LEU99 PRO100 ASP101 VAL102 MET103
Unit 11 MET16 MET17 TYR18 VAL19 LYS20 LEU21 ILE22 SER23 SER24 ASP25 GLY26 HIS27 GLU28 PHE29 ILE30 VAL31 LYS32 ARG33 GLU34 HIS35 ALA36 LEU37 THR38 SER39 GLY40 THR41 ILE42 LYS43 ALA44 MET45 LEU46 SER47 THR57 ASN58 GLU59 VAL60 ASN61 PHE62 ARG63 GLU64 ILE65 PRO66 SER67 HIS68 VAL69 LEU70 SER71 LYS72 VAL73 CYS74 MET75 TYR76 PHE77 THR78 TYR79 LYS80 VAL81 ARG82 TYR83 THR84 ASN85 SER86 SER87 THR88 GLU89 ILE90 PRO91 GLU92 PHE93 PRO94 ILE95 ALA96 PRO97 GLU98 ILE99 ALA100 LEU101 GLU102 LEU103 LEU104 MET105 ALA106 ALA107 ASN108 PHE109 LEU110 ASP111 CYS112
Unit 12 VAL62 LEU63 ARG64 SER65 VAL66 ASN67 SER68 ARG69 GLU70 PRO71 SER72 GLN73 VAL74 ILE75 PHE76 CAS77 ASN78 ARG79 SER80 PRO81 ARG82 VAL83 VAL84 LEU85 PRO86 VAL87 TRP88 LEU89 ASN90 PHE91 ASP92 GLY93 GLU94 PRO95 GLN96 PRO97 TYR98 PRO99 THR100 LEU101 PRO102 PRO103 GLY104 THR105 GLY106 ARG107 ARG108 ILE109 HIS110 SER111 TYR112 ARG113 GLY114 HIS115 LEU116 TRP117 LEU118 PHE119 ARG120 ASP121 ALA122 GLY123 THR124 HIS125 ASP126 GLY127 LEU128 LEU129 VAL130 ASN131 GLN132 THR133 GLU134 LEU135 PHE136 VAL137 PRO138 SER139 LEU140 ASN141 VAL142 ASP143 GLY144 GLN145 PRO146 ILE147 PHE148 ALA149 ASN150 ILE151 THR152 LEU153 PRO154 VAL155 TYR156 THR157 LEU158 LYS159 GLU160 ARG161 CYS162 LEU163 GLN164 VAL165 VAL166 ARG167 SER168 LEU169 VAL170 LYS171 PRO172 GLU173 ASN174 TYR175 ARG176 ARG177 LEU178 ASP179 ILE180 VAL181 ARG182 SER183 LEU184 TYR185 GLU186 ASP187 LEU188 GLU189 ASP190 HIS191 PRO192 ASN193 VAL194 GLN195 LYS196 ASP197 LEU198 GLU199 ARG200 LEU201 THR202 GLN203 GLU204

Ligands
Unit 13 3JO301
Unit 14 3JO301
Unit 15 3JO301
Unit 16 3JO301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany