4RUL - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF FULL-LENGTH E.COLI TOPOISOMERASE I IN C WITH SSDNA
• Keywords: TOPOISOMERASE 1A, ISOMERASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4RUL	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA TOPOISOMERASE 1	A	823	6141	0
2	Other macromolecule	SINGLE STRAND DNA	B	13	252	0
3	Ligand	DNA TOPOISOMERASE 1	A	9	0	30
4	Water			38	0	38
total				883	6393	68

Proteins

Unit 1

GLY 2 LYS 3 ALA 4 LEU 5 VAL 6 ILE 7 VAL 8 GLU 9 SER 10 PRO 11 ALA 12 LYS 13 ALA 14 LYS 15 THR 16 ILE 17 ASN 18 LYS 19 TYR 20 LEU 21 GLY 22 SER 23 ASP 24 TYR 25 VAL 26 VAL 27 LYS 28 SER 29 SER 30 VAL 31 GLY 32 HIS 33 ILE 34 ARG 35 ASP 36 LEU 37 PRO 38 THR 39 LYS 61 ASP 62 GLU 63 ARG 64 GLY 65 ALA 66 LEU 67 VAL 68 ASN 69 ARG 70 MET 71 GLY 72 VAL 73 ASP 74 PRO 75 TRP 76 HIS 77 ASN 78 TRP 79 GLU 80 ALA 81 HIS 82 TYR 83 GLU 84 VAL 85 LEU 86 PRO 87 GLY 88 LYS 89 GLU 90 LYS 91 VAL 92 VAL 93 SER 94 GLU 95 LEU 96 LYS 97 GLN 98 LEU 99 ALA 100 GLU 101 LYS 102 ALA 103 ASP 104 HIS 105 ILE 106 TYR 107 LEU 108 ALA 109 THR 110 ASP 111 LEU 112 ASP 113 ARG 114 GLU 115 GLY 116 GLU 117 ALA 118 ILE 119 ALA 120 TRP 121 HIS 122 LEU 123 ARG 124 GLU 125 VAL 126 ILE 127 GLY 128 GLY 129 ASP 130 ASP 131 ALA 132 ARG 133 TYR 134 SER 135 ARG 136 VAL 137 VAL 138 PHE 139 ASN 140 GLU 141 ILE 142 THR 143 LYS 144 ASN 145 ALA 146 ILE 147 ARG 148 GLN 149 ALA 150 PHE 151 ASN 152 LYS 153 PRO 154 GLY 155 GLU 156 LEU 157 ASN 158 ILE 159 ASP 160 ARG 161 VAL 162 ASN 163 ALA 164 GLN 165 GLN 166 ALA 167 ARG 168 ARG 169 PHE 170 MET 171 ASP 172 ARG 173 VAL 174 VAL 175 GLY 176 TYR 177 MET 178 VAL 179 SER 180 PRO 181 LEU 182 LEU 183 TRP 184 LYS 185 LYS 186 ILE 187 ALA 188 ARG 189 GLY 190 LEU 191 SER 192 ALA 193 GLY 194 ARG 195 VAL 196 GLN 197 SER 198 VAL 199 ALA 200 VAL 201 ARG 202 LEU 203 VAL 204 VAL 205 GLU 206 ARG 207 GLU 208 ARG 209 GLU 210 ILE 211 LYS 212 ALA 213 PHE 214 VAL 215 PRO 216 GLU 217 GLU 218 PHE 219 TRP 220 GLU 221 VAL 222 ASP 223 ALA 224 SER 225 THR 226 THR 227 THR 228 PRO 229 SER 230 GLY 231 GLU 232 ALA 233 LEU 234 ALA 235 LEU 236 GLN 237 VAL 238 THR 239 HIS 240 GLN 241 ASN 242 ASP 243 LYS 244 PRO 245 PHE 246 ARG 247 PRO 248 VAL 249 ASN 250 LYS 251 GLU 252 GLN 253 THR 254 GLN 255 ALA 256 ALA 257 VAL 258 SER 259 LEU 260 LEU 261 GLU 262 LYS 263 ALA 264 ARG 265 TYR 266 SER 267 VAL 268 LEU 269 GLU 270 ARG 271 GLU 272 ASP 273 LYS 274 PRO 275 THR 276 THR 277 SER 278 LYS 279 PRO 280 GLY 281 ALA 282 PRO 283 PHE 284 ILE 285 THR 286 SER 287 THR 288 LEU 289 GLN 290 GLN 291 ALA 292 ALA 293 SER 294 THR 295 ARG 296 LEU 297 GLY 298 PHE 299 GLY 300 VAL 301 LYS 302 LYS 303 THR 304 MET 305 MET 306 MET 307 ALA 308 GLN 309 ARG 310 LEU 311 TYR 312 GLU 313 ALA 314 GLY 315 TYR 316 ILE 317 THR 318 TYR 319 MET 320 ARG 321 THR 322 ASP 323 SER 324 THR 325 ASN 326 LEU 327 SER 328 GLN 329 ASP 330 ALA 331 VAL 332 ASN 333 MET 334 VAL 335 ARG 336 GLY 337 TYR 338 ILE 339 SER 340 ASP 341 ASN 342 PHE 343 GLY 344 LYS 345 LYS 346 TYR 347 LEU 348 PRO 349 GLU 350 SER 351 PRO 352 ASN 353 GLN 354 TYR 355 ALA 356 SER 357 LYS 358 GLN 362 GLU 363 ALA 364 HIS 365 GLU 366 ALA 367 ILE 368 ARG 369 PRO 370 SER 371 ASP 372 VAL 373 ASN 374 VAL 375 MET 376 ALA 377 GLU 378 SER 379 LEU 380 LYS 381 ASP 382 MET 383 GLU 384 ALA 385 ASP 386 ALA 387 GLN 388 LYS 389 LEU 390 TYR 391 GLN 392 LEU 393 ILE 394 TRP 395 ARG 396 GLN 397 PHE 398 VAL 399 ALA 400 CYS 401 GLN 402 MET 403 THR 404 PRO 405 ALA 406 LYS 407 TYR 408 ASP 409 SER 410 THR 411 THR 412 LEU 413 THR 414 VAL 415 GLY 416 ALA 417 GLY 418 ASP 419 PHE 420 ARG 421 LEU 422 LYS 423 ALA 424 ARG 425 GLY 426 ARG 427 ILE 428 LEU 429 ARG 430 PHE 431 ASP 432 GLY 433 TRP 434 THR 435 LYS 436 VAL 437 MET 438 PRO 439 ALA 440 LEU 441 ARG 442 LYS 443 GLY 444 ASP 445 GLU 446 ASP 447 ARG 448 ILE 449 LEU 450 PRO 451 ALA 452 VAL 453 ASN 454 LYS 455 GLY 456 ASP 457 ALA 458 LEU 459 THR 460 LEU 461 VAL 462 GLU 463 LEU 464 THR 465 PRO 466 ALA 467 GLN 468 HIS 469 PHE 470 THR 471 LYS 472 PRO 473 PRO 474 ALA 475 ARG 476 PHE 477 SER 478 GLU 479 ALA 480 SER 481 LEU 482 VAL 483 LYS 484 GLU 485 LEU 486 GLU 487 LYS 488 ARG 489 GLY 490 ILE 491 GLY 492 ARG 493 PRO 494 SER 495 THR 496 TYR 497 ALA 498 SER 499 ILE 500 ILE 501 SER 502 THR 503 ILE 504 GLN 505 ASP 506 ARG 507 GLY 508 TYR 509 VAL 510 ARG 511 VAL 512 GLU 513 ASN 514 ARG 515 ARG 516 PHE 517 TYR 518 ALA 519 GLU 520 LYS 521 MET 522 GLY 523 GLU 524 ILE 525 VAL 526 THR 527 ASP 528 ARG 529 LEU 530 GLU 531 GLU 532 ASN 533 PHE 534 ARG 535 GLU 536 LEU 537 MET 538 ASN 539 TYR 540 ASP 541 PHE 542 THR 543 ALA 544 GLN 545 MET 546 GLU 547 ASN 548 SER 549 LEU 550 ASP 551 GLN 552 VAL 553 ALA 554 ASN 555 HIS 556 GLU 557 ALA 558 GLU 559 TRP 560 LYS 561 ALA 562 VAL 563 LEU 564 ASP 565 HIS 566 PHE 567 PHE 568 SER 569 ASP 570 PHE 571 THR 572 GLN 573 GLN 574 LEU 575 ASP 576 LYS 577 ALA 578 GLU 579 LYS 580 ASP 581 PRO 582 GLU 583 GLU 584 GLY 585 GLY 586 MET 587 ARG 588 PRO 589 ASN 590 GLN 591 MET 592 VAL 593 LEU 594 THR 595 SER 596 ILE 597 ASP 598 CYS 599 PRO 600 THR 601 CYS 602 GLY 603 ARG 604 LYS 605 MET 606 GLY 607 ILE 608 ARG 609 THR 610 ALA 611 SER 612 THR 613 GLY 614 VAL 615 PHE 616 LEU 617 GLY 618 CYS 619 SER 620 GLY 621 TYR 622 ALA 623 LEU 624 PRO 625 PRO 626 LYS 627 GLU 628 ARG 629 CYS 630 LYS 631 THR 632 THR 633 ILE 634 ASN 635 LEU 636 VAL 637 PRO 638 GLU 639 ASN 640 GLU 641 VAL 642 LEU 643 ASN 644 VAL 645 LEU 646 GLU 647 GLY 648 GLU 649 ASP 650 ALA 651 GLU 652 THR 653 ASN 654 ALA 655 LEU 656 ARG 657 ALA 658 LYS 659 ARG 660 ARG 661 CYS 662 PRO 663 LYS 664 CYS 665 GLY 666 THR 667 ALA 668 MET 669 ASP 670 SER 671 TYR 672 LEU 673 ILE 674 ASP 675 PRO 676 LYS 677 ARG 678 LYS 679 LEU 680 HIS 681 VAL 682 CYS 683 GLY 684 ASN 685 ASN 686 PRO 687 THR 688 CYS 689 ASP 690 GLY 691 TYR 692 GLU 693 ILE 694 GLU 695 GLU 696 GLY 697 GLU 698 PHE 699 ARG 700 ILE 701 LYS 702 GLY 703 TYR 704 ASP 705 GLY 706 PRO 707 ILE 708 VAL 709 GLU 710 CYS 711 GLU 712 LYS 713 CYS 714 GLY 715 SER 716 GLU 717 MET 718 HIS 719 LEU 720 LYS 721 MET 722 GLY 723 ARG 724 PHE 725 GLY 726 LYS 727 TYR 728 MET 729 ALA 730 CYS 731 THR 732 ASN 733 GLU 734 GLU 735 CYS 736 LYS 737 ASN 738 THR 739 ARG 740 LYS 741 ILE 742 LEU 743 ARG 744 ASN 745 GLY 746 GLU 747 VAL 748 ALA 749 PRO 750 PRO 751 LYS 752 GLU 753 ASP 754 PRO 755 VAL 756 PRO 757 LEU 758 PRO 759 GLU 760 LEU 761 PRO 762 CYS 763 GLU 764 LYS 765 SER 766 ASP 767 ALA 768 TYR 769 PHE 770 VAL 771 LEU 772 ARG 773 ASP 774 GLY 775 ALA 776 ALA 777 GLY 778 VAL 779 PHE 780 LEU 781 ALA 782 ALA 783 ASN 784 THR 785 PHE 786 PRO 787 LYS 788 SER 789 ARG 790 GLU 791 THR 792 ARG 793 ALA 794 PRO 795 LEU 796 VAL 797 GLU 798 GLU 799 PHE 803 ARG 804 ASP 805 ARG 806 LEU 807 PRO 808 GLU 809 LYS 810 LEU 811 ARG 812 TYR 813 LEU 814 ALA 815 ASP 816 ALA 817 PRO 818 ASN 825 LYS 826 THR 827 MET 828 VAL 829 ARG 830 PHE 831 SER 832 ARG 833 LYS 834 THR 835 LYS 836 GLN 837 GLN 838 TYR 839 VAL 840 SER 841 SER 842 GLU 843 LYS 844 GLY 850 TRP 851 SER 852 ALA 853 PHE 854 TYR 855 VAL 856 ASP 857 GLY 858 LYS 859 TRP 860 VAL 861 GLU 862

Other macromolecules

Unit 2

DT 17 DA 18 DT 19 DG 20 DC 21 DG 22 DA 23 DT 24 DT 25 DT 26 DG 27 DG 28 DG 29

Ligands

Unit 3

ZN 1001 ZN 1002 ZN 1003 ZN 1004 SO4 1005 SO4 1006 SO4 1007 SO4 1008 GOL 1009