4UTA - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF DENGUE 2 VIRUS ENVELOPE GLYCOPROTEIN IN WITH THE FAB FRAGMENT OF THE BROADLY NEUTRALIZING HUMAN ANT C8
• Keywords: IMMUNE SYSTEM-VIRAL PROTEIN COMPLEX, VIRAL PROTEIN, MEMBRANE CLASS 2 FUSION PROTEIN, DENGUE VIRUS, BROADLY NEUTRALIZING
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4UTA	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ENVELOPE GLYCOPROTEIN E	A	373	2898	0
2	Protein	ENVELOPE GLYCOPROTEIN E	B	386	3009	0
3	Protein		H	221	1656	0
4	Protein		I	211	1594	0
5	Protein		L	215	1672	0
6	Protein		M	213	1662	0
7	Ligand		C	4	0	49
8	Ligand		D	6	0	71
9	Water			65	0	66
total				1694	12491	186

Proteins

Unit 1	MET 1 ARG 2 CYS 3 ILE 4 GLY 5 ILE 6 SER 7 ASN 8 ARG 9 ASP 10 PHE 11 VAL 12 GLU 13 GLY 14 VAL 15 SER 16 GLY 17 GLY 18 SER 19 TRP 20 VAL 21 ASP 22 ILE 23 VAL 24 LEU 25 GLU 26 HIS 27 GLY 28 SER 29 CYS 30 VAL 31 THR 32 THR 33 MET 34 ALA 35 LYS 36 ASN 37 LYS 38 PRO 39 THR 40 LEU 41 ASP 42 PHE 43 GLU 44 LEU 45 ILE 46 LYS 47 THR 48 GLU 49 ALA 50 LYS 51 GLN 52 PRO 53 ALA 54 THR 55 LEU 56 ARG 57 LYS 58 TYR 59 CYS 60 ILE 61 GLU 62 ALA 63 LYS 64 LEU 65 THR 66 ASN 67 THR 68 THR 69 THR 70 GLU 71 SER 72 ARG 73 CYS 74 PRO 75 THR 76 GLN 77 GLY 78 GLU 79 PRO 80 SER 81 LEU 82 ASN 83 GLU 84 GLU 85 GLN 86 ASP 87 LYS 88 ARG 89 PHE 90 ILE 91 CYS 92 LYS 93 HIS 94 SER 95 MET 96 VAL 97 ASP 98 ARG 99 GLY 100 TRP 101 GLY 102 ASN 103 GLY 104 CYS 105 GLY 106 LEU 107 PHE 108 GLY 109 LYS 110 GLY 111 GLY 112 ILE 113 VAL 114 THR 115 CYS 116 ALA 117 LYS 118 PHE 119 THR 120 CYS 121 LYS 122 LYS 123 ASN 124 MET 125 GLU 126 GLY 127 LYS 128 ILE 129 VAL 130 GLN 131 PRO 132 GLU 133 ASN 134 LEU 135 GLU 136 TYR 137 THR 138 ILE 139 VAL 140 ILE 141 THR 142 PRO 143 HIS 144 SER 145 GLY 146 GLU 147 GLU 148 HIS 149 LYS 157 HIS 158 GLY 159 LYS 160 GLU 161 ILE 162 LYS 163 ILE 164 THR 165 PRO 166 GLN 167 SER 168 SER 169 THR 170 THR 171 GLU 172 ALA 173 GLU 174 LEU 175 THR 176 GLY 177 TYR 178 GLY 179 THR 180 VAL 181 THR 182 MET 183 GLU 184 CYS 185 SER 186 PRO 187 ARG 188 THR 189 GLY 190 LEU 191 ASP 192 PHE 193 ASN 194 GLU 195 MET 196 VAL 197 LEU 198 LEU 199 GLN 200 MET 201 GLU 202 ASP 203 LYS 204 ALA 205 TRP 206 LEU 207 VAL 208 HIS 209 ARG 210 GLN 211 TRP 212 PHE 213 LEU 214 ASP 215 LEU 216 PRO 217 LEU 218 PRO 219 TRP 220 LEU 221 PRO 222 GLY 223 ALA 224 ASP 225 THR 226 GLN 227 GLY 228 SER 229 ASN 230 TRP 231 ILE 232 GLN 233 LYS 234 GLU 235 THR 236 LEU 237 VAL 238 THR 239 PHE 240 LYS 241 ASN 242 PRO 243 HIS 244 ALA 245 LYS 246 LYS 247 GLN 248 ASP 249 VAL 250 VAL 251 VAL 252 LEU 253 GLY 254 SER 255 GLN 256 GLU 257 GLY 258 ALA 259 MET 260 HIS 261 THR 262 ALA 263 LEU 264 THR 265 GLY 266 ALA 267 THR 268 GLU 269 ILE 270 GLN 271 MET 272 SER 273 SER 274 GLY 275 ASN 276 LEU 277 LEU 278 PHE 279 THR 280 GLY 281 HIS 282 LEU 283 LYS 284 CYS 285 ARG 286 LEU 287 ARG 288 MET 289 ASP 290 LYS 291 LEU 292 GLN 293 LEU 294 LYS 295 GLY 296 MET 297 SER 298 TYR 299 SER 300 MET 301 CYS 302 THR 303 GLY 304 LYS 305 PHE 306 LYS 307 ILE 308 VAL 309 LYS 310 GLU 311 ILE 312 ALA 313 GLU 314 THR 315 GLN 316 HIS 317 GLY 318 THR 319 ILE 320 VAL 321 ILE 322 ARG 323 VAL 324 GLN 325 GLY 330 SER 331 PRO 332 CYS 333 LYS 334 ILE 335 PRO 336 PHE 337 GLU 338 ILE 339 THR 340 ASP 341 VAL 347 LEU 348 GLY 349 ARG 350 LEU 351 ILE 352 THR 353 VAL 354 ASN 355 PRO 356 ILE 357 VAL 358 THR 359 GLU 360 LYS 361 ASP 362 SER 363 PRO 364 VAL 365 ASN 366 ILE 367 GLU 368 ALA 369 GLU 370 PRO 371 PRO 372 PHE 373 GLY 374 ASP 375 SER 376 TYR 377 ILE 378 ILE 379 VAL 380 LEU 387 LYS 388 LEU 389 ASN 390 TRP 391 LEU 392 ARG 393 PRO 394 LEU 395
Unit 2	MET 1 ARG 2 CYS 3 ILE 4 GLY 5 ILE 6 SER 7 ASN 8 ARG 9 ASP 10 PHE 11 VAL 12 GLU 13 GLY 14 VAL 15 SER 16 GLY 17 GLY 18 SER 19 TRP 20 VAL 21 ASP 22 ILE 23 VAL 24 LEU 25 GLU 26 HIS 27 GLY 28 SER 29 CYS 30 VAL 31 THR 32 THR 33 MET 34 ALA 35 LYS 36 ASN 37 LYS 38 PRO 39 THR 40 LEU 41 ASP 42 PHE 43 GLU 44 LEU 45 ILE 46 LYS 47 THR 48 GLU 49 ALA 50 LYS 51 GLN 52 PRO 53 ALA 54 THR 55 LEU 56 ARG 57 LYS 58 TYR 59 CYS 60 ILE 61 GLU 62 ALA 63 LYS 64 LEU 65 THR 66 ASN 67 THR 68 THR 69 THR 70 GLU 71 SER 72 ARG 73 CYS 74 PRO 75 THR 76 GLN 77 GLY 78 GLU 79 PRO 80 SER 81 LEU 82 ASN 83 GLU 84 GLU 85 GLN 86 ASP 87 LYS 88 ARG 89 PHE 90 ILE 91 CYS 92 LYS 93 HIS 94 SER 95 MET 96 VAL 97 ASP 98 ARG 99 GLY 100 TRP 101 GLY 102 ASN 103 GLY 104 CYS 105 GLY 106 LEU 107 PHE 108 GLY 109 LYS 110 GLY 111 GLY 112 ILE 113 VAL 114 THR 115 CYS 116 ALA 117 LYS 118 PHE 119 THR 120 CYS 121 LYS 122 LYS 123 ASN 124 MET 125 GLU 126 GLY 127 LYS 128 ILE 129 VAL 130 GLN 131 PRO 132 GLU 133 ASN 134 LEU 135 GLU 136 TYR 137 THR 138 ILE 139 VAL 140 ILE 141 THR 142 PRO 143 HIS 144 SER 145 GLY 146 GLU 147 GLU 148 HIS 149 HIS 158 GLY 159 LYS 160 GLU 161 ILE 162 LYS 163 ILE 164 THR 165 PRO 166 GLN 167 SER 168 SER 169 THR 170 THR 171 GLU 172 ALA 173 GLU 174 LEU 175 THR 176 GLY 177 TYR 178 GLY 179 THR 180 VAL 181 THR 182 MET 183 GLU 184 CYS 185 SER 186 PRO 187 ARG 188 THR 189 GLY 190 LEU 191 ASP 192 PHE 193 ASN 194 GLU 195 MET 196 VAL 197 LEU 198 LEU 199 GLN 200 MET 201 GLU 202 ASP 203 LYS 204 ALA 205 TRP 206 LEU 207 VAL 208 HIS 209 ARG 210 GLN 211 TRP 212 PHE 213 LEU 214 ASP 215 LEU 216 PRO 217 LEU 218 PRO 219 TRP 220 LEU 221 PRO 222 GLY 223 ALA 224 ASP 225 THR 226 GLN 227 GLY 228 SER 229 ASN 230 TRP 231 ILE 232 GLN 233 LYS 234 GLU 235 THR 236 LEU 237 VAL 238 THR 239 PHE 240 LYS 241 ASN 242 PRO 243 HIS 244 ALA 245 LYS 246 LYS 247 GLN 248 ASP 249 VAL 250 VAL 251 VAL 252 LEU 253 GLY 254 SER 255 GLN 256 GLU 257 GLY 258 ALA 259 MET 260 HIS 261 THR 262 ALA 263 LEU 264 THR 265 GLY 266 ALA 267 THR 268 GLU 269 ILE 270 GLN 271 MET 272 SER 273 SER 274 GLY 275 ASN 276 LEU 277 LEU 278 PHE 279 THR 280 GLY 281 HIS 282 LEU 283 LYS 284 CYS 285 ARG 286 LEU 287 ARG 288 MET 289 ASP 290 LYS 291 LEU 292 GLN 293 LEU 294 LYS 295 GLY 296 MET 297 SER 298 TYR 299 SER 300 MET 301 CYS 302 THR 303 GLY 304 LYS 305 PHE 306 LYS 307 ILE 308 VAL 309 LYS 310 GLU 311 ILE 312 ALA 313 GLU 314 THR 315 GLN 316 HIS 317 GLY 318 THR 319 ILE 320 VAL 321 ILE 322 ARG 323 VAL 324 GLN 325 TYR 326 GLU 327 GLY 328 ASP 329 GLY 330 SER 331 PRO 332 CYS 333 LYS 334 ILE 335 PRO 336 PHE 337 GLU 338 ILE 339 LYS 344 ARG 345 HIS 346 VAL 347 LEU 348 GLY 349 ARG 350 LEU 351 ILE 352 THR 353 VAL 354 ASN 355 PRO 356 ILE 357 VAL 358 THR 359 GLU 360 LYS 361 ASP 362 SER 363 PRO 364 VAL 365 ASN 366 ILE 367 GLU 368 ALA 369 GLU 370 PRO 371 PRO 372 PHE 373 GLY 374 ASP 375 SER 376 TYR 377 ILE 378 ILE 379 VAL 380 GLY 381 VAL 382 GLU 383 PRO 384 GLY 385 GLN 386 LEU 387 LYS 388 LEU 389 ASN 390 TRP 391 LEU 392 ARG 393 PRO 394 LEU 395 GLU 396 SER 397 ARG 398
Unit 3	VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 SER 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 THR 31 TYR 32 SER 33 MET 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TYR 47 VAL 48 SER 49 ALA 50 ILE 51 THR 52 GLY 53 GLU 54 GLY 55 ASP 56 SER 57 ALA 58 PHE 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 PHE 81 GLU 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 PRO 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 VAL 97 GLY 98 GLY 99 TYR 100 SER 101 ASN 102 PHE 103 TYR 104 TYR 105 TYR 106 TYR 107 THR 108 MET 109 ASP 110 VAL 111 TRP 112 GLY 113 GLN 114 GLY 115 THR 116 THR 117 VAL 118 THR 119 VAL 120 SER 121 SER 122 ALA 123 SER 124 THR 125 LYS 126 GLY 127 PRO 128 SER 129 VAL 130 PHE 131 PRO 132 LEU 133 ALA 134 PRO 135 SER 136 SER 137 LYS 138 SER 139 THR 140 SER 141 GLY 142 GLY 143 THR 144 ALA 145 ALA 146 LEU 147 GLY 148 CYS 149 LEU 150 VAL 151 LYS 152 ASP 153 TYR 154 PHE 155 PRO 156 GLU 157 PRO 158 VAL 159 THR 160 VAL 161 SER 162 TRP 163 ASN 164 SER 165 GLY 166 ALA 167 LEU 168 THR 169 SER 170 GLY 171 VAL 172 HIS 173 THR 174 PHE 175 PRO 176 ALA 177 VAL 178 LEU 179 GLN 180 SER 181 SER 182 GLY 183 LEU 184 TYR 185 SER 186 LEU 187 SER 188 SER 189 VAL 190 VAL 191 THR 192 VAL 193 PRO 194 SER 195 SER 196 SER 197 LEU 198 GLY 199 THR 200 GLN 201 THR 202 TYR 203 ILE 204 CYS 205 ASN 206 VAL 207 ASN 208 HIS 209 LYS 210 PRO 211 SER 212 ASN 213 THR 214 LYS 215 VAL 216 ASP 217 LYS 218 ARG 219 VAL 220 GLU 221 PRO 222
Unit 4	VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 SER 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 THR 31 TYR 32 SER 33 MET 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TYR 47 VAL 48 SER 49 ALA 50 ILE 51 THR 52 GLY 53 GLU 54 GLY 55 ASP 56 SER 57 ALA 58 PHE 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 PHE 81 GLU 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 PRO 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 VAL 97 GLY 98 GLY 99 TYR 100 SER 101 ASN 102 PHE 103 TYR 104 TYR 105 TYR 106 TYR 107 THR 108 MET 109 ASP 110 VAL 111 TRP 112 GLY 113 GLN 114 GLY 115 THR 116 THR 117 VAL 118 THR 119 VAL 120 SER 121 SER 122 ALA 123 SER 124 THR 125 LYS 126 GLY 127 PRO 128 SER 129 VAL 130 PHE 131 PRO 132 LEU 133 ALA 134 THR 144 ALA 145 ALA 146 LEU 147 GLY 148 CYS 149 LEU 150 VAL 151 LYS 152 ASP 153 TYR 154 PHE 155 PRO 156 GLU 157 PRO 158 VAL 159 THR 160 VAL 161 SER 162 TRP 163 ASN 164 SER 165 GLY 166 ALA 167 LEU 168 THR 169 SER 170 GLY 171 VAL 172 HIS 173 THR 174 PHE 175 PRO 176 ALA 177 VAL 178 LEU 179 GLN 180 SER 181 SER 182 GLY 183 LEU 184 TYR 185 SER 186 LEU 187 SER 188 SER 189 VAL 190 VAL 191 THR 192 VAL 193 PRO 194 SER 195 SER 196 SER 197 LEU 198 GLY 199 THR 200 GLN 201 THR 202 TYR 203 ILE 204 CYS 205 ASN 206 VAL 207 ASN 208 HIS 209 LYS 210 PRO 211 SER 212 ASN 213 THR 214 LYS 215 VAL 216 ASP 217 LYS 218 ARG 219 VAL 220 GLU 221
Unit 5	SER 0 GLU 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 THR 10 LEU 11 SER 12 LEU 13 SER 14 PRO 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 LEU 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 ILE 29 SER 30 THR 31 PHE 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 HIS 38 LYS 39 PRO 40 GLY 41 GLN 42 ALA 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 THR 53 ARG 54 ALA 55 THR 56 GLY 57 VAL 58 PRO 59 ALA 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 ARG 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 THR 77 LEU 78 GLU 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 ARG 91 TYR 92 ASN 93 TRP 94 PRO 95 PRO 96 TYR 97 THR 98 PHE 99 GLY 100 GLN 101 GLY 102 THR 103 LYS 104 VAL 105 GLU 106 ILE 107 LYS 108 ARG 109 THR 110 VAL 111 ALA 112 ALA 113 PRO 114 SER 115 VAL 116 PHE 117 ILE 118 PHE 119 PRO 120 PRO 121 SER 122 ASP 123 GLU 124 GLN 125 LEU 126 LYS 127 SER 128 GLY 129 THR 130 ALA 131 SER 132 VAL 133 VAL 134 CYS 135 LEU 136 LEU 137 ASN 138 ASN 139 PHE 140 TYR 141 PRO 142 ARG 143 GLU 144 ALA 145 LYS 146 VAL 147 GLN 148 TRP 149 LYS 150 VAL 151 ASP 152 ASN 153 ALA 154 LEU 155 GLN 156 SER 157 GLY 158 ASN 159 SER 160 GLN 161 GLU 162 SER 163 VAL 164 THR 165 GLU 166 GLN 167 ASP 168 SER 169 LYS 170 ASP 171 SER 172 THR 173 TYR 174 SER 175 LEU 176 SER 177 SER 178 THR 179 LEU 180 THR 181 LEU 182 SER 183 LYS 184 ALA 185 ASP 186 TYR 187 GLU 188 LYS 189 HIS 190 LYS 191 VAL 192 TYR 193 ALA 194 CYS 195 GLU 196 VAL 197 THR 198 HIS 199 GLN 200 GLY 201 LEU 202 SER 203 SER 204 PRO 205 VAL 206 THR 207 LYS 208 SER 209 PHE 210 ASN 211 ARG 212 GLY 213 GLU 214
Unit 6	SER 0 GLU 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 THR 10 LEU 11 SER 12 LEU 13 SER 14 PRO 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 LEU 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 ILE 29 SER 30 THR 31 PHE 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 HIS 38 LYS 39 PRO 40 GLY 41 GLN 42 ALA 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 THR 53 ARG 54 ALA 55 THR 56 GLY 57 VAL 58 PRO 59 ALA 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 ARG 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 THR 77 LEU 78 GLU 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 ARG 91 TYR 92 ASN 93 TRP 94 PRO 95 PRO 96 TYR 97 THR 98 PHE 99 GLY 100 GLN 101 GLY 102 THR 103 LYS 104 VAL 105 GLU 106 ILE 107 LYS 108 ARG 109 THR 110 VAL 111 ALA 112 ALA 113 PRO 114 SER 115 VAL 116 PHE 117 ILE 118 PHE 119 PRO 120 PRO 121 SER 122 ASP 123 GLU 124 GLN 125 LEU 126 LYS 127 SER 128 GLY 129 THR 130 ALA 131 SER 132 VAL 133 VAL 134 CYS 135 LEU 136 LEU 137 ASN 138 ASN 139 PHE 140 TYR 141 PRO 142 ARG 143 GLU 144 ALA 145 LYS 146 VAL 147 GLN 148 TRP 149 LYS 150 VAL 151 ASP 152 ASN 153 ALA 154 LEU 155 GLN 156 ASN 159 SER 160 GLN 161 GLU 162 SER 163 VAL 164 THR 165 GLU 166 GLN 167 ASP 168 SER 169 LYS 170 ASP 171 SER 172 THR 173 TYR 174 SER 175 LEU 176 SER 177 SER 178 THR 179 LEU 180 THR 181 LEU 182 SER 183 LYS 184 ALA 185 ASP 186 TYR 187 GLU 188 LYS 189 HIS 190 LYS 191 VAL 192 TYR 193 ALA 194 CYS 195 GLU 196 VAL 197 THR 198 HIS 199 GLN 200 GLY 201 LEU 202 SER 203 SER 204 PRO 205 VAL 206 THR 207 LYS 208 SER 209 PHE 210 ASN 211 ARG 212 GLY 213 GLU 214

Ligands

Unit 7	NAG 1 NAG 2 BMA 3 FUC 4
Unit 8	NAG 1 NAG 2 BMA 3 MAN 4 MAN 5 FUC 6