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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A QUINONPROTEIN ALCOHOL DEHYDROGENASE-L PROTEIN (BT1487) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 RESOLUTION
Keywords TWO DOMAIN PROTEIN, IMMUNOGLOBULIN-LIKE BETA-SANDWICH FOLD, FAMILY, DUF5015, 7-BLADED BETA-PROPELLER, YVTN REPEAT FAMIL STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4R5O     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN  A 426 3288 16
2  Protein   QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN  B 416 3214 16
3  Protein   QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN  C 416 3179 16
4  Protein   QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN  D 425 3223 16
5  Ligand   QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN  A 10 0 46
6  Ligand   QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN  B 8 0 54
7  Ligand   QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN  C 4 0 31
8  Ligand   QUINONPROTEIN ALCOHOL DEHYDROGENASE-LIKE PROTEIN  D 1 0 7
9 Water     344 0 344
total       2050 12904 546
Proteins
Unit 1 ASP23 ASP24 CYS25 GLU26 ASP27 LEU28 HIS29 LEU30 GLY31 ASN32 LEU33 ALA34 HIS35 TYR36 PRO37 ASN38 VAL39 LEU40 LYS41 GLY42 THR43 PHE44 PRO45 THR46 GLU47 SER48 GLN49 VAL50 LEU51 GLU52 LEU53 GLY54 GLU55 THR56 LEU57 GLU58 ILE59 THR60 PRO61 GLU62 LEU63 LEU64 ASN65 PRO66 GLU67 GLY68 ALA69 THR70 TYR71 SER72 TRP73 LEU74 VAL75 ASN76 GLY77 LYS78 GLU79 TYR80 SER81 THR82 GLU83 PRO84 THR85 PHE86 SER87 TYR88 LYS89 ILE90 ASP91 ASN92 PRO93 CYS94 ARG95 ALA96 ASP97 LEU98 SER99 CYS100 ILE101 ILE102 LYS103 ASN104 LYS105 TYR106 GLY107 LYS108 VAL109 GLU110 MSE111 SER112 THR113 SER114 PHE115 SER116 SER117 ASN118 HIS119 ASN120 PHE121 SER122 LYS123 GLY124 PHE125 PHE126 TYR127 VAL128 ALA129 ASP130 GLY131 THR132 PHE133 ASN134 PHE135 TYR136 ASP137 THR138 GLU139 LYS140 LYS141 THR142 ALA143 TYR144 GLN145 ASP146 CYS147 TYR148 ALA149 SER150 LEU151 ASN152 ALA153 GLY154 LYS155 THR156 LEU157 GLY158 ILE159 GLY160 ASN161 TYR162 ASP163 SER164 ALA165 ASN166 ILE167 ILE168 HIS169 SER170 ASN171 GLY172 LYS173 PHE174 TYR175 LEU176 LEU177 VAL178 GLY179 THR180 SER181 THR182 SER183 ASN184 ARG185 ASP186 HIS187 PHE188 TYR189 ILE190 VAL191 ASP192 ALA193 LYS194 THR195 LEU196 TYR197 TYR198 GLU199 ASN200 SER201 ALA202 VAL203 VAL204 GLY205 ALA206 ASN207 LEU208 SER209 GLY210 LEU211 THR212 ILE213 LEU214 ASN215 GLU216 GLN217 TYR218 GLY219 LEU220 VAL221 THR222 GLY223 ASP224 GLY225 ILE226 ARG227 ARG228 ILE229 ASP230 LEU231 LYS232 SER233 LEU234 ASN235 ASN236 VAL237 ARG238 ILE239 LYS240 ASN241 GLU242 ARG243 LEU244 LEU245 CYS246 PHE247 TYR248 ASN249 SER250 ILE251 ILE252 TYR253 ASN254 GLY255 LYS256 VAL257 LEU258 SER259 ASN260 ASP261 THR262 TYR263 LYS264 ASP265 GLU266 SER267 LYS268 VAL269 LYS270 TYR271 TYR272 ASP273 VAL274 ASN275 GLU276 LEU277 ILE278 ALA279 ALA280 LYS281 GLU282 GLY283 GLU284 ALA285 PRO286 ALA287 VAL288 THR289 GLU290 LEU291 ASP292 ILE293 ILE294 GLN295 LYS296 GLN297 LYS298 ILE299 ASN300 PHE301 VAL302 LEU303 ALA304 LYS305 ASP306 GLY307 ASN308 VAL309 TYR310 THR311 LEU312 GLU313 SER314 ALA315 ASP316 ASN317 GLY318 CYS319 ASN320 ILE321 VAL322 LYS323 ILE324 LYS325 ASN326 ASP327 PHE328 THR329 LEU330 GLU331 LYS332 VAL333 PHE334 ALA335 ASN336 PHE337 GLN338 PRO339 ALA340 LYS341 GLY342 PRO343 TYR344 HIS345 SER346 SER347 PRO348 THR349 ILE350 GLY351 MSE352 VAL353 ALA354 SER355 GLU356 THR357 GLU358 ASN359 ILE360 ILE361 TYR362 LEU363 VAL364 SER365 THR366 ASP367 GLY368 ALA369 ILE370 TYR371 LYS372 TYR373 ILE374 LEU375 GLY376 ASP377 SER378 ASP379 SER380 LEU381 LYS382 ALA383 PRO384 PHE385 ILE386 ALA387 ALA388 GLU389 SER390 GLY391 VAL392 SER393 ILE394 THR395 ALA396 PRO397 LEU398 GLN399 LEU400 ASN401 GLN402 GLN403 SER404 GLY405 GLU406 LEU407 TYR408 VAL409 THR410 TYR411 THR412 GLU413 GLU414 ARG415 LYS416 ASP417 GLU418 SER419 LYS420 ILE421 VAL422 VAL423 TYR424 SER425 LYS426 ASP427 GLY428 LYS429 VAL430 LEU431 HIS432 THR433 VAL434 ASP435 CYS436 GLY437 GLU438 SER439 VAL440 PRO441 SER442 GLN443 ILE444 LEU445 PHE446 ASN447 ASN448
Unit 2 LEU33 ALA34 HIS35 TYR36 PRO37 ASN38 VAL39 LEU40 LYS41 GLY42 THR43 PHE44 PRO45 THR46 GLU47 SER48 GLN49 VAL50 LEU51 GLU52 LEU53 GLY54 GLU55 THR56 LEU57 GLU58 ILE59 THR60 PRO61 GLU62 LEU63 LEU64 ASN65 PRO66 GLU67 GLY68 ALA69 THR70 TYR71 SER72 TRP73 LEU74 VAL75 ASN76 GLY77 LYS78 GLU79 TYR80 SER81 THR82 GLU83 PRO84 THR85 PHE86 SER87 TYR88 LYS89 ILE90 ASP91 ASN92 PRO93 CYS94 ARG95 ALA96 ASP97 LEU98 SER99 CYS100 ILE101 ILE102 LYS103 ASN104 LYS105 TYR106 GLY107 LYS108 VAL109 GLU110 MSE111 SER112 THR113 SER114 PHE115 SER116 SER117 ASN118 HIS119 ASN120 PHE121 SER122 LYS123 GLY124 PHE125 PHE126 TYR127 VAL128 ALA129 ASP130 GLY131 THR132 PHE133 ASN134 PHE135 TYR136 ASP137 THR138 GLU139 LYS140 LYS141 THR142 ALA143 TYR144 GLN145 ASP146 CYS147 TYR148 ALA149 SER150 LEU151 ASN152 ALA153 GLY154 LYS155 THR156 LEU157 GLY158 ILE159 GLY160 ASN161 TYR162 ASP163 SER164 ALA165 ASN166 ILE167 ILE168 HIS169 SER170 ASN171 GLY172 LYS173 PHE174 TYR175 LEU176 LEU177 VAL178 GLY179 THR180 SER181 THR182 SER183 ASN184 ARG185 ASP186 HIS187 PHE188 TYR189 ILE190 VAL191 ASP192 ALA193 LYS194 THR195 LEU196 TYR197 TYR198 GLU199 ASN200 SER201 ALA202 VAL203 VAL204 GLY205 ALA206 ASN207 LEU208 SER209 GLY210 LEU211 THR212 ILE213 LEU214 ASN215 GLU216 GLN217 TYR218 GLY219 LEU220 VAL221 THR222 GLY223 ASP224 GLY225 ILE226 ARG227 ARG228 ILE229 ASP230 LEU231 LYS232 SER233 LEU234 ASN235 ASN236 VAL237 ARG238 ILE239 LYS240 ASN241 GLU242 ARG243 LEU244 LEU245 CYS246 PHE247 TYR248 ASN249 SER250 ILE251 ILE252 TYR253 ASN254 GLY255 LYS256 VAL257 LEU258 SER259 ASN260 ASP261 THR262 TYR263 LYS264 ASP265 GLU266 SER267 LYS268 VAL269 LYS270 TYR271 TYR272 ASP273 VAL274 ASN275 GLU276 LEU277 ILE278 ALA279 ALA280 LYS281 GLU282 GLY283 GLU284 ALA285 PRO286 ALA287 VAL288 THR289 GLU290 LEU291 ASP292 ILE293 ILE294 GLN295 LYS296 GLN297 LYS298 ILE299 ASN300 PHE301 VAL302 LEU303 ALA304 LYS305 ASP306 GLY307 ASN308 VAL309 TYR310 THR311 LEU312 GLU313 SER314 ALA315 ASP316 ASN317 GLY318 CYS319 ASN320 ILE321 VAL322 LYS323 ILE324 LYS325 ASN326 ASP327 PHE328 THR329 LEU330 GLU331 LYS332 VAL333 PHE334 ALA335 ASN336 PHE337 GLN338 PRO339 ALA340 LYS341 GLY342 PRO343 TYR344 HIS345 SER346 SER347 PRO348 THR349 ILE350 GLY351 MSE352 VAL353 ALA354 SER355 GLU356 THR357 GLU358 ASN359 ILE360 ILE361 TYR362 LEU363 VAL364 SER365 THR366 ASP367 GLY368 ALA369 ILE370 TYR371 LYS372 TYR373 ILE374 LEU375 GLY376 ASP377 SER378 ASP379 SER380 LEU381 LYS382 ALA383 PRO384 PHE385 ILE386 ALA387 ALA388 GLU389 SER390 GLY391 VAL392 SER393 ILE394 THR395 ALA396 PRO397 LEU398 GLN399 LEU400 ASN401 GLN402 GLN403 SER404 GLY405 GLU406 LEU407 TYR408 VAL409 THR410 TYR411 THR412 GLU413 GLU414 ARG415 LYS416 ASP417 GLU418 SER419 LYS420 ILE421 VAL422 VAL423 TYR424 SER425 LYS426 ASP427 GLY428 LYS429 VAL430 LEU431 HIS432 THR433 VAL434 ASP435 CYS436 GLY437 GLU438 SER439 VAL440 PRO441 SER442 GLN443 ILE444 LEU445 PHE446 ASN447 ASN448
Unit 3 LEU33 ALA34 HIS35 TYR36 PRO37 ASN38 VAL39 LEU40 LYS41 GLY42 THR43 PHE44 PRO45 THR46 GLU47 SER48 GLN49 VAL50 LEU51 GLU52 LEU53 GLY54 GLU55 THR56 LEU57 GLU58 ILE59 THR60 PRO61 GLU62 LEU63 LEU64 ASN65 PRO66 GLU67 GLY68 ALA69 THR70 TYR71 SER72 TRP73 LEU74 VAL75 ASN76 GLY77 LYS78 GLU79 TYR80 SER81 THR82 GLU83 PRO84 THR85 PHE86 SER87 TYR88 LYS89 ILE90 ASP91 ASN92 PRO93 CYS94 ARG95 ALA96 ASP97 LEU98 SER99 CYS100 ILE101 ILE102 LYS103 ASN104 LYS105 TYR106 GLY107 LYS108 VAL109 GLU110 MSE111 SER112 THR113 SER114 PHE115 SER116 SER117 ASN118 HIS119 ASN120 PHE121 SER122 LYS123 GLY124 PHE125 PHE126 TYR127 VAL128 ALA129 ASP130 GLY131 THR132 PHE133 ASN134 PHE135 TYR136 ASP137 THR138 GLU139 LYS140 LYS141 THR142 ALA143 TYR144 GLN145 ASP146 CYS147 TYR148 ALA149 SER150 LEU151 ASN152 ALA153 GLY154 LYS155 THR156 LEU157 GLY158 ILE159 GLY160 ASN161 TYR162 ASP163 SER164 ALA165 ASN166 ILE167 ILE168 HIS169 SER170 ASN171 GLY172 LYS173 PHE174 TYR175 LEU176 LEU177 VAL178 GLY179 THR180 SER181 THR182 SER183 ASN184 ARG185 ASP186 HIS187 PHE188 TYR189 ILE190 VAL191 ASP192 ALA193 LYS194 THR195 LEU196 TYR197 TYR198 GLU199 ASN200 SER201 ALA202 VAL203 VAL204 GLY205 ALA206 ASN207 LEU208 SER209 GLY210 LEU211 THR212 ILE213 LEU214 ASN215 GLU216 GLN217 TYR218 GLY219 LEU220 VAL221 THR222 GLY223 ASP224 GLY225 ILE226 ARG227 ARG228 ILE229 ASP230 LEU231 LYS232 SER233 LEU234 ASN235 ASN236 VAL237 ARG238 ILE239 LYS240 ASN241 GLU242 ARG243 LEU244 LEU245 CYS246 PHE247 TYR248 ASN249 SER250 ILE251 ILE252 TYR253 ASN254 GLY255 LYS256 VAL257 LEU258 SER259 ASN260 ASP261 THR262 TYR263 LYS264 ASP265 GLU266 SER267 LYS268 VAL269 LYS270 TYR271 TYR272 ASP273 VAL274 ASN275 GLU276 LEU277 ILE278 ALA279 ALA280 LYS281 GLU282 GLY283 GLU284 ALA285 PRO286 ALA287 VAL288 THR289 GLU290 LEU291 ASP292 ILE293 ILE294 GLN295 LYS296 GLN297 LYS298 ILE299 ASN300 PHE301 VAL302 LEU303 ALA304 LYS305 ASP306 GLY307 ASN308 VAL309 TYR310 THR311 LEU312 GLU313 SER314 ALA315 ASP316 ASN317 GLY318 CYS319 ASN320 ILE321 VAL322 LYS323 ILE324 LYS325 ASN326 ASP327 PHE328 THR329 LEU330 GLU331 LYS332 VAL333 PHE334 ALA335 ASN336 PHE337 GLN338 PRO339 ALA340 LYS341 GLY342 PRO343 TYR344 HIS345 SER346 SER347 PRO348 THR349 ILE350 GLY351 MSE352 VAL353 ALA354 SER355 GLU356 THR357 GLU358 ASN359 ILE360 ILE361 TYR362 LEU363 VAL364 SER365 THR366 ASP367 GLY368 ALA369 ILE370 TYR371 LYS372 TYR373 ILE374 LEU375 GLY376 ASP377 SER378 ASP379 SER380 LEU381 LYS382 ALA383 PRO384 PHE385 ILE386 ALA387 ALA388 GLU389 SER390 GLY391 VAL392 SER393 ILE394 THR395 ALA396 PRO397 LEU398 GLN399 LEU400 ASN401 GLN402 GLN403 SER404 GLY405 GLU406 LEU407 TYR408 VAL409 THR410 TYR411 THR412 GLU413 GLU414 ARG415 LYS416 ASP417 GLU418 SER419 LYS420 ILE421 VAL422 VAL423 TYR424 SER425 LYS426 ASP427 GLY428 LYS429 VAL430 LEU431 HIS432 THR433 VAL434 ASP435 CYS436 GLY437 GLU438 SER439 VAL440 PRO441 SER442 GLN443 ILE444 LEU445 PHE446 ASN447 ASN448
Unit 4 ASP24 CYS25 GLU26 ASP27 LEU28 HIS29 LEU30 GLY31 ASN32 LEU33 ALA34 HIS35 TYR36 PRO37 ASN38 VAL39 LEU40 LYS41 GLY42 THR43 PHE44 PRO45 THR46 GLU47 SER48 GLN49 VAL50 LEU51 GLU52 LEU53 GLY54 GLU55 THR56 LEU57 GLU58 ILE59 THR60 PRO61 GLU62 LEU63 LEU64 ASN65 PRO66 GLU67 GLY68 ALA69 THR70 TYR71 SER72 TRP73 LEU74 VAL75 ASN76 GLY77 LYS78 GLU79 TYR80 SER81 THR82 GLU83 PRO84 THR85 PHE86 SER87 TYR88 LYS89 ILE90 ASP91 ASN92 PRO93 CYS94 ARG95 ALA96 ASP97 LEU98 SER99 CYS100 ILE101 ILE102 LYS103 ASN104 LYS105 TYR106 GLY107 LYS108 VAL109 GLU110 MSE111 SER112 THR113 SER114 PHE115 SER116 SER117 ASN118 HIS119 ASN120 PHE121 SER122 LYS123 GLY124 PHE125 PHE126 TYR127 VAL128 ALA129 ASP130 GLY131 THR132 PHE133 ASN134 PHE135 TYR136 ASP137 THR138 GLU139 LYS140 LYS141 THR142 ALA143 TYR144 GLN145 ASP146 CYS147 TYR148 ALA149 SER150 LEU151 ASN152 ALA153 GLY154 LYS155 THR156 LEU157 GLY158 ILE159 GLY160 ASN161 TYR162 ASP163 SER164 ALA165 ASN166 ILE167 ILE168 HIS169 SER170 ASN171 GLY172 LYS173 PHE174 TYR175 LEU176 LEU177 VAL178 GLY179 THR180 SER181 THR182 SER183 ASN184 ARG185 ASP186 HIS187 PHE188 TYR189 ILE190 VAL191 ASP192 ALA193 LYS194 THR195 LEU196 TYR197 TYR198 GLU199 ASN200 SER201 ALA202 VAL203 VAL204 GLY205 ALA206 ASN207 LEU208 SER209 GLY210 LEU211 THR212 ILE213 LEU214 ASN215 GLU216 GLN217 TYR218 GLY219 LEU220 VAL221 THR222 GLY223 ASP224 GLY225 ILE226 ARG227 ARG228 ILE229 ASP230 LEU231 LYS232 SER233 LEU234 ASN235 ASN236 VAL237 ARG238 ILE239 LYS240 ASN241 GLU242 ARG243 LEU244 LEU245 CYS246 PHE247 TYR248 ASN249 SER250 ILE251 ILE252 TYR253 ASN254 GLY255 LYS256 VAL257 LEU258 SER259 ASN260 ASP261 THR262 TYR263 LYS264 ASP265 GLU266 SER267 LYS268 VAL269 LYS270 TYR271 TYR272 ASP273 VAL274 ASN275 GLU276 LEU277 ILE278 ALA279 ALA280 LYS281 GLU282 GLY283 GLU284 ALA285 PRO286 ALA287 VAL288 THR289 GLU290 LEU291 ASP292 ILE293 ILE294 GLN295 LYS296 GLN297 LYS298 ILE299 ASN300 PHE301 VAL302 LEU303 ALA304 LYS305 ASP306 GLY307 ASN308 VAL309 TYR310 THR311 LEU312 GLU313 SER314 ALA315 ASP316 ASN317 GLY318 CYS319 ASN320 ILE321 VAL322 LYS323 ILE324 LYS325 ASN326 ASP327 PHE328 THR329 LEU330 GLU331 LYS332 VAL333 PHE334 ALA335 ASN336 PHE337 GLN338 PRO339 ALA340 LYS341 GLY342 PRO343 TYR344 HIS345 SER346 SER347 PRO348 THR349 ILE350 GLY351 MSE352 VAL353 ALA354 SER355 GLU356 THR357 GLU358 ASN359 ILE360 ILE361 TYR362 LEU363 VAL364 SER365 THR366 ASP367 GLY368 ALA369 ILE370 TYR371 LYS372 TYR373 ILE374 LEU375 GLY376 ASP377 SER378 ASP379 SER380 LEU381 LYS382 ALA383 PRO384 PHE385 ILE386 ALA387 ALA388 GLU389 SER390 GLY391 VAL392 SER393 ILE394 THR395 ALA396 PRO397 LEU398 GLN399 LEU400 ASN401 GLN402 GLN403 SER404 GLY405 GLU406 LEU407 TYR408 VAL409 THR410 TYR411 THR412 GLU413 GLU414 ARG415 LYS416 ASP417 GLU418 SER419 LYS420 ILE421 VAL422 VAL423 TYR424 SER425 LYS426 ASP427 GLY428 LYS429 VAL430 LEU431 HIS432 THR433 VAL434 ASP435 CYS436 GLY437 GLU438 SER439 VAL440 PRO441 SER442 GLN443 ILE444 LEU445 PHE446 ASN447 ASN448
Ligands
Unit 5 7PE501 7PE502 7PE503 ACT504 ACT505 CA506 CA507 CA508 CA509 CL510
Unit 6 7PE501 7PE502 7PE503 7PE504 7PE505 ACT506 ACT507 CA508
Unit 7 7PE501 7PE502 7PE503 CL504
Unit 8 7PE501
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany