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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE ECTODOMAIN OF LGR5 IN COMPLEX WITH R-SPONDI (FU1FU2)
Keywords SIGNALING PROTEIN, WNT, LGR, RSPO
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4UFR     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED 5  A 459 3602 0
2  Protein   R-SPONDIN-2  B 102 781 0
3  Protein   LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED 5  C 458 3588 0
4  Protein   R-SPONDIN-2  D 102 751 0
5  Ligand   LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED 5  A 4 0 17
6  Ligand   R-SPONDIN-2  B 1 0 1
7  Ligand   LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED 5  C 2 0 15
8  Ligand   R-SPONDIN-2  D 1 0 1
9 Water     149 0 150
total       1278 8722 184
Proteins
Unit 1 ARG32 GLY33 CYS34 PRO35 THR36 HIS37 CYS38 HIS39 CYS40 GLU41 PRO42 ASP43 GLY44 ARG45 MET46 LEU47 LEU48 ARG49 VAL50 ASP51 CYS52 SER53 ASP54 LEU55 GLY56 LEU57 SER58 GLU59 LEU60 PRO61 SER62 ASN63 LEU64 SER65 VAL66 PHE67 THR68 SER69 TYR70 LEU71 ASP72 LEU73 SER74 MET75 ASN76 ASN77 ILE78 SER79 GLN80 LEU81 LEU82 PRO83 ASN84 PRO85 LEU86 PRO87 SER88 LEU89 ARG90 PHE91 LEU92 GLU93 GLU94 LEU95 ARG96 LEU97 ALA98 GLY99 ASN100 ALA101 LEU102 THR103 TYR104 ILE105 PRO106 LYS107 GLY108 ALA109 PHE110 THR111 GLY112 LEU113 TYR114 SER115 LEU116 LYS117 VAL118 LEU119 MET120 LEU121 GLN122 ASN123 ASN124 GLN125 LEU126 ARG127 HIS128 VAL129 PRO130 THR131 GLU132 ALA133 LEU134 GLN135 ASN136 LEU137 ARG138 SER139 LEU140 GLN141 SER142 LEU143 ARG144 LEU145 ASP146 ALA147 ASN148 HIS149 ILE150 SER151 TYR152 VAL153 PRO154 PRO155 SER156 CYS157 PHE158 SER159 GLY160 LEU161 HIS162 SER163 LEU164 ARG165 HIS166 LEU167 TRP168 LEU169 ASP170 ASP171 ASN172 ALA173 LEU174 THR175 GLU176 ILE177 PRO178 VAL179 GLN180 ALA181 PHE182 ARG183 SER184 LEU185 SER186 ALA187 LEU188 GLN189 ALA190 MET191 THR192 LEU193 ALA194 LEU195 ASN196 LYS197 ILE198 HIS199 HIS200 ILE201 PRO202 ASP203 TYR204 ALA205 PHE206 GLY207 ASN208 LEU209 SER210 SER211 LEU212 VAL213 VAL214 LEU215 HIS216 LEU217 HIS218 ASN219 ASN220 ARG221 ILE222 HIS223 SER224 LEU225 GLY226 LYS227 LYS228 CYS229 PHE230 ASP231 GLY232 LEU233 HIS234 SER235 LEU236 GLU237 THR238 LEU239 ASP240 LEU241 ASN242 TYR243 ASN244 ASN245 LEU246 ASP247 GLU248 PHE249 PRO250 THR251 ALA252 ILE253 ARG254 THR255 LEU256 SER257 ASN258 LEU259 LYS260 GLU261 LEU262 GLY263 PHE264 HIS265 SER266 ASN267 ASN268 ILE269 ARG270 SER271 ILE272 PRO273 GLU274 LYS275 ALA276 PHE277 VAL278 GLY279 ASN280 PRO281 SER282 LEU283 ILE284 THR285 ILE286 HIS287 PHE288 TYR289 ASP290 ASN291 PRO292 ILE293 GLN294 PHE295 VAL296 GLY297 ARG298 SER299 ALA300 PHE301 GLN302 HIS303 LEU304 PRO305 GLU306 LEU307 ARG308 THR309 LEU310 THR311 LEU312 ASN313 GLY314 ALA315 SER316 GLN317 ILE318 THR319 GLU320 PHE321 PRO322 ASP323 LEU324 THR325 GLY326 THR327 ALA328 ASN329 LEU330 GLU331 SER332 LEU333 THR334 LEU335 THR336 GLY337 ALA338 GLN339 ILE340 SER341 SER342 LEU343 PRO344 GLN345 THR346 VAL347 CYS348 ASN349 GLN350 LEU351 PRO352 ASN353 LEU354 GLN355 VAL356 LEU357 ASP358 LEU359 SER360 TYR361 ASN362 LEU363 LEU364 GLU365 ASP366 LEU367 PRO368 SER369 PHE370 SER371 VAL372 CYS373 GLN374 LYS375 LEU376 GLN377 LYS378 ILE379 ASP380 LEU381 ARG382 HIS383 ASN384 GLU385 ILE386 TYR387 GLU388 ILE389 LYS390 VAL391 ASP392 THR393 PHE394 GLN395 GLN396 LEU397 LEU398 SER399 LEU400 ARG401 SER402 LEU403 ASN404 LEU405 ALA406 TRP407 ASN408 LYS409 ILE410 ALA411 ILE412 ILE413 HIS414 PRO415 ASN416 ALA417 PHE418 SER419 THR420 LEU421 PRO422 SER423 LEU424 ILE425 LYS426 LEU427 ASP428 LEU429 SER430 SER431 ASN432 LEU433 LEU434 SER435 SER436 PHE437 PRO438 ILE439 THR440 GLY441 LEU442 HIS443 GLY444 LEU445 THR446 HIS447 LEU448 LYS449 LEU450 THR451 GLY452 ASN453 HIS454 ALA455 LEU456 GLN457 SER458 LEU459 ILE460 SER461 SER462 GLU463 ASN464 PHE465 PRO466 GLU467 LEU468 LYS469 VAL470 ILE471 GLU472 MET473 PRO474 TYR475 ALA476 TYR477 GLN478 CYS479 CYS480 ALA481 PHE482 GLY483 VAL484 CYS485 VAL539 GLN540 CYS541 SER542 PRO543
Unit 2 CYS40 LYS41 GLY42 CYS43 LEU44 SER45 CYS46 SER47 LYS48 ASP49 ASN50 GLY51 CYS52 SER53 ARG54 CYS55 GLN56 GLN57 LYS58 LEU59 PHE60 PHE61 PHE62 LEU63 ARG64 ARG65 GLU66 GLY67 MET68 ARG69 GLN70 TYR71 GLY72 GLU73 CYS74 LEU75 HIS76 SER77 CYS78 PRO79 SER80 GLY81 TYR82 TYR83 GLY84 HIS85 ARG86 ALA87 PRO88 ASP89 MET90 ASN91 ARG92 CYS93 ALA94 ARG95 CYS96 ARG97 ILE98 GLU99 ASN100 CYS101 ASP102 SER103 CYS104 PHE105 SER106 LYS107 ASP108 PHE109 CYS110 THR111 LYS112 CYS113 LYS114 VAL115 GLY116 PHE117 TYR118 LEU119 HIS120 ARG121 GLY122 ARG123 CYS124 PHE125 ASP126 GLU127 CYS128 PRO129 ASP130 GLY131 PHE132 ALA133 PRO134 LEU135 ASP136 GLU137 THR138 MET139 GLU140 CYS141
Unit 3 GLY33 CYS34 PRO35 THR36 HIS37 CYS38 HIS39 CYS40 GLU41 PRO42 ASP43 GLY44 ARG45 MET46 LEU47 LEU48 ARG49 VAL50 ASP51 CYS52 SER53 ASP54 LEU55 GLY56 LEU57 SER58 GLU59 LEU60 PRO61 SER62 ASN63 LEU64 SER65 VAL66 PHE67 THR68 SER69 TYR70 LEU71 ASP72 LEU73 SER74 MET75 ASN76 ASN77 ILE78 SER79 GLN80 LEU81 LEU82 PRO83 ASN84 PRO85 LEU86 PRO87 SER88 LEU89 ARG90 PHE91 LEU92 GLU93 GLU94 LEU95 ARG96 LEU97 ALA98 GLY99 ASN100 ALA101 LEU102 THR103 TYR104 ILE105 PRO106 LYS107 GLY108 ALA109 PHE110 THR111 GLY112 LEU113 TYR114 SER115 LEU116 LYS117 VAL118 LEU119 MET120 LEU121 GLN122 ASN123 ASN124 GLN125 LEU126 ARG127 HIS128 VAL129 PRO130 THR131 GLU132 ALA133 LEU134 GLN135 ASN136 LEU137 ARG138 SER139 LEU140 GLN141 SER142 LEU143 ARG144 LEU145 ASP146 ALA147 ASN148 HIS149 ILE150 SER151 TYR152 VAL153 PRO154 PRO155 SER156 CYS157 PHE158 SER159 GLY160 LEU161 HIS162 SER163 LEU164 ARG165 HIS166 LEU167 TRP168 LEU169 ASP170 ASP171 ASN172 ALA173 LEU174 THR175 GLU176 ILE177 PRO178 VAL179 GLN180 ALA181 PHE182 ARG183 SER184 LEU185 SER186 ALA187 LEU188 GLN189 ALA190 MET191 THR192 LEU193 ALA194 LEU195 ASN196 LYS197 ILE198 HIS199 HIS200 ILE201 PRO202 ASP203 TYR204 ALA205 PHE206 GLY207 ASN208 LEU209 SER210 SER211 LEU212 VAL213 VAL214 LEU215 HIS216 LEU217 HIS218 ASN219 ASN220 ARG221 ILE222 HIS223 SER224 LEU225 GLY226 LYS227 LYS228 CYS229 PHE230 ASP231 GLY232 LEU233 HIS234 SER235 LEU236 GLU237 THR238 LEU239 ASP240 LEU241 ASN242 TYR243 ASN244 ASN245 LEU246 ASP247 GLU248 PHE249 PRO250 THR251 ALA252 ILE253 ARG254 THR255 LEU256 SER257 ASN258 LEU259 LYS260 GLU261 LEU262 GLY263 PHE264 HIS265 SER266 ASN267 ASN268 ILE269 ARG270 SER271 ILE272 PRO273 GLU274 LYS275 ALA276 PHE277 VAL278 GLY279 ASN280 PRO281 SER282 LEU283 ILE284 THR285 ILE286 HIS287 PHE288 TYR289 ASP290 ASN291 PRO292 ILE293 GLN294 PHE295 VAL296 GLY297 ARG298 SER299 ALA300 PHE301 GLN302 HIS303 LEU304 PRO305 GLU306 LEU307 ARG308 THR309 LEU310 THR311 LEU312 ASN313 GLY314 ALA315 SER316 GLN317 ILE318 THR319 GLU320 PHE321 PRO322 ASP323 LEU324 THR325 GLY326 THR327 ALA328 ASN329 LEU330 GLU331 SER332 LEU333 THR334 LEU335 THR336 GLY337 ALA338 GLN339 ILE340 SER341 SER342 LEU343 PRO344 GLN345 THR346 VAL347 CYS348 ASN349 GLN350 LEU351 PRO352 ASN353 LEU354 GLN355 VAL356 LEU357 ASP358 LEU359 SER360 TYR361 ASN362 LEU363 LEU364 GLU365 ASP366 LEU367 PRO368 SER369 PHE370 SER371 VAL372 CYS373 GLN374 LYS375 LEU376 GLN377 LYS378 ILE379 ASP380 LEU381 ARG382 HIS383 ASN384 GLU385 ILE386 TYR387 GLU388 ILE389 LYS390 VAL391 ASP392 THR393 PHE394 GLN395 GLN396 LEU397 LEU398 SER399 LEU400 ARG401 SER402 LEU403 ASN404 LEU405 ALA406 TRP407 ASN408 LYS409 ILE410 ALA411 ILE412 ILE413 HIS414 PRO415 ASN416 ALA417 PHE418 SER419 THR420 LEU421 PRO422 SER423 LEU424 ILE425 LYS426 LEU427 ASP428 LEU429 SER430 SER431 ASN432 LEU433 LEU434 SER435 SER436 PHE437 PRO438 ILE439 THR440 GLY441 LEU442 HIS443 GLY444 LEU445 THR446 HIS447 LEU448 LYS449 LEU450 THR451 GLY452 ASN453 HIS454 ALA455 LEU456 GLN457 SER458 LEU459 ILE460 SER461 SER462 GLU463 ASN464 PHE465 PRO466 GLU467 LEU468 LYS469 VAL470 ILE471 GLU472 MET473 PRO474 TYR475 ALA476 TYR477 GLN478 CYS479 CYS480 ALA481 PHE482 GLY483 VAL484 CYS485 VAL539 GLN540 CYS541 SER542 PRO543
Unit 4 CYS40 LYS41 GLY42 CYS43 LEU44 SER45 CYS46 SER47 LYS48 ASP49 ASN50 GLY51 CYS52 SER53 ARG54 CYS55 GLN56 GLN57 LYS58 LEU59 PHE60 PHE61 PHE62 LEU63 ARG64 ARG65 GLU66 GLY67 MET68 ARG69 GLN70 TYR71 GLY72 GLU73 CYS74 LEU75 HIS76 SER77 CYS78 PRO79 SER80 GLY81 TYR82 TYR83 GLY84 HIS85 ARG86 ALA87 PRO88 ASP89 MET90 ASN91 ARG92 CYS93 ALA94 ARG95 CYS96 ARG97 ILE98 GLU99 ASN100 CYS101 ASP102 SER103 CYS104 PHE105 SER106 LYS107 ASP108 PHE109 CYS110 THR111 LYS112 CYS113 LYS114 VAL115 GLY116 PHE117 TYR118 LEU119 HIS120 ARG121 GLY122 ARG123 CYS124 PHE125 ASP126 GLU127 CYS128 PRO129 ASP130 GLY131 PHE132 ALA133 PRO134 LEU135 ASP136 GLU137 THR138 MET139 GLU140 CYS141
Ligands
Unit 5 NAG1001 CL1545 CL1546 CL1547
Unit 6 CL1142
Unit 7 NAG1001 CL1545
Unit 8 CL1142
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany