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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TRABID NZF1 IN COMPLEX WITH K29 LINKED UBIQUITIN
Keywords ZINC FINGER, HYDROLASE, PROTEASE, UBIQUITIN BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4S1Z     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   UBIQUITIN  A 73 562 0
2  Protein   UBIQUITIN  B 73 567 0
3  Protein   UBIQUITIN  C 73 539 0
4  Protein   UBIQUITIN  D 75 492 0
5  Protein   UBIQUITIN  E 72 511 0
6  Protein   UBIQUITIN THIOESTERASE ZRANB1  F 27 192 0
7  Protein   UBIQUITIN THIOESTERASE ZRANB1  G 27 216 0
8  Protein   UBIQUITIN THIOESTERASE ZRANB1  H 27 197 0
9  Protein   UBIQUITIN THIOESTERASE ZRANB1  J 25 165 0
10  Protein   UBIQUITIN THIOESTERASE ZRANB1  I 26 182 0
11  Ligand   UBIQUITIN THIOESTERASE ZRANB1  F 1 0 1
12  Ligand   UBIQUITIN THIOESTERASE ZRANB1  G 1 0 1
13  Ligand   UBIQUITIN THIOESTERASE ZRANB1  H 1 0 1
14  Ligand   UBIQUITIN THIOESTERASE ZRANB1  J 1 0 1
15  Ligand   UBIQUITIN THIOESTERASE ZRANB1  I 1 0 1
total       503 3623 5

Proteins
Unit 1 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73
Unit 2 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73
Unit 3 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73
Unit 4 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73 ARG74 GLY75
Unit 5 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72
Unit 6 ILE6 LYS7 TRP8 ALA9 CYS10 GLU11 TYR12 CYS13 THR14 TYR15 GLU16 ASN17 TRP18 PRO19 SER20 ALA21 ILE22 LYS23 CYS24 THR25 MET26 CYS27 ARG28 ALA29 GLN30 ARG31 PRO32
Unit 7 ILE6 LYS7 TRP8 ALA9 CYS10 GLU11 TYR12 CYS13 THR14 TYR15 GLU16 ASN17 TRP18 PRO19 SER20 ALA21 ILE22 LYS23 CYS24 THR25 MET26 CYS27 ARG28 ALA29 GLN30 ARG31 PRO32
Unit 8 ILE6 LYS7 TRP8 ALA9 CYS10 GLU11 TYR12 CYS13 THR14 TYR15 GLU16 ASN17 TRP18 PRO19 SER20 ALA21 ILE22 LYS23 CYS24 THR25 MET26 CYS27 ARG28 ALA29 GLN30 ARG31 PRO32
Unit 9 ILE6 LYS7 TRP8 ALA9 CYS10 GLU11 TYR12 CYS13 THR14 TYR15 GLU16 ASN17 TRP18 PRO19 SER20 ALA21 ILE22 LYS23 CYS24 THR25 MET26 CYS27 ARG28 ALA29 GLN30
Unit 10 ILE6 LYS7 TRP8 ALA9 CYS10 GLU11 TYR12 CYS13 THR14 TYR15 GLU16 ASN17 TRP18 PRO19 SER20 ALA21 ILE22 LYS23 CYS24 THR25 MET26 CYS27 ARG28 ALA29 GLN30 ARG31

Ligands
Unit 11 ZN101
Unit 12 ZN101
Unit 13 ZN101
Unit 14 ZN101
Unit 15 ZN101

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany