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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF AN RNA COMPLEX
Keywords STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, RN PROTEIN-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4R3I     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   YTH DOMAIN-CONTAINING PROTEIN 1  A 164 1275 0
2  RNA    B 5 83 23
3  Ligand   YTH DOMAIN-CONTAINING PROTEIN 1  A 7 0 7
4 Water     89 0 89
total       265 1358 119

Proteins
Unit 1 GLY344 THR345 SER346 LYS347 LEU348 LYS349 TYR350 VAL351 LEU352 GLN353 ASP354 ALA355 ARG356 PHE357 PHE358 LEU359 ILE360 LYS361 SER362 ASN363 ASN364 HIS365 GLU366 ASN367 VAL368 SER369 LEU370 ALA371 LYS372 ALA373 LYS374 GLY375 VAL376 TRP377 SER378 THR379 LEU380 PRO381 VAL382 ASN383 GLU384 LYS385 LYS386 LEU387 ASN388 LEU389 ALA390 PHE391 ARG392 SER393 ALA394 ARG395 SER396 VAL397 ILE398 LEU399 ILE400 PHE401 SER402 VAL403 ARG404 GLU405 SER406 GLY407 LYS408 PHE409 GLN410 GLY411 PHE412 ALA413 ARG414 LEU415 SER416 SER417 GLU418 SER419 HIS420 HIS421 GLY422 GLY423 SER424 PRO425 ILE426 HIS427 TRP428 VAL429 LEU430 PRO431 ALA432 GLY433 MET434 SER435 ALA436 LYS437 MET438 LEU439 GLY440 GLY441 VAL442 PHE443 LYS444 ILE445 ASP446 TRP447 ILE448 CYS449 ARG450 ARG451 GLU452 LEU453 PRO454 PHE455 THR456 LYS457 SER458 ALA459 HIS460 LEU461 THR462 ASN463 PRO464 TRP465 ASN466 GLU467 HIS468 LYS469 PRO470 VAL471 LYS472 ILE473 GLY474 ARG475 ASP476 GLY477 GLN478 GLU479 ILE480 GLU481 LEU482 GLU483 CYS484 GLY485 THR486 GLN487 LEU488 CYS489 LEU490 LEU491 PHE492 PRO493 PRO494 ASP495 GLU496 SER497 ILE498 ASP499 LEU500 TYR501 GLN502 VAL503 ILE504 HIS505 LYS506 MET507

Nucleic acids
Unit 2 G1 G2 6MZ3 C4 U5

Ligands
Unit 3 UNX601 UNX602 UNX603 UNX604 UNX605 UNX606 UNX607

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany