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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BACILLUS SUBTILIS CYCLIC-DI-AMP RIBOSWI
Keywords RIBOSWITCH, CYCLIC-DI-AMP, PROTEIN-RNA COMPLEX, RNA BINDING RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4W90     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A  B 90 615 24
2  RNA    C 101 2146 0
3  Ligand   RIBOSWITCH A PSEUDO-DIMERIC RNA  C 7 0 93
total       198 2761 117

Proteins
Unit 1 ARG7 PRO8 ASN9 HIS10 THR11 ILE12 TYR13 ILE14 ASN15 ASN16 LEU17 ASN18 GLU19 LYS20 ILE21 LYS22 LYS23 ASP24 GLU25 LEU26 LYS27 LYS28 SER29 LEU30 HIS31 ALA32 ILE33 PHE34 SER35 ARG36 PHE37 GLY38 GLN39 ILE40 LEU41 ASP42 ILE43 LEU44 VAL45 SER46 ARG47 SER48 LEU49 LYS50 MSE51 ARG52 GLY53 GLN54 ALA55 PHE56 VAL57 ILE58 PHE59 LYS60 GLU61 VAL62 SER63 SER64 ALA65 THR66 ASN67 ALA68 LEU69 ARG70 SER71 MSE72 GLN73 GLY74 PHE75 PRO76 PHE77 TYR78 ASP79 LYS80 PRO81 MSE82 ARG83 ILE84 GLN85 TYR86 ALA87 LYS88 THR89 ASP90 SER91 ASP92 ILE93 ILE94 ALA95 LYS96

Nucleic acids
Unit 2 G1 C2 G3 C4 G5 C6 U7 U8 A9 A10 U11 C12 U13 G14 A15 A16 A17 U18 C19 A20 G21 A22 G23 C24 G25 G26 G27 G28 G29 A30 C31 C32 C33 A34 U35 U36 G37 C38 A39 C40 A57 G58 G59 G60 G61 U62 G63 A64 A65 U66 C67 C68 U69 U70 U73 A74 G75 G76 U77 A78 G79 G80 G81 C82 G83 A84 A85 A86 G87 C88 C89 C90 G91 A92 A93 U94 C95 C96 G97 U98 C99 A100 G101 C102 U103 A104 A105 C106 C107 U108 C109 G110 U111 A112 A113 G114 C115 G116 C117 G118 C119

Ligands
Unit 3 2BA201 2BA202 MG203 MG204 MG205 MG206 MG207

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany