4TUP - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH GG AS TEMPLATE (GG0B) IN A 1-NUCLEOTIDE GAPPED DNA
• Keywords: DNA POLYMERASE, TRANSFERASE, LYASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4TUP	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA POLYMERASE BETA	A	326	2588	0
2	Other macromolecule	DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP 3')	T	16	314	0
3	Other macromolecule	DNA (5'-D(*GP*GP*TP*GP*AP*TP*GP*GP*GP*C)-3')	P	10	209	0
4	Other macromolecule	DNA (5'-D(P*GP*TP*GP*GP*G)-3')	D	5	109	0
5	Ligand	DNA POLYMERASE BETA	A	2	0	2
6	Water			289	0	289
total				648	3220	291

Proteins

Unit 1

PRO 7 GLN 8 GLU 9 THR 10 LEU 11 ASN 12 GLY 13 GLY 14 ILE 15 THR 16 ASP 17 MET 18 LEU 19 THR 20 GLU 21 LEU 22 ALA 23 ASN 24 PHE 25 GLU 26 LYS 27 ASN 28 VAL 29 SER 30 GLN 31 ALA 32 ILE 33 HIS 34 LYS 35 TYR 36 ASN 37 ALA 38 TYR 39 ARG 40 LYS 41 ALA 42 ALA 43 SER 44 VAL 45 ILE 46 ALA 47 LYS 48 TYR 49 PRO 50 HIS 51 LYS 52 ILE 53 LYS 54 SER 55 GLY 56 ALA 57 GLU 58 ALA 59 LYS 60 LYS 61 LEU 62 PRO 63 GLY 64 VAL 65 GLY 66 THR 67 LYS 68 ILE 69 ALA 70 GLU 71 LYS 72 ILE 73 ASP 74 GLU 75 PHE 76 LEU 77 ALA 78 THR 79 GLY 80 LYS 81 LEU 82 ARG 83 LYS 84 LEU 85 GLU 86 LYS 87 ILE 88 ARG 89 GLN 90 ASP 91 ASP 92 THR 93 SER 94 SER 95 SER 96 ILE 97 ASN 98 PHE 99 LEU 100 THR 101 ARG 102 VAL 103 SER 104 GLY 105 ILE 106 GLY 107 PRO 108 SER 109 ALA 110 ALA 111 ARG 112 LYS 113 PHE 114 VAL 115 ASP 116 GLU 117 GLY 118 ILE 119 LYS 120 THR 121 LEU 122 GLU 123 ASP 124 LEU 125 ARG 126 LYS 127 ASN 128 GLU 129 ASP 130 LYS 131 LEU 132 ASN 133 HIS 134 HIS 135 GLN 136 ARG 137 ILE 138 GLY 139 LEU 140 LYS 141 TYR 142 PHE 143 GLY 144 ASP 145 PHE 146 GLU 147 LYS 148 ARG 149 ILE 150 PRO 151 ARG 152 GLU 153 GLU 154 MET 155 LEU 156 GLN 157 MET 158 GLN 159 ASP 160 ILE 161 VAL 162 LEU 163 ASN 164 GLU 165 VAL 166 LYS 167 LYS 168 VAL 169 ASP 170 SER 171 GLU 172 TYR 173 ILE 174 ALA 175 THR 176 VAL 177 CYS 178 GLY 179 SER 180 PHE 181 ARG 182 ARG 183 GLY 184 ALA 185 GLU 186 SER 187 SER 188 GLY 189 ASP 190 MET 191 ASP 192 VAL 193 LEU 194 LEU 195 THR 196 HIS 197 PRO 198 SER 199 PHE 200 THR 201 SER 202 GLU 203 SER 204 GLN 205 PRO 206 LYS 207 LEU 208 LEU 209 HIS 210 GLN 211 VAL 212 VAL 213 GLU 214 GLN 215 LEU 216 GLN 217 LYS 218 VAL 219 HIS 220 PHE 221 ILE 222 THR 223 ASP 224 THR 225 LEU 226 SER 227 LYS 228 GLY 229 GLU 230 THR 231 LYS 232 PHE 233 MET 234 GLY 235 VAL 236 CYS 237 GLN 238 LEU 239 PRO 240 SER 241 LYS 242 ASP 243 GLU 244 LYS 245 GLU 246 TYR 247 PRO 248 HIS 249 ARG 250 ARG 251 ILE 252 ASP 253 ILE 254 ARG 255 LEU 256 ILE 257 PRO 258 LYS 259 ASP 260 GLN 261 TYR 262 TYR 263 CYS 264 GLY 265 VAL 266 LEU 267 TYR 268 PHE 269 THR 270 GLY 271 SER 272 ASP 273 ILE 274 PHE 275 ASN 276 LYS 277 ASN 278 MET 279 ARG 280 ALA 281 HIS 282 ALA 283 LEU 284 GLU 285 LYS 286 GLY 287 PHE 288 THR 289 ILE 290 ASN 291 GLU 292 TYR 293 THR 294 ILE 295 ARG 296 PRO 297 LEU 298 GLY 299 VAL 300 THR 301 GLY 302 VAL 303 ALA 304 GLY 305 GLU 306 PRO 307 LEU 308 PRO 309 VAL 310 ASP 311 SER 312 GLU 313 LYS 314 ASP 315 ILE 316 PHE 317 ASP 318 TYR 319 ILE 320 GLN 321 TRP 322 LYS 323 TYR 324 ARG 325 GLU 326 PRO 327 LYS 328 ASP 329 ARG 330 SER 331 GLU 332

Other macromolecules

Unit 2	DC 1 DC 2 DC 3 DA 4 DC 5 DG 6 DG 7 DC 8 DC 9 DC 10 DA 11 DT 12 DC 13 DA 14 DC 15 DC 16
Unit 3	DG 1 DG 2 DT 3 DG 4 DA 5 DT 6 DG 7 DG 8 DG 9 DC 10
Unit 4	DG 1 DT 2 DG 3 DG 4 DG 5

Ligands

Unit 5

NA 401 NA 402