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Sequence, Chains, Asymmetric and Biological Units

Title TERNARY COMPLEX AMONG TWO HUMAN DERIVED SINGLE CHAIN ANTIBODY FRAGMENTS AND CN2 TOXIN FROM SCORPION CENTRUROIDES NOXIUS.
Keywords TOXIN-IMMUNE SYSTEM COMPLEX, HUMAN SCFV, SCORPION VENOM NEUTRALIZATION, DIRECTED EVOLUTION, CN2 TOXIN.
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4V1D     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SINGLE CHAIN ANTIBODY FRAGMENT LR, HEAVY CHAIN  A 117 883 0
2  Protein   SINGLE CHAIN ANTIBODY FRAGMENT LR, LIGHT CHAIN  B 109 836 0
3  Protein   BETA-MAMMAL TOXIN CN2  C 66 524 0
4  Protein   SINGLE CHAIN ANTIBODY FRAGMENT RU1, HEAVY CHAIN  D 124 953 0
5  Protein   SINGLE CHAIN ANTIBODY FRAGMENT RU1, LIGHT CHAIN  E 112 822 0
6 Water     5 0 6
total       533 4018 6

Proteins
Unit 1 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 THR23 GLY24 SER25 GLY26 PHE27 THR28 PHE29 ASP30 ASN31 TYR32 ALA33 MET34 HIS35 TRP36 LEU37 ARG38 GLN39 VAL40 PRO41 GLY42 GLU43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 GLY50 ILE51 SER52 ARG53 SER54 SER55 GLY56 ASP57 ILE58 ASP59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASP74 ALA75 LYS76 LYS77 THR78 LEU79 SER80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 ARG87 ALA88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 GLY99 GLY100 PHE101 GLY102 SER103 PHE104 ASP105 THR106 TRP107 GLY108 GLN109 GLY110 THR111 MET112 VAL113 THR114 VAL115 SER116 SER117
Unit 2 SER132 GLU133 ILE134 VAL135 LEU136 THR137 GLN138 SER139 PRO140 ALA141 THR142 LEU143 SER144 VAL145 SER146 PRO147 GLY148 GLU149 ARG150 ALA151 THR152 LEU153 SER154 CYS155 ARG156 ALA157 SER158 GLN159 SER160 VAL161 ARG162 SER163 TYR164 LEU165 ALA166 TRP167 TYR168 GLN169 GLN170 LYS171 PRO172 GLY173 GLN174 ALA175 PRO176 ARG177 LEU178 LEU179 PHE180 SER181 ASP182 ALA183 SER184 ASN185 ARG186 ALA187 THR188 GLY189 ILE190 PRO191 ALA192 ARG193 PHE194 THR195 GLY196 SER197 GLY198 SER199 GLY200 THR201 ASP202 PHE203 THR204 LEU205 THR206 ILE207 SER208 SER209 LEU210 GLU211 PRO212 GLU213 ASP214 PHE215 ALA216 ILE217 TYR218 TYR219 CYS220 GLN221 GLN222 TYR223 ARG224 TYR225 SER226 PRO227 ARG228 THR229 PHE230 GLY231 GLN232 GLY233 THR234 LYS235 VAL236 GLU237 ILE238 LYS239 ARG240
Unit 3 LYS1 GLU2 GLY3 TYR4 LEU5 VAL6 ASP7 LYS8 ASN9 THR10 GLY11 CYS12 LYS13 TYR14 GLU15 CYS16 LEU17 LYS18 LEU19 GLY20 ASP21 ASN22 ASP23 TYR24 CYS25 LEU26 ARG27 GLU28 CYS29 LYS30 GLN31 GLN32 TYR33 GLY34 LYS35 GLY36 ALA37 GLY38 GLY39 TYR40 CYS41 TYR42 ALA43 PHE44 ALA45 CYS46 TRP47 CYS48 THR49 HIS50 LEU51 TYR52 GLU53 GLN54 ALA55 ILE56 VAL57 TRP58 PRO59 LEU60 PRO61 ASN62 LYS63 ARG64 CYS65 SER66
Unit 4 GLN1 VAL2 ASN3 LEU4 ARG5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 SER28 PHE29 GLY30 SER31 TYR32 GLY33 MET34 HIS35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 ALA49 VAL50 ILE51 SER52 TYR53 GLY54 GLY55 GLY56 ASN57 LYS58 TYR59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASN74 SER75 LYS76 ASN77 THR78 LEU79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 ARG87 ALA88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 LYS98 ASP99 ALA100 ARG101 ASP102 CYS103 LEU104 LEU105 CYS106 ALA107 ASP108 TRP109 HIS110 PHE111 ASP112 LEU113 TRP114 GLY115 ARG116 GLY117 THR118 LEU119 VAL120 THR121 VAL122 SER123 SER124
Unit 5 SER139 ASN140 PHE141 MET142 LEU143 THR144 GLN145 PRO146 HIS147 SER148 ALA149 SER150 GLY151 THR152 PRO153 GLY154 GLN155 ARG156 VAL157 THR158 ILE159 SER160 CYS161 SER162 GLY163 SER164 SER165 SER166 ASN167 ILE168 GLY169 SER170 ASN171 THR172 VAL173 ASN174 TRP175 TYR176 ARG177 HIS178 LEU179 PRO180 GLY181 SER182 ALA183 PRO184 GLU185 LEU186 LEU187 ILE188 GLY189 SER190 HIS191 ASN192 GLN193 ARG194 PRO195 SER196 GLY197 VAL198 PRO199 ASP200 ARG201 PHE202 SER203 ALA204 SER205 LYS206 SER207 ASP208 THR209 SER210 ALA211 SER212 LEU213 ALA214 ILE215 SER216 GLY217 LEU218 GLN219 SER220 GLU221 ASP222 GLU223 ALA224 ASP225 TYR226 TYR227 CYS228 ALA229 ALA230 TRP231 ASP232 ASP233 SER234 LEU235 ILE236 GLY237 TYR238 VAL239 PHE240 GLY241 THR242 GLY243 THR244 LYS245 LEU246 THR247 VAL248 LEU249 GLY250

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany