4TZZ - Sequence, Chains, Asymmetric and Biological Units

• Title: CO-CRYSTALS OF THE TERNARY COMPLEX CONTAINING A T-BOX STEM I COGNATE TRNAGLY, AND B. SUBTILIS YBXF PROTEIN, TREATED BY R LITHIUM SULFATE AND INCREASING PEG3350 CONCENTRATION FROM 2 POST CRYSTALLIZATION
• Keywords: RNA, RIBOSWITCH, TRNA, T-BOX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4TZZ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE	A	81	508	16
2	RNA		B	75	1592	0
3	RNA		C	102	2194	0
4	Protein	RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE	D	81	508	16
5	RNA		E	75	1592	0
6	RNA		F	102	2197	0
7	Protein	RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE	G	81	508	16
8	RNA		H	75	1592	0
9	RNA		I	102	2197	0
10	Protein	RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE	J	81	508	16
11	RNA		K	75	1591	0
12	RNA		L	102	2194	0
13	Ligand	ENGINEERED TRNAGLY	B	2	0	2
14	Ligand	T-BOX STEM I RNA	C	4	0	4
15	Ligand	ENGINEERED TRNAGLY	E	7	0	7
16	Ligand	T-BOX STEM I RNA	F	4	0	4
17	Ligand	ENGINEERED TRNAGLY	H	5	0	5
18	Ligand	T-BOX STEM I RNA	I	5	0	5
19	Ligand	T-BOX STEM I RNA	L	2	0	2
total				1061	17181	93

Proteins

Unit 1	SER 2 TYR 3 ASP 4 LYS 5 VAL 6 SER 7 GLN 8 ALA 9 LYS 10 SER 11 ILE 12 ILE 13 ILE 14 GLY 15 THR 16 LYS 17 GLN 18 THR 19 VAL 20 LYS 21 ALA 22 LEU 23 LYS 24 ARG 25 GLY 26 SER 27 VAL 28 LYS 29 GLU 30 VAL 31 VAL 32 VAL 33 ALA 34 LYS 35 ASP 36 ALA 37 ASP 38 PRO 39 ILE 40 LEU 41 THR 42 SER 43 SER 44 VAL 45 VAL 46 SER 47 LEU 48 ALA 49 GLU 50 ASP 51 GLN 52 GLY 53 ILE 54 SER 55 VAL 56 SER 57 MSE 58 VAL 59 GLU 60 SER 61 MSE 62 LYS 63 LYS 64 LEU 65 GLY 66 LYS 67 ALA 68 CYS 69 GLY 70 ILE 71 GLU 72 VAL 73 GLY 74 ALA 75 ALA 76 ALA 77 VAL 78 ALA 79 ILE 80 ILE 81 LEU 82
Unit 4	SER 2 TYR 3 ASP 4 LYS 5 VAL 6 SER 7 GLN 8 ALA 9 LYS 10 SER 11 ILE 12 ILE 13 ILE 14 GLY 15 THR 16 LYS 17 GLN 18 THR 19 VAL 20 LYS 21 ALA 22 LEU 23 LYS 24 ARG 25 GLY 26 SER 27 VAL 28 LYS 29 GLU 30 VAL 31 VAL 32 VAL 33 ALA 34 LYS 35 ASP 36 ALA 37 ASP 38 PRO 39 ILE 40 LEU 41 THR 42 SER 43 SER 44 VAL 45 VAL 46 SER 47 LEU 48 ALA 49 GLU 50 ASP 51 GLN 52 GLY 53 ILE 54 SER 55 VAL 56 SER 57 MSE 58 VAL 59 GLU 60 SER 61 MSE 62 LYS 63 LYS 64 LEU 65 GLY 66 LYS 67 ALA 68 CYS 69 GLY 70 ILE 71 GLU 72 VAL 73 GLY 74 ALA 75 ALA 76 ALA 77 VAL 78 ALA 79 ILE 80 ILE 81 LEU 82
Unit 7	SER 2 TYR 3 ASP 4 LYS 5 VAL 6 SER 7 GLN 8 ALA 9 LYS 10 SER 11 ILE 12 ILE 13 ILE 14 GLY 15 THR 16 LYS 17 GLN 18 THR 19 VAL 20 LYS 21 ALA 22 LEU 23 LYS 24 ARG 25 GLY 26 SER 27 VAL 28 LYS 29 GLU 30 VAL 31 VAL 32 VAL 33 ALA 34 LYS 35 ASP 36 ALA 37 ASP 38 PRO 39 ILE 40 LEU 41 THR 42 SER 43 SER 44 VAL 45 VAL 46 SER 47 LEU 48 ALA 49 GLU 50 ASP 51 GLN 52 GLY 53 ILE 54 SER 55 VAL 56 SER 57 MSE 58 VAL 59 GLU 60 SER 61 MSE 62 LYS 63 LYS 64 LEU 65 GLY 66 LYS 67 ALA 68 CYS 69 GLY 70 ILE 71 GLU 72 VAL 73 GLY 74 ALA 75 ALA 76 ALA 77 VAL 78 ALA 79 ILE 80 ILE 81 LEU 82
Unit 10	SER 2 TYR 3 ASP 4 LYS 5 VAL 6 SER 7 GLN 8 ALA 9 LYS 10 SER 11 ILE 12 ILE 13 ILE 14 GLY 15 THR 16 LYS 17 GLN 18 THR 19 VAL 20 LYS 21 ALA 22 LEU 23 LYS 24 ARG 25 GLY 26 SER 27 VAL 28 LYS 29 GLU 30 VAL 31 VAL 32 VAL 33 ALA 34 LYS 35 ASP 36 ALA 37 ASP 38 PRO 39 ILE 40 LEU 41 THR 42 SER 43 SER 44 VAL 45 VAL 46 SER 47 LEU 48 ALA 49 GLU 50 ASP 51 GLN 52 GLY 53 ILE 54 SER 55 VAL 56 SER 57 MSE 58 VAL 59 GLU 60 SER 61 MSE 62 LYS 63 LYS 64 LEU 65 GLY 66 LYS 67 ALA 68 CYS 69 GLY 70 ILE 71 GLU 72 VAL 73 GLY 74 ALA 75 ALA 76 ALA 77 VAL 78 ALA 79 ILE 80 ILE 81 LEU 82

Nucleic acids

Unit 2	G 5 A 6 G 7 U 8 A 9 G 10 U 11 U 12 C 13 A 14 G 15 U 16 G 17 G 18 U 19 A 20 G 21 A 22 A 23 C 24 A 25 C 26 C 27 A 28 C 29 C 30 U 31 U 32 G 33 C 34 C 35 A 36 A 37 G 38 G 39 U 40 G 41 G 42 G 43 G 44 G 45 U 46 C 47 G 48 C 49 G 50 G 51 G 52 U 53 U 54 C 55 G 56 A 57 A 58 U 59 C 60 C 61 C 62 G 63 U 64 C 65 U 66 C 67 G 68 G 69 G 70 C 71 G 72 A 73 A 74 A 75 G 76 C 77 C 78 C 79
Unit 3	G 1 G 2 G 3 U 4 G 5 C 6 G 7 A 8 U 9 G 10 A 11 G 12 A 13 A 14 G 15 A 16 A 17 G 18 A 19 G 20 U 21 A 22 U 23 U 24 A 25 A 26 G 27 G 28 A 29 U 30 U 31 U 32 A 33 C 34 U 35 A 36 U 37 G 38 A 39 U 40 U 41 A 42 G 43 C 44 G 45 A 46 C 47 U 48 C 49 U 50 A 51 G 52 G 53 A 54 U 55 A 56 G 57 U 58 G 59 A 60 A 61 A 62 G 63 C 64 U 65 A 66 G 67 A 68 G 69 G 70 A 71 U 72 A 73 G 74 U 75 A 76 A 77 C 78 C 79 U 80 U 81 A 82 A 83 G 84 A 85 A 86 G 87 G 88 C 89 A 90 C 91 U 92 U 93 C 94 G 95 A 96 G 97 C 98 A 99 C 100 C 101 C 102
Unit 5	G 5 A 6 G 7 U 8 A 9 G 10 U 11 U 12 C 13 A 14 G 15 U 16 G 17 G 18 U 19 A 20 G 21 A 22 A 23 C 24 A 25 C 26 C 27 A 28 C 29 C 30 U 31 U 32 G 33 C 34 C 35 A 36 A 37 G 38 G 39 U 40 G 41 G 42 G 43 G 44 G 45 U 46 C 47 G 48 C 49 G 50 G 51 G 52 U 53 U 54 C 55 G 56 A 57 A 58 U 59 C 60 C 61 C 62 G 63 U 64 C 65 U 66 C 67 G 68 G 69 G 70 C 71 G 72 A 73 A 74 A 75 G 76 C 77 C 78 C 79
Unit 6	G 1 G 2 G 3 U 4 G 5 C 6 G 7 A 8 U 9 G 10 A 11 G 12 A 13 A 14 G 15 A 16 A 17 G 18 A 19 G 20 U 21 A 22 U 23 U 24 A 25 A 26 G 27 G 28 A 29 U 30 U 31 U 32 A 33 C 34 U 35 A 36 U 37 G 38 A 39 U 40 U 41 A 42 G 43 C 44 G 45 A 46 C 47 U 48 C 49 U 50 A 51 G 52 G 53 A 54 U 55 A 56 G 57 U 58 G 59 A 60 A 61 A 62 G 63 C 64 U 65 A 66 G 67 A 68 G 69 G 70 A 71 U 72 A 73 G 74 U 75 A 76 A 77 C 78 C 79 U 80 U 81 A 82 A 83 G 84 A 85 A 86 G 87 G 88 C 89 A 90 C 91 U 92 U 93 C 94 G 95 A 96 G 97 C 98 A 99 C 100 C 101 C 102
Unit 8	G 5 A 6 G 7 U 8 A 9 G 10 U 11 U 12 C 13 A 14 G 15 U 16 G 17 G 18 U 19 A 20 G 21 A 22 A 23 C 24 A 25 C 26 C 27 A 28 C 29 C 30 U 31 U 32 G 33 C 34 C 35 A 36 A 37 G 38 G 39 U 40 G 41 G 42 G 43 G 44 G 45 U 46 C 47 G 48 C 49 G 50 G 51 G 52 U 53 U 54 C 55 G 56 A 57 A 58 U 59 C 60 C 61 C 62 G 63 U 64 C 65 U 66 C 67 G 68 G 69 G 70 C 71 G 72 A 73 A 74 A 75 G 76 C 77 C 78 C 79
Unit 9	G 1 G 2 G 3 U 4 G 5 C 6 G 7 A 8 U 9 G 10 A 11 G 12 A 13 A 14 G 15 A 16 A 17 G 18 A 19 G 20 U 21 A 22 U 23 U 24 A 25 A 26 G 27 G 28 A 29 U 30 U 31 U 32 A 33 C 34 U 35 A 36 U 37 G 38 A 39 U 40 U 41 A 42 G 43 C 44 G 45 A 46 C 47 U 48 C 49 U 50 A 51 G 52 G 53 A 54 U 55 A 56 G 57 U 58 G 59 A 60 A 61 A 62 G 63 C 64 U 65 A 66 G 67 A 68 G 69 G 70 A 71 U 72 A 73 G 74 U 75 A 76 A 77 C 78 C 79 U 80 U 81 A 82 A 83 G 84 A 85 A 86 G 87 G 88 C 89 A 90 C 91 U 92 U 93 C 94 G 95 A 96 G 97 C 98 A 99 C 100 C 101 C 102
Unit 11	G 5 A 6 G 7 U 8 A 9 G 10 U 11 U 12 C 13 A 14 G 15 U 16 G 17 G 18 U 19 A 20 G 21 A 22 A 23 C 24 A 25 C 26 C 27 A 28 C 29 C 30 U 31 U 32 G 33 C 34 C 35 A 36 A 37 G 38 G 39 U 40 G 41 G 42 G 43 G 44 G 45 U 46 C 47 G 48 C 49 G 50 G 51 G 52 U 53 U 54 C 55 G 56 A 57 A 58 U 59 C 60 C 61 C 62 G 63 U 64 C 65 U 66 C 67 G 68 G 69 G 70 C 71 G 72 A 73 A 74 A 75 G 76 C 77 C 78 C 79
Unit 12	G 1 G 2 G 3 U 4 G 5 C 6 G 7 A 8 U 9 G 10 A 11 G 12 A 13 A 14 G 15 A 16 A 17 G 18 A 19 G 20 U 21 A 22 U 23 U 24 A 25 A 26 G 27 G 28 A 29 U 30 U 31 U 32 A 33 C 34 U 35 A 36 U 37 G 38 A 39 U 40 U 41 A 42 G 43 C 44 G 45 A 46 C 47 U 48 C 49 U 50 A 51 G 52 G 53 A 54 U 55 A 56 G 57 U 58 G 59 A 60 A 61 A 62 G 63 C 64 U 65 A 66 G 67 A 68 G 69 G 70 A 71 U 72 A 73 G 74 U 75 A 76 A 77 C 78 C 79 U 80 U 81 A 82 A 83 G 84 A 85 A 86 G 87 G 88 C 89 A 90 C 91 U 92 U 93 C 94 G 95 A 96 G 97 C 98 A 99 C 100 C 101 C 102

Ligands

Unit 13	MG 101 MG 102
Unit 14	MG 201 MG 202 MG 203 MG 204
Unit 15	MG 101 MG 102 MG 103 MG 104 MG 105 MG 106 MG 107
Unit 16	MG 201 MG 202 MG 203 MG 204
Unit 17	MG 101 MG 102 MG 103 MG 104 MG 105
Unit 18	MG 201 MG 202 MG 203 MG 204 MG 205
Unit 19	MG 201 MG 202