4V3D - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CIDRA DOMAIN FROM HB3VAR03 PFEMP1 BOUND TO ENDOTHELIAL P RECEPTOR
• Keywords: SIGNALING PROTEIN, PFEMP1, EPCR, MALARIA, CIDR DOMAIN, ENDOT PROTEIN C RECEPTOR
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4V3D	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HB3VAR03 CIDRA DOMAIN	A	210	1755	0
2	Protein	ENDOTHELIAL PROTEIN C RECEPTOR	B	169	1384	0
3	Protein	HB3VAR03 CIDRA DOMAIN	C	186	1578	0
4	Protein	ENDOTHELIAL PROTEIN C RECEPTOR	D	168	1376	0
5	Ligand		E	2	0	28
6	Ligand		F	3	0	39
7	Ligand		G	2	0	28
8	Ligand		H	3	0	39
9	Ligand		I	2	0	28
10	Ligand	ENDOTHELIAL PROTEIN C RECEPTOR	B	3	0	78
11	Ligand	ENDOTHELIAL PROTEIN C RECEPTOR	D	2	0	64
total				750	6093	304

Proteins

Unit 1	GLY 499 ASP 500 ALA 501 LYS 502 ASN 503 THR 504 GLU 505 ILE 506 ASN 507 VAL 508 ILE 509 ASN 510 SER 511 GLY 512 ASP 513 LYS 514 GLU 515 GLY 516 TYR 517 ILE 518 PHE 519 GLU 520 LYS 521 LEU 522 SER 523 GLU 524 PHE 525 CYS 526 THR 527 ASN 528 GLU 529 ASN 530 ASN 531 GLU 532 ASN 533 GLY 534 LYS 535 ASN 536 TYR 537 GLU 538 GLN 539 TRP 540 LYS 541 CYS 542 TYR 543 TYR 544 ASP 545 ASN 546 LYS 547 LYS 548 ASN 549 ASN 550 ASN 551 LYS 552 CYS 553 LYS 554 MET 555 GLU 556 ILE 557 ASN 558 ILE 559 ALA 560 ASN 561 SER 562 LYS 563 LEU 564 LYS 565 ASN 566 LYS 567 VAL 568 THR 569 SER 570 PHE 571 ASP 572 GLU 573 PHE 574 PHE 575 ASP 576 PHE 577 TRP 578 VAL 579 ARG 580 LYS 581 LEU 582 LEU 583 ILE 584 ASP 585 THR 586 ILE 587 LYS 588 TRP 589 GLU 590 THR 591 GLU 592 LEU 593 THR 594 TYR 595 CYS 596 ILE 597 ASN 598 ASN 599 THR 600 ASP 601 VAL 602 THR 603 ASP 604 CYS 605 ASN 606 LYS 607 CYS 608 ASN 609 LYS 610 ASN 611 CYS 612 VAL 613 CYS 614 PHE 615 ASP 616 LYS 617 TRP 618 VAL 619 LYS 620 GLN 621 LYS 622 GLU 623 ASP 624 GLU 625 TRP 626 THR 627 ASN 628 ILE 629 MET 630 LYS 631 LEU 632 PHE 633 THR 634 ASN 635 LYS 636 HIS 637 ASP 638 ILE 639 PRO 640 LYS 641 LYS 642 TYR 643 TYR 644 LEU 645 ASN 646 ILE 647 ASN 648 ASP 649 LEU 650 PHE 651 ASP 652 SER 653 PHE 654 PHE 655 PHE 656 GLN 657 VAL 658 ILE 659 TYR 660 LYS 661 PHE 662 ASN 663 GLU 664 GLY 665 GLU 666 ALA 667 LYS 668 TRP 669 ASN 670 GLU 671 LEU 672 LYS 673 GLU 674 ASN 675 LEU 676 LYS 677 LYS 678 GLN 679 ILE 680 ALA 681 SER 682 SER 683 SER 692 GLU 693 ALA 694 ALA 695 ILE 696 LYS 697 VAL 698 LEU 699 PHE 700 ASN 701 HIS 702 ILE 703 LYS 704 GLU 705 ILE 706 ALA 707 THR 708 ILE 709 CYS 710 LYS 711 ASP 712 ASN 713 ASN 714 THR 715 ASN 716
Unit 2	GLN 9 ARG 10 LEU 11 HIS 12 MET 13 LEU 14 GLN 15 ILE 16 SER 17 TYR 18 PHE 19 ARG 20 ASP 21 PRO 22 TYR 23 HIS 24 VAL 25 TRP 26 TYR 27 GLN 28 GLY 29 ASN 30 ALA 31 SER 32 LEU 33 GLY 34 GLY 35 HIS 36 LEU 37 THR 38 HIS 39 VAL 40 LEU 41 GLU 42 GLY 43 PRO 44 ASP 45 THR 46 ASN 47 THR 48 THR 49 ILE 50 ILE 51 GLN 52 LEU 53 GLN 54 PRO 55 LEU 56 GLN 57 GLU 58 PRO 59 GLU 60 SER 61 TRP 62 ALA 63 ARG 64 THR 65 GLN 66 SER 67 GLY 68 LEU 69 GLN 70 SER 71 TYR 72 LEU 73 LEU 74 GLN 75 PHE 76 HIS 77 GLY 78 LEU 79 VAL 80 ARG 81 LEU 82 VAL 83 HIS 84 GLN 85 GLU 86 ARG 87 THR 88 LEU 89 ALA 90 PHE 91 PRO 92 LEU 93 THR 94 ILE 95 ARG 96 CYS 97 PHE 98 LEU 99 GLY 100 CYS 101 GLU 102 LEU 103 PRO 104 PRO 105 GLU 106 GLY 107 SER 108 ARG 109 ALA 110 HIS 111 VAL 112 PHE 113 PHE 114 GLU 115 VAL 116 ALA 117 VAL 118 ASN 119 GLY 120 SER 121 SER 122 PHE 123 VAL 124 SER 125 PHE 126 ARG 127 PRO 128 GLU 129 ARG 130 ALA 131 LEU 132 TRP 133 GLN 134 ALA 135 ASP 136 THR 137 GLN 138 VAL 139 THR 140 SER 141 GLY 142 VAL 143 VAL 144 THR 145 PHE 146 THR 147 LEU 148 GLN 149 GLN 150 LEU 151 ASN 152 ALA 153 TYR 154 ASN 155 ARG 156 THR 157 ARG 158 TYR 159 GLU 160 LEU 161 ARG 162 GLU 163 PHE 164 LEU 165 GLU 166 ASP 167 THR 168 CYS 169 VAL 170 GLN 171 TYR 172 VAL 173 GLN 174 LYS 175 HIS 176 ILE 177
Unit 3	ASN 503 THR 504 GLU 505 ILE 506 ASN 507 VAL 508 ILE 509 ASN 510 SER 511 GLY 512 ASP 513 LYS 514 GLU 515 GLY 516 TYR 517 ILE 518 PHE 519 GLU 520 LYS 521 LEU 522 SER 523 GLU 524 PHE 525 CYS 526 THR 527 ASN 528 ASN 536 TYR 537 GLU 538 GLN 539 TRP 540 LYS 541 CYS 542 TYR 543 TYR 544 ASP 545 ASN 546 LYS 547 LYS 548 ASN 549 ASN 550 ASN 551 LYS 552 CYS 553 LYS 554 MET 555 GLU 556 ILE 557 LYS 565 ASN 566 LYS 567 VAL 568 THR 569 SER 570 PHE 571 ASP 572 GLU 573 PHE 574 PHE 575 ASP 576 PHE 577 TRP 578 VAL 579 ARG 580 LYS 581 LEU 582 LEU 583 ILE 584 ASP 585 THR 586 ILE 587 LYS 588 TRP 589 GLU 590 THR 591 GLU 592 LEU 593 THR 594 TYR 595 CYS 596 ILE 597 CYS 605 ASN 606 LYS 607 CYS 608 ASN 609 LYS 610 ASN 611 CYS 612 VAL 613 CYS 614 PHE 615 ASP 616 LYS 617 TRP 618 VAL 619 LYS 620 GLN 621 LYS 622 GLU 623 ASP 624 GLU 625 TRP 626 THR 627 ASN 628 ILE 629 MET 630 LYS 631 LEU 632 PHE 633 THR 634 ASN 635 LYS 636 HIS 637 ASP 638 ILE 639 PRO 640 LYS 641 LYS 642 TYR 643 TYR 644 LEU 645 ASN 646 ILE 647 ASN 648 ASP 649 LEU 650 PHE 651 ASP 652 SER 653 PHE 654 PHE 655 PHE 656 GLN 657 VAL 658 ILE 659 TYR 660 LYS 661 PHE 662 ASN 663 GLU 664 GLY 665 GLU 666 ALA 667 LYS 668 TRP 669 ASN 670 GLU 671 LEU 672 LYS 673 GLU 674 ASN 675 LEU 676 LYS 677 LYS 678 GLN 679 ILE 680 ALA 681 SER 682 SER 683 LYS 684 SER 692 GLU 693 ALA 694 ALA 695 ILE 696 LYS 697 VAL 698 LEU 699 PHE 700 ASN 701 HIS 702 ILE 703 LYS 704 GLU 705 ILE 706 ALA 707 THR 708 ILE 709 CYS 710 LYS 711 ASP 712 ASN 713 ASN 714 THR 715 ASN 716
Unit 4	GLN 9 ARG 10 LEU 11 HIS 12 MET 13 LEU 14 GLN 15 ILE 16 SER 17 TYR 18 PHE 19 ARG 20 ASP 21 PRO 22 TYR 23 HIS 24 VAL 25 TRP 26 TYR 27 GLN 28 GLY 29 ASN 30 ALA 31 SER 32 LEU 33 GLY 34 GLY 35 HIS 36 LEU 37 THR 38 HIS 39 VAL 40 LEU 41 GLU 42 GLY 43 PRO 44 ASP 45 THR 46 ASN 47 THR 48 THR 49 ILE 50 ILE 51 GLN 52 LEU 53 GLN 54 PRO 55 LEU 56 GLN 57 GLU 58 PRO 59 GLU 60 SER 61 TRP 62 ALA 63 ARG 64 THR 65 GLN 66 SER 67 GLY 68 LEU 69 GLN 70 SER 71 TYR 72 LEU 73 LEU 74 GLN 75 PHE 76 HIS 77 GLY 78 LEU 79 VAL 80 ARG 81 LEU 82 VAL 83 HIS 84 GLN 85 GLU 86 ARG 87 THR 88 LEU 89 ALA 90 PHE 91 PRO 92 LEU 93 THR 94 ILE 95 ARG 96 CYS 97 PHE 98 LEU 99 GLY 100 CYS 101 GLU 102 LEU 103 PRO 104 PRO 105 GLU 106 GLY 107 SER 108 ARG 109 ALA 110 HIS 111 VAL 112 PHE 113 PHE 114 GLU 115 VAL 116 ALA 117 VAL 118 ASN 119 GLY 120 SER 121 SER 122 PHE 123 VAL 124 SER 125 PHE 126 ARG 127 PRO 128 GLU 129 ARG 130 ALA 131 LEU 132 TRP 133 GLN 134 ALA 135 ASP 136 THR 137 GLN 138 VAL 139 THR 140 SER 141 GLY 142 VAL 143 VAL 144 THR 145 PHE 146 THR 147 LEU 148 GLN 149 GLN 150 LEU 151 ASN 152 ALA 153 TYR 154 ASN 155 ARG 156 THR 157 ARG 158 TYR 159 GLU 160 LEU 161 ARG 162 GLU 163 PHE 164 LEU 165 GLU 166 ASP 167 THR 168 CYS 169 VAL 170 GLN 171 TYR 172 VAL 173 GLN 174 LYS 175 HIS 176

Ligands

Unit 5	NAG 1 NAG 2
Unit 6	NAG 1 NAG 2 MAN 3
Unit 7	NAG 1 NAG 2
Unit 8	NAG 1 NAG 2 MAN 3
Unit 9	NAG 1 NAG 2
Unit 10	PTY 200 NAG 205 NAG 206
Unit 11	PTY 200 NAG 208