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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE ALCANIVORAX BORKUMENSIS YDAH TRANSP REVEALS AN UNUSUAL TOPOLOGY
Keywords TRANSMEMBRANE PROTEIN, MEMBRANE PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4R0C     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ABGT PUTATIVE TRANSPORTER FAMILY  A 476 3510 0
2  Protein   ABGT PUTATIVE TRANSPORTER FAMILY  B 468 3455 0
3  Protein   ABGT PUTATIVE TRANSPORTER FAMILY  C 474 3491 0
4  Protein   ABGT PUTATIVE TRANSPORTER FAMILY  D 483 3567 0
5  Ligand   ABGT PUTATIVE TRANSPORTER FAMILY  A 6 0 98
6  Ligand   ABGT PUTATIVE TRANSPORTER FAMILY  B 1 0 1
7  Ligand   ABGT PUTATIVE TRANSPORTER FAMILY  C 5 0 72
8  Ligand   ABGT PUTATIVE TRANSPORTER FAMILY  D 2 0 21
9 Water     58 0 58
total       1973 14023 250
Proteins
Unit 1 ARG17 LEU18 PRO19 HIS20 PRO21 THR22 LEU23 LEU24 PHE25 VAL26 TRP27 PHE28 CYS29 LEU30 LEU31 LEU32 LEU33 PRO34 LEU35 THR36 ALA37 VAL38 LEU39 GLY40 ALA41 LEU42 ASP43 VAL44 THR45 ALA46 THR47 HIS48 PRO49 LEU50 THR51 ASP52 GLU53 THR54 ILE55 THR56 ALA57 HIS58 SER59 LEU60 LEU61 ASP62 ALA63 ASP64 GLY65 LEU66 ARG67 TYR68 LEU69 PHE70 THR71 THR72 LEU73 VAL74 GLY75 ASN76 PHE77 THR78 GLY79 PHE80 ALA81 PRO82 LEU83 GLY84 VAL85 VAL86 LEU87 VAL88 ALA89 MET90 LEU91 GLY92 LEU93 GLY94 VAL95 ALA96 GLU97 GLN98 SER99 GLY100 LEU101 LEU102 SER103 VAL104 SER105 LEU106 ALA107 SER108 LEU109 VAL110 ARG111 ARG112 SER113 SER114 GLY115 GLY116 ALA117 LEU118 VAL119 PHE120 THR121 VAL122 ALA123 PHE124 ALA125 GLY126 VAL127 LEU128 SER129 SER130 LEU131 THR132 VAL133 ASP134 ALA135 GLY136 TYR137 VAL138 VAL139 LEU140 ILE141 PRO142 LEU143 ALA144 GLY145 LEU146 VAL147 PHE148 GLN149 LEU150 ALA151 GLY152 ARG153 PRO154 PRO155 ILE156 ALA157 GLY158 ILE159 ALA160 THR161 ALA162 PHE163 ALA164 ALA165 VAL166 SER167 GLY168 GLY169 PHE170 SER171 ALA172 ASN173 LEU174 LEU175 VAL176 GLY177 PRO178 VAL179 ASP180 ALA181 THR182 LEU183 ALA184 GLY185 LEU186 SER187 THR188 GLU189 ALA190 ALA191 HIS192 ILE193 ILE194 ASP195 PRO196 ASP197 ARG198 THR199 VAL200 ALA201 ALA202 THR203 GLY204 ASN205 TYR206 TRP207 PHE208 ILE209 ILE210 ALA211 SER212 THR213 PHE214 LEU215 VAL216 THR217 GLY218 LEU219 VAL220 THR221 LEU222 ILE223 THR224 ARG225 THR226 LEU227 THR228 GLU229 PRO230 ARG231 LEU232 ALA233 HIS234 ALA235 ASN236 THR237 VAL238 ALA239 ASP240 ALA241 SER242 VAL243 ASP244 ALA245 PRO246 GLN247 ILE248 HIS249 SER250 ARG251 ALA252 MET253 LYS254 TRP255 THR256 GLY257 LEU258 THR259 LEU260 ALA261 ILE262 LEU263 LEU264 ALA265 GLY266 LEU267 ALA268 LEU269 LEU270 VAL271 LEU272 PRO273 ASN274 ASP275 ALA276 PRO277 LEU278 ARG279 HIS280 PRO281 ASP282 THR283 GLY284 SER285 VAL286 LEU287 GLY288 SER289 PRO290 PHE291 ILE292 HIS293 GLY294 LEU295 VAL296 VAL297 ILE298 VAL299 ALA300 LEU301 ILE302 ALA303 GLY304 ILE305 CYS306 GLY307 ALA308 VAL309 TYR310 GLY311 ARG312 VAL313 SER314 GLY315 GLN316 PHE317 ARG318 ASN319 SER320 GLY321 ALA322 VAL323 ILE324 THR325 ALA326 MET327 GLU328 VAL329 THR330 MET331 ALA332 SER333 MET334 ALA335 GLY336 TYR337 LEU338 VAL339 LEU340 MET341 PHE342 PHE343 ALA344 ALA345 GLN346 PHE347 VAL348 ALA349 TRP350 PHE351 ASN352 TYR353 SER354 GLN355 LEU356 GLY357 LEU358 LEU359 LEU360 ALA361 VAL362 LYS363 GLY364 ALA365 ALA366 TRP367 LEU368 GLY369 ALA370 LEU371 THR372 VAL373 PRO374 LYS375 VAL376 VAL377 LEU378 LEU379 LEU380 LEU381 PHE382 VAL383 VAL384 LEU385 THR386 ALA387 LEU388 ILE389 ASN390 LEU391 MET392 ILE393 GLY394 SER395 ALA396 SER397 ALA398 LYS399 TRP400 SER401 ILE402 LEU403 ALA404 PRO405 VAL406 PHE407 ILE408 PRO409 MET410 LEU411 MET412 LEU413 LEU414 GLY415 ILE416 SER417 PRO418 GLU419 ALA420 SER421 GLN422 ALA423 ALA424 TYR425 ARG426 VAL427 GLY428 ASP429 SER430 SER431 THR432 ASN433 ILE434 ILE435 THR436 PRO437 LEU438 MET439 PRO440 TYR441 PHE442 VAL443 LEU444 VAL445 LEU446 GLY447 PHE448 ALA449 ARG450 ARG451 TYR452 GLN453 PRO454 GLU455 THR456 GLY457 ILE458 GLY459 THR460 LEU461 ILE462 ALA463 LEU464 MET465 LEU466 PRO467 TYR468 SER469 LEU470 THR471 LEU472 LEU473 LEU474 GLY475 TRP476 SER477 VAL478 LEU479 LEU480 GLY481 VAL482 TRP483 ILE484 GLY485 PHE486 GLY487 TRP488 PRO489 LEU490 GLY491 PRO492
Unit 2 PRO19 HIS20 PRO21 THR22 LEU23 LEU24 PHE25 VAL26 TRP27 PHE28 CYS29 LEU30 LEU31 LEU32 LEU33 PRO34 LEU35 THR36 ALA37 VAL38 LEU39 GLY40 ALA41 LEU42 ASP43 VAL44 THR45 ALA46 THR47 HIS48 PRO49 LEU50 THR51 ASP52 GLU53 THR54 ILE55 THR56 ALA57 HIS58 SER59 LEU60 LEU61 ASP62 ALA63 ASP64 GLY65 LEU66 ARG67 TYR68 LEU69 PHE70 THR71 THR72 LEU73 VAL74 GLY75 ASN76 PHE77 THR78 GLY79 PHE80 ALA81 PRO82 LEU83 GLY84 VAL85 VAL86 LEU87 VAL88 ALA89 MET90 LEU91 GLY92 LEU93 GLY94 VAL95 ALA96 GLU97 GLN98 SER99 GLY100 LEU101 LEU102 SER103 VAL104 SER105 LEU106 ALA107 SER108 LEU109 VAL110 ARG111 LEU118 VAL119 PHE120 THR121 VAL122 ALA123 PHE124 ALA125 GLY126 VAL127 LEU128 SER129 SER130 LEU131 THR132 VAL133 ASP134 ALA135 GLY136 TYR137 VAL138 VAL139 LEU140 ILE141 PRO142 LEU143 ALA144 GLY145 LEU146 VAL147 PHE148 GLN149 LEU150 ALA151 GLY152 ARG153 PRO154 PRO155 ILE156 ALA157 GLY158 ILE159 ALA160 THR161 ALA162 PHE163 ALA164 ALA165 VAL166 SER167 GLY168 GLY169 PHE170 SER171 ALA172 ASN173 LEU174 LEU175 VAL176 GLY177 PRO178 VAL179 ASP180 ALA181 THR182 LEU183 ALA184 GLY185 LEU186 SER187 THR188 GLU189 ALA190 ALA191 HIS192 ILE193 ILE194 ASP195 PRO196 ASP197 ARG198 THR199 VAL200 ALA201 ALA202 THR203 GLY204 ASN205 TYR206 TRP207 PHE208 ILE209 ILE210 ALA211 SER212 THR213 PHE214 LEU215 VAL216 THR217 GLY218 LEU219 VAL220 THR221 LEU222 ILE223 THR224 ARG225 THR226 LEU227 THR228 GLU229 PRO230 ARG231 LEU232 ALA233 HIS234 ALA235 ASN236 THR237 VAL238 ALA239 ASP240 ALA241 SER242 VAL243 ASP244 ALA245 PRO246 GLN247 ILE248 HIS249 SER250 ARG251 ALA252 MET253 LYS254 TRP255 THR256 GLY257 LEU258 THR259 LEU260 ALA261 ILE262 LEU263 LEU264 ALA265 GLY266 LEU267 ALA268 LEU269 LEU270 VAL271 LEU272 PRO273 ASN274 ASP275 ALA276 PRO277 LEU278 ARG279 HIS280 PRO281 ASP282 THR283 GLY284 SER285 VAL286 LEU287 GLY288 SER289 PRO290 PHE291 ILE292 HIS293 GLY294 LEU295 VAL296 VAL297 ILE298 VAL299 ALA300 LEU301 ILE302 ALA303 GLY304 ILE305 CYS306 GLY307 ALA308 VAL309 TYR310 GLY311 ARG312 VAL313 SER314 GLY315 GLN316 PHE317 ARG318 ASN319 SER320 GLY321 ALA322 VAL323 ILE324 THR325 ALA326 MET327 GLU328 VAL329 THR330 MET331 ALA332 SER333 MET334 ALA335 GLY336 TYR337 LEU338 VAL339 LEU340 MET341 PHE342 PHE343 ALA344 ALA345 GLN346 PHE347 VAL348 ALA349 TRP350 PHE351 ASN352 TYR353 SER354 GLN355 LEU356 GLY357 LEU358 LEU359 LEU360 ALA361 VAL362 LYS363 GLY364 ALA365 ALA366 TRP367 LEU368 GLY369 ALA370 LEU371 THR372 VAL373 PRO374 LYS375 VAL376 VAL377 LEU378 LEU379 LEU380 LEU381 PHE382 VAL383 VAL384 LEU385 THR386 ALA387 LEU388 ILE389 ASN390 LEU391 MET392 ILE393 GLY394 SER395 ALA396 SER397 ALA398 LYS399 TRP400 SER401 ILE402 LEU403 ALA404 PRO405 VAL406 PHE407 ILE408 PRO409 MET410 LEU411 MET412 LEU413 LEU414 GLY415 ILE416 SER417 PRO418 GLU419 ALA420 SER421 GLN422 ALA423 ALA424 TYR425 ARG426 VAL427 GLY428 ASP429 SER430 SER431 THR432 ASN433 ILE434 ILE435 THR436 PRO437 LEU438 MET439 PRO440 TYR441 PHE442 VAL443 LEU444 VAL445 LEU446 GLY447 PHE448 ALA449 ARG450 ARG451 TYR452 GLN453 PRO454 GLU455 THR456 GLY457 ILE458 GLY459 THR460 LEU461 ILE462 ALA463 LEU464 MET465 LEU466 PRO467 TYR468 SER469 LEU470 THR471 LEU472 LEU473 LEU474 GLY475 TRP476 SER477 VAL478 LEU479 LEU480 GLY481 VAL482 TRP483 ILE484 GLY485 PHE486 GLY487 TRP488 PRO489 LEU490 GLY491 PRO492
Unit 3 PRO19 HIS20 PRO21 THR22 LEU23 LEU24 PHE25 VAL26 TRP27 PHE28 CYS29 LEU30 LEU31 LEU32 LEU33 PRO34 LEU35 THR36 ALA37 VAL38 LEU39 GLY40 ALA41 LEU42 ASP43 VAL44 THR45 ALA46 THR47 HIS48 PRO49 LEU50 THR51 ASP52 GLU53 THR54 ILE55 THR56 ALA57 HIS58 SER59 LEU60 LEU61 ASP62 ALA63 ASP64 GLY65 LEU66 ARG67 TYR68 LEU69 PHE70 THR71 THR72 LEU73 VAL74 GLY75 ASN76 PHE77 THR78 GLY79 PHE80 ALA81 PRO82 LEU83 GLY84 VAL85 VAL86 LEU87 VAL88 ALA89 MET90 LEU91 GLY92 LEU93 GLY94 VAL95 ALA96 GLU97 GLN98 SER99 GLY100 LEU101 LEU102 SER103 VAL104 SER105 LEU106 ALA107 SER108 LEU109 VAL110 ARG111 ARG112 SER113 SER114 GLY115 GLY116 ALA117 LEU118 VAL119 PHE120 THR121 VAL122 ALA123 PHE124 ALA125 GLY126 VAL127 LEU128 SER129 SER130 LEU131 THR132 VAL133 ASP134 ALA135 GLY136 TYR137 VAL138 VAL139 LEU140 ILE141 PRO142 LEU143 ALA144 GLY145 LEU146 VAL147 PHE148 GLN149 LEU150 ALA151 GLY152 ARG153 PRO154 PRO155 ILE156 ALA157 GLY158 ILE159 ALA160 THR161 ALA162 PHE163 ALA164 ALA165 VAL166 SER167 GLY168 GLY169 PHE170 SER171 ALA172 ASN173 LEU174 LEU175 VAL176 GLY177 PRO178 VAL179 ASP180 ALA181 THR182 LEU183 ALA184 GLY185 LEU186 SER187 THR188 GLU189 ALA190 ALA191 HIS192 ILE193 ILE194 ASP195 PRO196 ASP197 ARG198 THR199 VAL200 ALA201 ALA202 THR203 GLY204 ASN205 TYR206 TRP207 PHE208 ILE209 ILE210 ALA211 SER212 THR213 PHE214 LEU215 VAL216 THR217 GLY218 LEU219 VAL220 THR221 LEU222 ILE223 THR224 ARG225 THR226 LEU227 THR228 GLU229 PRO230 ARG231 LEU232 ALA233 HIS234 ALA235 ASN236 THR237 VAL238 ALA239 ASP240 ALA241 SER242 VAL243 ASP244 ALA245 PRO246 GLN247 ILE248 HIS249 SER250 ARG251 ALA252 MET253 LYS254 TRP255 THR256 GLY257 LEU258 THR259 LEU260 ALA261 ILE262 LEU263 LEU264 ALA265 GLY266 LEU267 ALA268 LEU269 LEU270 VAL271 LEU272 PRO273 ASN274 ASP275 ALA276 PRO277 LEU278 ARG279 HIS280 PRO281 ASP282 THR283 GLY284 SER285 VAL286 LEU287 GLY288 SER289 PRO290 PHE291 ILE292 HIS293 GLY294 LEU295 VAL296 VAL297 ILE298 VAL299 ALA300 LEU301 ILE302 ALA303 GLY304 ILE305 CYS306 GLY307 ALA308 VAL309 TYR310 GLY311 ARG312 VAL313 SER314 GLY315 GLN316 PHE317 ARG318 ASN319 SER320 GLY321 ALA322 VAL323 ILE324 THR325 ALA326 MET327 GLU328 VAL329 THR330 MET331 ALA332 SER333 MET334 ALA335 GLY336 TYR337 LEU338 VAL339 LEU340 MET341 PHE342 PHE343 ALA344 ALA345 GLN346 PHE347 VAL348 ALA349 TRP350 PHE351 ASN352 TYR353 SER354 GLN355 LEU356 GLY357 LEU358 LEU359 LEU360 ALA361 VAL362 LYS363 GLY364 ALA365 ALA366 TRP367 LEU368 GLY369 ALA370 LEU371 THR372 VAL373 PRO374 LYS375 VAL376 VAL377 LEU378 LEU379 LEU380 LEU381 PHE382 VAL383 VAL384 LEU385 THR386 ALA387 LEU388 ILE389 ASN390 LEU391 MET392 ILE393 GLY394 SER395 ALA396 SER397 ALA398 LYS399 TRP400 SER401 ILE402 LEU403 ALA404 PRO405 VAL406 PHE407 ILE408 PRO409 MET410 LEU411 MET412 LEU413 LEU414 GLY415 ILE416 SER417 PRO418 GLU419 ALA420 SER421 GLN422 ALA423 ALA424 TYR425 ARG426 VAL427 GLY428 ASP429 SER430 SER431 THR432 ASN433 ILE434 ILE435 THR436 PRO437 LEU438 MET439 PRO440 TYR441 PHE442 VAL443 LEU444 VAL445 LEU446 GLY447 PHE448 ALA449 ARG450 ARG451 TYR452 GLN453 PRO454 GLU455 THR456 GLY457 ILE458 GLY459 THR460 LEU461 ILE462 ALA463 LEU464 MET465 LEU466 PRO467 TYR468 SER469 LEU470 THR471 LEU472 LEU473 LEU474 GLY475 TRP476 SER477 VAL478 LEU479 LEU480 GLY481 VAL482 TRP483 ILE484 GLY485 PHE486 GLY487 TRP488 PRO489 LEU490 GLY491 PRO492
Unit 4 ARG10 LEU11 GLU12 GLN13 LEU14 GLY15 ASN16 ARG17 LEU18 PRO19 HIS20 PRO21 THR22 LEU23 LEU24 PHE25 VAL26 TRP27 PHE28 CYS29 LEU30 LEU31 LEU32 LEU33 PRO34 LEU35 THR36 ALA37 VAL38 LEU39 GLY40 ALA41 LEU42 ASP43 VAL44 THR45 ALA46 THR47 HIS48 PRO49 LEU50 THR51 ASP52 GLU53 THR54 ILE55 THR56 ALA57 HIS58 SER59 LEU60 LEU61 ASP62 ALA63 ASP64 GLY65 LEU66 ARG67 TYR68 LEU69 PHE70 THR71 THR72 LEU73 VAL74 GLY75 ASN76 PHE77 THR78 GLY79 PHE80 ALA81 PRO82 LEU83 GLY84 VAL85 VAL86 LEU87 VAL88 ALA89 MET90 LEU91 GLY92 LEU93 GLY94 VAL95 ALA96 GLU97 GLN98 SER99 GLY100 LEU101 LEU102 SER103 VAL104 SER105 LEU106 ALA107 SER108 LEU109 VAL110 ARG111 ARG112 SER113 SER114 GLY115 GLY116 ALA117 LEU118 VAL119 PHE120 THR121 VAL122 ALA123 PHE124 ALA125 GLY126 VAL127 LEU128 SER129 SER130 LEU131 THR132 VAL133 ASP134 ALA135 GLY136 TYR137 VAL138 VAL139 LEU140 ILE141 PRO142 LEU143 ALA144 GLY145 LEU146 VAL147 PHE148 GLN149 LEU150 ALA151 GLY152 ARG153 PRO154 PRO155 ILE156 ALA157 GLY158 ILE159 ALA160 THR161 ALA162 PHE163 ALA164 ALA165 VAL166 SER167 GLY168 GLY169 PHE170 SER171 ALA172 ASN173 LEU174 LEU175 VAL176 GLY177 PRO178 VAL179 ASP180 ALA181 THR182 LEU183 ALA184 GLY185 LEU186 SER187 THR188 GLU189 ALA190 ALA191 HIS192 ILE193 ILE194 ASP195 PRO196 ASP197 ARG198 THR199 VAL200 ALA201 ALA202 THR203 GLY204 ASN205 TYR206 TRP207 PHE208 ILE209 ILE210 ALA211 SER212 THR213 PHE214 LEU215 VAL216 THR217 GLY218 LEU219 VAL220 THR221 LEU222 ILE223 THR224 ARG225 THR226 LEU227 THR228 GLU229 PRO230 ARG231 LEU232 ALA233 HIS234 ALA235 ASN236 THR237 VAL238 ALA239 ASP240 ALA241 SER242 VAL243 ASP244 ALA245 PRO246 GLN247 ILE248 HIS249 SER250 ARG251 ALA252 MET253 LYS254 TRP255 THR256 GLY257 LEU258 THR259 LEU260 ALA261 ILE262 LEU263 LEU264 ALA265 GLY266 LEU267 ALA268 LEU269 LEU270 VAL271 LEU272 PRO273 ASN274 ASP275 ALA276 PRO277 LEU278 ARG279 HIS280 PRO281 ASP282 THR283 GLY284 SER285 VAL286 LEU287 GLY288 SER289 PRO290 PHE291 ILE292 HIS293 GLY294 LEU295 VAL296 VAL297 ILE298 VAL299 ALA300 LEU301 ILE302 ALA303 GLY304 ILE305 CYS306 GLY307 ALA308 VAL309 TYR310 GLY311 ARG312 VAL313 SER314 GLY315 GLN316 PHE317 ARG318 ASN319 SER320 GLY321 ALA322 VAL323 ILE324 THR325 ALA326 MET327 GLU328 VAL329 THR330 MET331 ALA332 SER333 MET334 ALA335 GLY336 TYR337 LEU338 VAL339 LEU340 MET341 PHE342 PHE343 ALA344 ALA345 GLN346 PHE347 VAL348 ALA349 TRP350 PHE351 ASN352 TYR353 SER354 GLN355 LEU356 GLY357 LEU358 LEU359 LEU360 ALA361 VAL362 LYS363 GLY364 ALA365 ALA366 TRP367 LEU368 GLY369 ALA370 LEU371 THR372 VAL373 PRO374 LYS375 VAL376 VAL377 LEU378 LEU379 LEU380 LEU381 PHE382 VAL383 VAL384 LEU385 THR386 ALA387 LEU388 ILE389 ASN390 LEU391 MET392 ILE393 GLY394 SER395 ALA396 SER397 ALA398 LYS399 TRP400 SER401 ILE402 LEU403 ALA404 PRO405 VAL406 PHE407 ILE408 PRO409 MET410 LEU411 MET412 LEU413 LEU414 GLY415 ILE416 SER417 PRO418 GLU419 ALA420 SER421 GLN422 ALA423 ALA424 TYR425 ARG426 VAL427 GLY428 ASP429 SER430 SER431 THR432 ASN433 ILE434 ILE435 THR436 PRO437 LEU438 MET439 PRO440 TYR441 PHE442 VAL443 LEU444 VAL445 LEU446 GLY447 PHE448 ALA449 ARG450 ARG451 TYR452 GLN453 PRO454 GLU455 THR456 GLY457 ILE458 GLY459 THR460 LEU461 ILE462 ALA463 LEU464 MET465 LEU466 PRO467 TYR468 SER469 LEU470 THR471 LEU472 LEU473 LEU474 GLY475 TRP476 SER477 VAL478 LEU479 LEU480 GLY481 VAL482 TRP483 ILE484 GLY485 PHE486 GLY487 TRP488 PRO489 LEU490 GLY491 PRO492
Ligands
Unit 5 NA801 LMT802 BOG803 LMT804 LMT805 LMT806
Unit 6 NA801
Unit 7 NA801 BOG802 LMT803 BOG804 LMT805
Unit 8 NA801 BOG802
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany