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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HFQ IN COMPLEX WITH THE SRNA RYDC
Keywords RNA BINDING PROTEIN-RNA COMPLEX, NATIVELY UNSTRUCTURED PROTE PROTEIN-RNA RECOGNITION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4V2S     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA-BINDING PROTEIN HFQ  A 71 547 0
2  Protein   RNA-BINDING PROTEIN HFQ  B 70 542 0
3  Protein   RNA-BINDING PROTEIN HFQ  C 68 531 0
4  Protein   RNA-BINDING PROTEIN HFQ  D 71 543 0
5  Protein   RNA-BINDING PROTEIN HFQ  E 67 522 0
6  Protein   RNA-BINDING PROTEIN HFQ  F 70 553 0
7  DNA/RNA    Q 58 1187 0
8 Water     45 0 45
total       520 4425 45
Proteins
Unit 1 GLY4 GLN5 SER6 LEU7 GLN8 ASP9 PRO10 PHE11 LEU12 ASN13 ALA14 LEU15 ARG16 ARG17 GLU18 ARG19 VAL20 PRO21 VAL22 SER23 ILE24 TYR25 LEU26 VAL27 ASN28 GLY29 ILE30 LYS31 LEU32 GLN33 GLY34 GLN35 ILE36 GLU37 SER38 PHE39 ASP40 GLN41 PHE42 VAL43 ILE44 LEU45 LEU46 LYS47 ASN48 THR49 VAL50 SER51 GLN52 MET53 VAL54 TYR55 LYS56 HIS57 ALA58 ILE59 SER60 THR61 VAL62 VAL63 PRO64 SER65 ARG66 PRO67 VAL68 SER69 HIS70 HIS71 SER72 ASN73 ASN74
Unit 2 MET1 ALA2 LYS3 GLY4 GLN5 SER6 LEU7 GLN8 ASP9 PRO10 PHE11 LEU12 ASN13 ALA14 LEU15 ARG16 ARG17 GLU18 ARG19 VAL20 PRO21 VAL22 SER23 ILE24 TYR25 LEU26 VAL27 ASN28 GLY29 ILE30 LYS31 LEU32 GLN33 GLY34 GLN35 ILE36 GLU37 SER38 PHE39 ASP40 GLN41 PHE42 VAL43 ILE44 LEU45 LEU46 LYS47 ASN48 THR49 VAL50 SER51 GLN52 MET53 VAL54 TYR55 LYS56 HIS57 ALA58 ILE59 SER60 THR61 VAL62 VAL63 PRO64 SER65 ARG66 PRO67 VAL68 SER69 HIS70
Unit 3 LYS3 GLY4 GLN5 SER6 LEU7 GLN8 ASP9 PRO10 PHE11 LEU12 ASN13 ALA14 LEU15 ARG16 ARG17 GLU18 ARG19 VAL20 PRO21 VAL22 SER23 ILE24 TYR25 LEU26 VAL27 ASN28 GLY29 ILE30 LYS31 LEU32 GLN33 GLY34 GLN35 ILE36 GLU37 SER38 PHE39 ASP40 GLN41 PHE42 VAL43 ILE44 LEU45 LEU46 LYS47 ASN48 THR49 VAL50 SER51 GLN52 MET53 VAL54 TYR55 LYS56 HIS57 ALA58 ILE59 SER60 THR61 VAL62 VAL63 PRO64 SER65 ARG66 PRO67 VAL68 SER69 HIS70
Unit 4 ALA2 LYS3 GLY4 GLN5 SER6 LEU7 GLN8 ASP9 PRO10 PHE11 LEU12 ASN13 ALA14 LEU15 ARG16 ARG17 GLU18 ARG19 VAL20 PRO21 VAL22 SER23 ILE24 TYR25 LEU26 VAL27 ASN28 GLY29 ILE30 LYS31 LEU32 GLN33 GLY34 GLN35 ILE36 GLU37 SER38 PHE39 ASP40 GLN41 PHE42 VAL43 ILE44 LEU45 LEU46 LYS47 ASN48 THR49 VAL50 SER51 GLN52 MET53 VAL54 TYR55 LYS56 HIS57 ALA58 ILE59 SER60 THR61 VAL62 VAL63 PRO64 SER65 ARG66 PRO67 VAL68 SER69 HIS70 HIS71 SER72
Unit 5 GLN5 SER6 LEU7 GLN8 ASP9 PRO10 PHE11 LEU12 ASN13 ALA14 LEU15 ARG16 ARG17 GLU18 ARG19 VAL20 PRO21 VAL22 SER23 ILE24 TYR25 LEU26 VAL27 ASN28 GLY29 ILE30 LYS31 LEU32 GLN33 GLY34 GLN35 ILE36 GLU37 SER38 PHE39 ASP40 GLN41 PHE42 VAL43 ILE44 LEU45 LEU46 LYS47 ASN48 THR49 VAL50 SER51 GLN52 MET53 VAL54 TYR55 LYS56 HIS57 ALA58 ILE59 SER60 THR61 VAL62 VAL63 PRO64 SER65 ARG66 PRO67 VAL68 SER69 HIS70 HIS71
Unit 6 ALA2 LYS3 GLY4 GLN5 SER6 LEU7 GLN8 ASP9 PRO10 PHE11 LEU12 ASN13 ALA14 LEU15 ARG16 ARG17 GLU18 ARG19 VAL20 PRO21 VAL22 SER23 ILE24 TYR25 LEU26 VAL27 ASN28 GLY29 ILE30 LYS31 LEU32 GLN33 GLY34 GLN35 ILE36 GLU37 SER38 PHE39 ASP40 GLN41 PHE42 VAL43 ILE44 LEU45 LEU46 LYS47 ASN48 THR49 VAL50 SER51 GLN52 MET53 VAL54 TYR55 LYS56 HIS57 ALA58 ILE59 SER60 THR61 VAL62 VAL63 PRO64 SER65 ARG66 PRO67 VAL68 SER69 HIS70 HIS71
Nucleic acids
Unit 7 A6 U7 G8 U9 A10 G11 A12 C13 C14 C15 G16 U17 C18 C19 C22 U23 U24 C25 G26 C27 C28 U29 G30 C31 G32 U33 C34 A35 C36 G37 G38 G39 U40 C41 C42 U43 G44 G45 U46 U47 A48 G49 A50 C51 G52 C53 A54 G55 G56 C57 G58 U59 U60 U61 U62 C63 U64 G65
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany