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Sequence, Chains, Asymmetric and Biological Units

Title FV M6P-1 IN COMPLEX WITH MANNOSE-6-PHOSPHATE
Keywords ANTIBODY VARIABLE FRAGMENT, MANNOSE-6-PHOSPHATE, IMMUNE SYST
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4RZC     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FV M6P-1 LIGHT CHAIN  H 118 885 0
2  Protein   FV M6P-1 HEAVY CHAIN  L 110 836 0
3  Protein   FV M6P-1 LIGHT CHAIN  A 119 890 0
4  Protein   FV M6P-1 HEAVY CHAIN  B 109 826 0
5  Protein   FV M6P-1 LIGHT CHAIN  C 117 879 0
6  Protein   FV M6P-1 HEAVY CHAIN  D 111 842 0
7  Protein   FV M6P-1 LIGHT CHAIN  E 117 879 0
8  Protein   FV M6P-1 HEAVY CHAIN  F 111 842 0
9  Ligand   FV M6P-1 LIGHT CHAIN  H 1 0 16
10  Ligand   FV M6P-1 HEAVY CHAIN  L 1 0 5
11  Ligand   FV M6P-1 LIGHT CHAIN  A 1 0 16
12  Ligand   FV M6P-1 HEAVY CHAIN  B 1 0 5
13  Ligand   FV M6P-1 LIGHT CHAIN  C 1 0 16
14  Ligand   FV M6P-1 HEAVY CHAIN  D 2 0 10
15  Ligand   FV M6P-1 LIGHT CHAIN  E 1 0 16
16  Ligand   FV M6P-1 HEAVY CHAIN  F 2 0 10
17 Water     153 0 153
total       1075 6879 247
Proteins
Unit 1 SER1 GLN2 SER3 VAL4 LYS5 GLU6 SER7 GLU8 GLY9 ASP10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 LEU18 THR19 LEU20 THR21 CYS22 LYS23 ALA24 SER25 GLY26 PHE27 ASP28 PHE29 THR30 TRP31 TYR32 THR33 MET34 ASN35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 ILE48 ALA49 SER50 ILE51 GLY52 ALA52A GLY52B VAL53 TYR54 GLY55 SER56 ASN57 TYR58 TYR59 ALA60 SER61 TRP62 ALA63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 LYS71 ALA72 SER73 SER74 THR75 THR76 VAL77 THR78 LEU79 GLN80 MET81 THR82 SER82A LEU82B THR83 VAL84 ALA85 ASP86 THR87 ALA88 THR89 TYR90 PHE91 CYS92 ALA93 ARG94 ASP95 GLY96 ILE97 ASN98 GLY99 GLY100 TYR100A ASP101 ILE102 TRP103 GLY104 PRO105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113
Unit 2 LEU2 VAL3 MET4 THR5 GLN6 THR7 GLU8 SER9 PRO10 VAL11 SER12 ALA13 ALA14 GLY16 GLY17 THR18 VAL19 THR20 ILE21 LYS22 CYS23 GLN24 SER25 SER26 GLN27 SER27A VAL28 TYR29 ASN30 ASN31 ARG32 LEU33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ARG43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 SER50 ALA51 SER52 THR53 LEU54 ALA55 SER56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 LYS63 GLY64 SER65 GLY66 SER67 GLY68 THR69 GLN70 PHE71 THR72 LEU73 THR74 ILE75 SER76 ASP77 LEU78 GLU79 TRP80 GLY81 ASP82 ALA83 ALA84 THR85 TYR86 TYR87 CYS88 HIS89 GLY90 GLY91 TYR92 ARG93 ASN95 ASP95A ASP95B ARG95C TYR96 ALA97 PHE98 SER99 GLY100 GLY101 THR102 GLU103 LEU104 GLU105 ILE106 LEU106A SER107 SER108
Unit 3 ALA0 SER1 GLN2 SER3 VAL4 LYS5 GLU6 SER7 GLU8 GLY9 ASP10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 LEU18 THR19 LEU20 THR21 CYS22 LYS23 ALA24 SER25 GLY26 PHE27 ASP28 PHE29 THR30 TRP31 TYR32 THR33 MET34 ASN35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 ILE48 ALA49 SER50 ILE51 GLY52 ALA52A GLY52B VAL53 TYR54 GLY55 SER56 ASN57 TYR58 TYR59 ALA60 SER61 TRP62 ALA63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 LYS71 ALA72 SER73 SER74 THR75 THR76 VAL77 THR78 LEU79 GLN80 MET81 THR82 SER82A LEU82B THR83 VAL84 ALA85 ASP86 THR87 ALA88 THR89 TYR90 PHE91 CYS92 ALA93 ARG94 ASP95 GLY96 ILE97 ASN98 GLY99 GLY100 TYR100A ASP101 ILE102 TRP103 GLY104 PRO105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113
Unit 4 LEU2 VAL3 MET4 THR5 GLN6 THR7 GLU8 SER9 PRO10 VAL11 SER12 ALA13 ALA14 GLY16 GLY17 THR18 VAL19 THR20 ILE21 LYS22 CYS23 GLN24 SER25 SER26 GLN27 SER27A VAL28 TYR29 ASN30 ASN31 ARG32 LEU33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ARG43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 SER50 ALA51 SER52 THR53 LEU54 ALA55 SER56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 LYS63 GLY64 SER65 GLY66 SER67 GLY68 THR69 GLN70 PHE71 THR72 LEU73 THR74 ILE75 SER76 ASP77 LEU78 GLU79 TRP80 GLY81 ASP82 ALA83 ALA84 THR85 TYR86 TYR87 CYS88 HIS89 GLY90 GLY91 TYR92 ARG93 SER94 ASP95B ARG95C TYR96 ALA97 PHE98 SER99 GLY100 GLY101 THR102 GLU103 LEU104 GLU105 ILE106 LEU106A SER107 SER108
Unit 5 GLN2 SER3 VAL4 LYS5 GLU6 SER7 GLU8 GLY9 ASP10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 LEU18 THR19 LEU20 THR21 CYS22 LYS23 ALA24 SER25 GLY26 PHE27 ASP28 PHE29 THR30 TRP31 TYR32 THR33 MET34 ASN35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 ILE48 ALA49 SER50 ILE51 GLY52 ALA52A GLY52B VAL53 TYR54 GLY55 SER56 ASN57 TYR58 TYR59 ALA60 SER61 TRP62 ALA63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 LYS71 ALA72 SER73 SER74 THR75 THR76 VAL77 THR78 LEU79 GLN80 MET81 THR82 SER82A LEU82B THR83 VAL84 ALA85 ASP86 THR87 ALA88 THR89 TYR90 PHE91 CYS92 ALA93 ARG94 ASP95 GLY96 ILE97 ASN98 GLY99 GLY100 TYR100A ASP101 ILE102 TRP103 GLY104 PRO105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113
Unit 6 LEU2 VAL3 MET4 THR5 GLN6 THR7 GLU8 SER9 PRO10 VAL11 SER12 ALA13 ALA14 GLY16 GLY17 THR18 VAL19 THR20 ILE21 LYS22 CYS23 GLN24 SER25 SER26 GLN27 SER27A VAL28 TYR29 ASN30 ASN31 ARG32 LEU33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ARG43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 SER50 ALA51 SER52 THR53 LEU54 ALA55 SER56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 LYS63 GLY64 SER65 GLY66 SER67 GLY68 THR69 GLN70 PHE71 THR72 LEU73 THR74 ILE75 SER76 ASP77 LEU78 GLU79 TRP80 GLY81 ASP82 ALA83 ALA84 THR85 TYR86 TYR87 CYS88 HIS89 GLY90 GLY91 TYR92 ARG93 SER94 ASN95 ASP95A ASP95B ARG95C TYR96 ALA97 PHE98 SER99 GLY100 GLY101 THR102 GLU103 LEU104 GLU105 ILE106 LEU106A SER107 SER108
Unit 7 GLN2 SER3 VAL4 LYS5 GLU6 SER7 GLU8 GLY9 ASP10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 LEU18 THR19 LEU20 THR21 CYS22 LYS23 ALA24 SER25 GLY26 PHE27 ASP28 PHE29 THR30 TRP31 TYR32 THR33 MET34 ASN35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 ILE48 ALA49 SER50 ILE51 GLY52 ALA52A GLY52B VAL53 TYR54 GLY55 SER56 ASN57 TYR58 TYR59 ALA60 SER61 TRP62 ALA63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 LYS71 ALA72 SER73 SER74 THR75 THR76 VAL77 THR78 LEU79 GLN80 MET81 THR82 SER82A LEU82B THR83 VAL84 ALA85 ASP86 THR87 ALA88 THR89 TYR90 PHE91 CYS92 ALA93 ARG94 ASP95 GLY96 ILE97 ASN98 GLY99 GLY100 TYR100A ASP101 ILE102 TRP103 GLY104 PRO105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113
Unit 8 LEU2 VAL3 MET4 THR5 GLN6 THR7 GLU8 SER9 PRO10 VAL11 SER12 ALA13 ALA14 GLY16 GLY17 THR18 VAL19 THR20 ILE21 LYS22 CYS23 GLN24 SER25 SER26 GLN27 SER27A VAL28 TYR29 ASN30 ASN31 ARG32 LEU33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ARG43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 SER50 ALA51 SER52 THR53 LEU54 ALA55 SER56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 LYS63 GLY64 SER65 GLY66 SER67 GLY68 THR69 GLN70 PHE71 THR72 LEU73 THR74 ILE75 SER76 ASP77 LEU78 GLU79 TRP80 GLY81 ASP82 ALA83 ALA84 THR85 TYR86 TYR87 CYS88 HIS89 GLY90 GLY91 TYR92 ARG93 SER94 ASN95 ASP95A ASP95B ARG95C TYR96 ALA97 PHE98 SER99 GLY100 GLY101 THR102 GLU103 LEU104 GLU105 ILE106 LEU106A SER107 SER108
Ligands
Unit 9 M6P201
Unit 10 SO4201
Unit 11 M6P201
Unit 12 SO4201
Unit 13 M6P201
Unit 14 SO4201 SO4202
Unit 15 M6P201
Unit 16 SO4201 SO4202
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany