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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF U2AF65 VARIANT WITH BRU5A6 DNA
Keywords RNA SPLICING FACTOR, RNA RECOGNITION MOTIF, RNA BINDING PROT BINDING PROTEIN-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4TU8     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SPLICING FACTOR U2AF 65 KDA SUBUNIT  A 174 1342 0
2  Protein   SPLICING FACTOR U2AF 65 KDA SUBUNIT  B 174 1342 0
3  DNA    P 7 113 20
4  DNA    E 6 94 20
5  Ligand   SPLICING FACTOR U2AF 65 KDA SUBUNIT  A 10 0 48
6  Ligand   SPLICING FACTOR U2AF 65 KDA SUBUNIT  B 11 0 78
7 Water     295 0 295
total       677 2891 461
Proteins
Unit 1 GLY143 PRO144 LEU145 GLY146 SER147 ALA148 ARG149 ARG150 LEU151 TYR152 VAL153 GLY154 ASN155 ILE156 PRO157 PHE158 GLY159 ILE160 THR161 GLU162 GLU163 ALA164 MET165 MET166 ASP167 PHE168 PHE169 ASN170 ALA171 GLN172 MET173 ARG174 LEU175 GLY176 GLY177 LEU178 THR179 GLN180 ALA181 PRO182 GLY183 ASN184 PRO185 VAL186 LEU187 ALA188 VAL189 GLN190 ILE191 ASN192 GLN193 ASP194 LYS195 ASN196 PHE197 ALA198 PHE199 LEU200 GLU201 PHE202 ARG203 SER204 VAL205 ASP206 GLU207 THR208 THR209 GLN210 ALA211 MET212 ALA213 PHE214 ASP215 GLY216 ILE217 ILE218 PHE219 GLN220 GLY221 GLN222 SER223 LEU224 LYS225 ILE226 ARG227 ARG228 PRO229 HIS230 ASP231 TYR232 GLN233 PRO234 LEU235 PRO236 GLY237 ALA258 HIS259 LYS260 LEU261 PHE262 ILE263 GLY264 GLY265 LEU266 PRO267 ASN268 TYR269 LEU270 ASN271 ASP272 ASP273 GLN274 VAL275 LYS276 GLU277 LEU278 LEU279 THR280 SER281 PHE282 GLY283 PRO284 LEU285 LYS286 ALA287 PHE288 ASN289 LEU290 VAL291 LYS292 ASP293 SER294 ALA295 THR296 GLY297 LEU298 SER299 LYS300 GLY301 TYR302 ALA303 PHE304 CYS305 GLU306 TYR307 VAL308 ASP309 ILE310 ASN311 VAL312 THR313 ASP314 GLN315 ALA316 ILE317 ALA318 GLY319 LEU320 ASN321 GLY322 MET323 GLN324 LEU325 GLY326 ASP327 LYS328 LYS329 LEU330 LEU331 VAL332 GLN333 ARG334 ALA335 SER336
Unit 2 GLY143 PRO144 LEU145 GLY146 SER147 ALA148 ARG149 ARG150 LEU151 TYR152 VAL153 GLY154 ASN155 ILE156 PRO157 PHE158 GLY159 ILE160 THR161 GLU162 GLU163 ALA164 MET165 MET166 ASP167 PHE168 PHE169 ASN170 ALA171 GLN172 MET173 ARG174 LEU175 GLY176 GLY177 LEU178 THR179 GLN180 ALA181 PRO182 GLY183 ASN184 PRO185 VAL186 LEU187 ALA188 VAL189 GLN190 ILE191 ASN192 GLN193 ASP194 LYS195 ASN196 PHE197 ALA198 PHE199 LEU200 GLU201 PHE202 ARG203 SER204 VAL205 ASP206 GLU207 THR208 THR209 GLN210 ALA211 MET212 ALA213 PHE214 ASP215 GLY216 ILE217 ILE218 PHE219 GLN220 GLY221 GLN222 SER223 LEU224 LYS225 ILE226 ARG227 ARG228 PRO229 HIS230 ASP231 TYR232 GLN233 PRO234 LEU235 PRO236 GLY237 ALA258 HIS259 LYS260 LEU261 PHE262 ILE263 GLY264 GLY265 LEU266 PRO267 ASN268 TYR269 LEU270 ASN271 ASP272 ASP273 GLN274 VAL275 LYS276 GLU277 LEU278 LEU279 THR280 SER281 PHE282 GLY283 PRO284 LEU285 LYS286 ALA287 PHE288 ASN289 LEU290 VAL291 LYS292 ASP293 SER294 ALA295 THR296 GLY297 LEU298 SER299 LYS300 GLY301 TYR302 ALA303 PHE304 CYS305 GLU306 TYR307 VAL308 ASP309 ILE310 ASN311 VAL312 THR313 ASP314 GLN315 ALA316 ILE317 ALA318 GLY319 LEU320 ASN321 GLY322 MET323 GLN324 LEU325 GLY326 ASP327 LYS328 LYS329 LEU330 LEU331 VAL332 GLN333 ARG334 ALA335 SER336
Nucleic acids
Unit 3 DU1 DU2 DU3 DU4 BRU5 DA6 DU7
Unit 4 DU1 DU2 DU3 DU4 BRU5 DA6
Ligands
Unit 5 DIO401 DIO402 GOL403 EDO404 EDO405 EDO406 EDO407 EDO408 SO4409 SO4410
Unit 6 DIO401 DIO402 DIO403 DIO404 DIO405 CPQ406 EDO407 EDO408 EDO409 EDO410 SO4411
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany