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Sequence, Chains, Asymmetric and Biological Units

Title DROSOPHILA STEM-LOOP BINDING PROTEIN COMPLEXED WITH HISTONE LOOP
Keywords SLBP, HISTONE MRNA STEM-LOOP, RNA BINDING PROTEIN-RNA COMPLE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HISTONE RNA HAIRPIN-BINDING PROTEIN  A 71 573 0
2  Protein   HISTONE RNA HAIRPIN-BINDING PROTEIN  B 67 562 0
3  RNA    D 26 548 0
4  RNA    C 25 528 0
5  Ligand   RNA (26-MER)  D 3 0 3
6  Ligand   RNA (26-MER)  C 1 0 1
total       193 2211 4

Proteins
Unit 1 SER186 TYR187 THR188 GLU189 ALA190 ASP191 PRO192 ALA193 ILE194 LEU195 SER196 ARG197 ARG198 GLN199 LYS200 GLN201 ILE202 ASP203 TYR204 GLY205 LYS206 ASN207 THR208 ALA209 ALA210 TYR211 GLU212 ARG213 TYR214 VAL215 GLU216 MET217 VAL218 PRO219 LYS220 ASP221 GLU222 ARG223 THR224 ARG225 HIS227 PRO228 ARG229 THR230 PRO231 ASN232 LYS233 TYR234 GLY235 LYS236 TYR237 SER238 ARG239 ARG240 ALA241 PHE242 ASP243 GLY244 LEU245 VAL246 LYS247 ILE248 TRP249 ARG250 LYS251 SER252 LEU253 HIS254 ILE255 TYR256 ASP257
Unit 2 SER186 TYR187 THR188 GLU189 ALA190 ASP191 PRO192 ALA193 ILE194 LEU195 SER196 ARG197 ARG198 GLN199 LYS200 GLN201 ILE202 ASP203 TYR204 GLY205 LYS206 ASN207 THR208 ALA209 ALA210 TYR211 GLU212 ARG213 TYR214 VAL215 GLU216 MET217 VAL218 PRO219 LYS220 ASP221 GLU222 HIS227 PRO228 ARG229 THR230 PRO231 ASN232 LYS233 TYR234 GLY235 LYS236 TYR237 SER238 ARG239 ARG240 ALA241 PHE242 ASP243 GLY244 LEU245 VAL246 LYS247 ILE248 TRP249 ARG250 LYS251 SER252 LEU253 HIS254 ILE255 TYR256

Nucleic acids
Unit 3 G1 G2 C3 C4 A5 A6 A7 G8 G9 C10 C11 C12 U13 U14 U15 U16 C17 A18 G19 G20 G21 C22 C23 A24 C25 C26
Unit 4 G1 G2 C3 C4 A5 A6 A7 G8 G9 C10 C11 C12 U13 U14 U15 U16 C17 A18 G19 G20 G21 C22 C23 A24 C25

Ligands
Unit 5 CA101 CA102 CA103
Unit 6 CA101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany