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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF R.NGOAVII RESTRICTION ENDONUCLEASE B3 D COGNATE DNA
Keywords RESTRICTION ENDONUCLEASE, B3 DOMAIN, PROTEIN-DNA COMPLEX, HY DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4RDM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RESTRICTION ENDONUCLEASE R.NGOVII  A 165 1343 0
2  Protein   RESTRICTION ENDONUCLEASE R.NGOVII  B 164 1284 0
3  Other macromolecule   DNA (5'-D(*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP '  C 15 301 0
4  Other macromolecule   DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP '  D 15 307 0
5  Other macromolecule   DNA (5'-D(*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP '  E 14 285 0
6  Other macromolecule   DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP '  F 15 307 0
7  Ligand   RESTRICTION ENDONUCLEASE R.NGOVII  A 1 0 5
8 Water     52 0 53
total       441 3827 58
Proteins
Unit 1 HIS180 LEU181 GLU182 ASN183 CYS184 LEU185 GLY186 VAL187 GLN188 LYS189 ILE190 ALA191 PRO192 GLU193 GLN194 ILE195 ARG196 GLN197 LEU198 PHE199 ALA200 GLN201 THR202 SER203 GLU204 TYR205 HIS206 PHE207 SER208 ILE209 PRO210 ALA211 LYS212 THR213 GLU214 GLU215 LYS216 SER217 ASN218 LEU219 ASN220 VAL221 PHE222 PHE223 GLY224 GLU225 GLY226 ARG227 ARG228 ASP229 LYS230 ARG231 GLY232 PHE233 VAL234 LYS235 PRO236 ARG237 PRO238 TRP239 TYR240 GLU241 VAL242 GLU243 LEU244 ILE245 VAL246 SER247 LYS248 ASP249 ILE250 THR251 SER252 GLN253 GLU254 GLY255 TYR256 PRO257 VAL258 LEU259 LYS260 SER261 PHE262 THR263 VAL264 ILE265 THR266 ASP267 ASP268 GLY269 TRP270 GLN271 PHE272 GLN273 CYS274 LYS275 THR276 SER277 GLY278 ASP279 TYR280 SER281 LYS282 ASN283 PHE284 ARG285 SER286 GLU287 ASN288 ASP289 LEU290 LYS291 THR292 LEU293 GLY294 LYS295 TRP296 ILE297 LYS298 GLY299 ARG300 LEU301 GLU302 SER303 HIS304 GLY305 CYS306 LEU307 GLN308 ASN309 ASN310 GLU311 LYS312 ILE313 THR314 HIS315 GLU316 THR317 LEU318 ARG319 GLU320 TYR321 GLY322 ASN323 ASP324 HIS325 PHE326 GLU327 LEU328 ARG329 SER330 THR331 ASP332 ASN333 PRO334 ASP335 VAL336 TRP337 LEU338 LEU339 SER340 PHE341 LYS342 GLY343 LYS344
Unit 2 LEU181 GLU182 ASN183 CYS184 LEU185 GLY186 VAL187 GLN188 LYS189 ILE190 ALA191 PRO192 GLU193 GLN194 ILE195 ARG196 GLN197 LEU198 PHE199 ALA200 GLN201 THR202 SER203 GLU204 TYR205 HIS206 PHE207 SER208 ILE209 PRO210 ALA211 LYS212 THR213 GLU214 GLU215 LYS216 SER217 ASN218 LEU219 ASN220 VAL221 PHE222 PHE223 GLY224 GLU225 GLY226 ARG227 ARG228 ASP229 LYS230 ARG231 GLY232 PHE233 VAL234 LYS235 PRO236 ARG237 PRO238 TRP239 TYR240 GLU241 VAL242 GLU243 LEU244 ILE245 VAL246 SER247 LYS248 ASP249 ILE250 THR251 SER252 GLN253 GLU254 GLY255 TYR256 PRO257 VAL258 LEU259 LYS260 SER261 PHE262 THR263 VAL264 ILE265 THR266 ASP267 ASP268 GLY269 TRP270 GLN271 PHE272 GLN273 CYS274 LYS275 THR276 SER277 GLY278 ASP279 TYR280 SER281 LYS282 ASN283 PHE284 ARG285 SER286 GLU287 ASN288 ASP289 LEU290 LYS291 THR292 LEU293 GLY294 LYS295 TRP296 ILE297 LYS298 GLY299 ARG300 LEU301 GLU302 SER303 HIS304 GLY305 CYS306 LEU307 GLN308 ASN309 ASN310 GLU311 LYS312 ILE313 THR314 HIS315 GLU316 THR317 LEU318 ARG319 GLU320 TYR321 GLY322 ASN323 ASP324 HIS325 PHE326 GLU327 LEU328 ARG329 SER330 THR331 ASP332 ASN333 PRO334 ASP335 VAL336 TRP337 LEU338 LEU339 SER340 PHE341 LYS342 GLY343 LYS344
Other macromolecules
Unit 3 DC2 DC3 DT4 DA5 DA6 DG7 DC8 DG9 DG10 DC11 DA12 DA13 DT14 DC15 DC16
Unit 4 DG17 DG18 DG19 DA20 DT21 DT22 DG23 DC24 DC25 DG26 DC27 DC28 DT29 DA30 DG31
Unit 5 DC3 DT4 DA5 DA6 DG7 DC8 DG9 DG10 DC11 DA12 DA13 DT14 DC15 DC16
Unit 6 DG17 DG18 DG19 DA20 DT21 DT22 DG23 DC24 DC25 DG26 DC27 DC28 DT29 DA30 DG31
Ligands
Unit 7 SO4401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany