4QU2 - Sequence, Chains, Asymmetric and Biological Units

• Title: THE STRUCTURE OF JMJD7 WITH ALPHA-KG
• Keywords: JMJ-C DOMAIN, DEMETHYLATION, TRANSCRIPTION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4QU2	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	JMJC DOMAIN-CONTAINING PROTEIN 7	A	320	2544	11
2	Protein	JMJC DOMAIN-CONTAINING PROTEIN 7	B	318	2544	0
3	Protein	JMJC DOMAIN-CONTAINING PROTEIN 7	A	320	2544	11
4	Ligand	JMJC DOMAIN-CONTAINING PROTEIN 7	B	2	0	11
5	Water			89	0	89
total				1049	7632	122

Proteins

Unit 1	GLY -1 SER 0 MET 1 ALA 2 GLU 3 ALA 4 ALA 5 LEU 6 GLU 7 ALA 8 VAL 9 ARG 10 ARG 11 ALA 12 LEU 13 GLN 14 GLU 15 PHE 16 PRO 17 ALA 18 ALA 19 ALA 20 ARG 21 ASP 22 LEU 23 ASN 24 VAL 25 PRO 26 ARG 27 VAL 28 VAL 29 PRO 30 TYR 31 LEU 32 ASP 33 GLU 34 PRO 35 PRO 36 SER 37 PRO 38 LEU 39 CYS 40 PHE 41 TYR 42 ARG 43 ASP 44 TRP 45 VAL 46 CYS 47 PRO 48 ASN 49 ARG 50 PRO 51 CYS 52 ILE 53 ILE 54 ARG 55 ASN 56 ALA 57 LEU 58 GLN 59 HIS 60 TRP 61 PRO 62 ALA 63 LEU 64 GLN 65 LYS 66 TRP 67 SER 68 LEU 69 SER 70 TYR 71 LEU 72 ARG 73 ALA 74 THR 75 VAL 76 GLY 77 SER 78 THR 79 GLU 80 VAL 81 SER 82 VAL 83 ALA 84 VAL 85 THR 86 PRO 87 ASP 88 GLY 89 TYR 90 ALA 91 ASP 92 ALA 93 VAL 94 ARG 95 GLY 96 ASP 97 ARG 98 PHE 99 VAL 100 MET 101 PRO 102 ALA 103 GLU 104 ARG 105 ARG 106 LEU 107 PRO 108 ILE 109 SER 110 HIS 111 VAL 112 LEU 113 ASP 114 VAL 115 LEU 116 GLU 117 GLY 118 ARG 119 ALA 120 GLN 121 HIS 122 PRO 123 GLY 124 VAL 125 LEU 126 TYR 127 VAL 128 GLN 129 LYS 130 GLN 131 CYS 132 SER 133 ASN 134 LEU 135 PRO 136 THR 137 GLU 138 LEU 139 PRO 140 GLN 141 LEU 142 LEU 143 SER 144 ASP 145 ILE 146 GLU 147 SER 148 HIS 149 VAL 150 PRO 151 TRP 152 ALA 153 SER 154 GLU 155 SER 156 LEU 157 GLY 158 LYS 159 MET 160 PRO 161 ASP 162 ALA 163 VAL 164 ASN 165 PHE 166 TRP 167 LEU 168 GLY 169 ASP 170 ALA 171 SER 172 ALA 173 VAL 174 THR 175 SER 176 LEU 177 HIS 178 LYS 179 ASP 180 HIS 181 TYR 182 GLU 183 ASN 184 LEU 185 TYR 186 CYS 187 VAL 188 VAL 189 SER 190 GLY 191 GLU 192 LYS 193 HIS 194 PHE 195 LEU 196 LEU 197 HIS 198 PRO 199 PRO 200 SER 201 ASP 202 ARG 203 PRO 204 PHE 205 ILE 206 PRO 207 TYR 208 ASN 209 LEU 210 TYR 211 THR 212 PRO 213 ALA 214 THR 215 TYR 216 GLN 217 LEU 218 THR 219 GLU 220 GLU 221 GLY 222 THR 223 PHE 224 ARG 225 VAL 226 VAL 227 ASP 228 GLU 229 GLU 230 ALA 231 MET 232 GLU 233 LYS 234 VAL 235 PRO 236 TRP 237 ILE 238 PRO 239 LEU 240 ASP 241 PRO 242 LEU 243 ALA 244 PRO 245 ASP 246 LEU 247 THR 248 GLN 249 TYR 250 PRO 251 SER 252 TYR 253 SER 254 GLN 255 ALA 256 GLN 257 ALA 258 LEU 259 HIS 260 CYS 261 THR 262 VAL 263 ARG 264 ALA 265 GLY 266 GLU 267 MET 268 LEU 269 TYR 270 LEU 271 PRO 272 ALA 273 LEU 274 TRP 275 PHE 276 HIS 277 HIS 278 VAL 279 GLN 280 GLN 281 SER 282 HIS 283 GLY 284 CYS 285 ILE 286 ALA 287 VAL 288 ASN 289 PHE 290 TRP 291 TYR 292 ASP 293 MET 294 GLU 295 TYR 296 ASP 297 LEU 298 LYS 299 TYR 300 SER 301 TYR 302 PHE 303 GLN 304 LEU 305 MET 306 ASP 307 THR 308 LEU 309 THR 310 ARG 311 ALA 312 THR 313 GLY 314 LEU 315 ASP 316 NI 501 AKG 502
Unit 2	GLY -1 SER 0 MET 1 ALA 2 GLU 3 ALA 4 ALA 5 LEU 6 GLU 7 ALA 8 VAL 9 ARG 10 ARG 11 ALA 12 LEU 13 GLN 14 GLU 15 PHE 16 PRO 17 ALA 18 ALA 19 ALA 20 ARG 21 ASP 22 LEU 23 ASN 24 VAL 25 PRO 26 ARG 27 VAL 28 VAL 29 PRO 30 TYR 31 LEU 32 ASP 33 GLU 34 PRO 35 PRO 36 SER 37 PRO 38 LEU 39 CYS 40 PHE 41 TYR 42 ARG 43 ASP 44 TRP 45 VAL 46 CYS 47 PRO 48 ASN 49 ARG 50 PRO 51 CYS 52 ILE 53 ILE 54 ARG 55 ASN 56 ALA 57 LEU 58 GLN 59 HIS 60 TRP 61 PRO 62 ALA 63 LEU 64 GLN 65 LYS 66 TRP 67 SER 68 LEU 69 SER 70 TYR 71 LEU 72 ARG 73 ALA 74 THR 75 VAL 76 GLY 77 SER 78 THR 79 GLU 80 VAL 81 SER 82 VAL 83 ALA 84 VAL 85 THR 86 PRO 87 ASP 88 GLY 89 TYR 90 ALA 91 ASP 92 ALA 93 VAL 94 ARG 95 GLY 96 ASP 97 ARG 98 PHE 99 VAL 100 MET 101 PRO 102 ALA 103 GLU 104 ARG 105 ARG 106 LEU 107 PRO 108 ILE 109 SER 110 HIS 111 VAL 112 LEU 113 ASP 114 VAL 115 LEU 116 GLU 117 GLY 118 ARG 119 ALA 120 GLN 121 HIS 122 PRO 123 GLY 124 VAL 125 LEU 126 TYR 127 VAL 128 GLN 129 LYS 130 GLN 131 CYS 132 SER 133 ASN 134 LEU 135 PRO 136 THR 137 GLU 138 LEU 139 PRO 140 GLN 141 LEU 142 LEU 143 SER 144 ASP 145 ILE 146 GLU 147 SER 148 HIS 149 VAL 150 PRO 151 TRP 152 ALA 153 SER 154 GLU 155 SER 156 LEU 157 GLY 158 LYS 159 MET 160 PRO 161 ASP 162 ALA 163 VAL 164 ASN 165 PHE 166 TRP 167 LEU 168 GLY 169 ASP 170 ALA 171 SER 172 ALA 173 VAL 174 THR 175 SER 176 LEU 177 HIS 178 LYS 179 ASP 180 HIS 181 TYR 182 GLU 183 ASN 184 LEU 185 TYR 186 CYS 187 VAL 188 VAL 189 SER 190 GLY 191 GLU 192 LYS 193 HIS 194 PHE 195 LEU 196 LEU 197 HIS 198 PRO 199 PRO 200 SER 201 ASP 202 ARG 203 PRO 204 PHE 205 ILE 206 PRO 207 TYR 208 ASN 209 LEU 210 TYR 211 THR 212 PRO 213 ALA 214 THR 215 TYR 216 GLN 217 LEU 218 THR 219 GLU 220 GLU 221 GLY 222 THR 223 PHE 224 ARG 225 VAL 226 VAL 227 ASP 228 GLU 229 GLU 230 ALA 231 MET 232 GLU 233 LYS 234 VAL 235 PRO 236 TRP 237 ILE 238 PRO 239 LEU 240 ASP 241 PRO 242 LEU 243 ALA 244 PRO 245 ASP 246 LEU 247 THR 248 GLN 249 TYR 250 PRO 251 SER 252 TYR 253 SER 254 GLN 255 ALA 256 GLN 257 ALA 258 LEU 259 HIS 260 CYS 261 THR 262 VAL 263 ARG 264 ALA 265 GLY 266 GLU 267 MET 268 LEU 269 TYR 270 LEU 271 PRO 272 ALA 273 LEU 274 TRP 275 PHE 276 HIS 277 HIS 278 VAL 279 GLN 280 GLN 281 SER 282 HIS 283 GLY 284 CYS 285 ILE 286 ALA 287 VAL 288 ASN 289 PHE 290 TRP 291 TYR 292 ASP 293 MET 294 GLU 295 TYR 296 ASP 297 LEU 298 LYS 299 TYR 300 SER 301 TYR 302 PHE 303 GLN 304 LEU 305 MET 306 ASP 307 THR 308 LEU 309 THR 310 ARG 311 ALA 312 THR 313 GLY 314 LEU 315 ASP 316
Unit 3	GLY -1 SER 0 MET 1 ALA 2 GLU 3 ALA 4 ALA 5 LEU 6 GLU 7 ALA 8 VAL 9 ARG 10 ARG 11 ALA 12 LEU 13 GLN 14 GLU 15 PHE 16 PRO 17 ALA 18 ALA 19 ALA 20 ARG 21 ASP 22 LEU 23 ASN 24 VAL 25 PRO 26 ARG 27 VAL 28 VAL 29 PRO 30 TYR 31 LEU 32 ASP 33 GLU 34 PRO 35 PRO 36 SER 37 PRO 38 LEU 39 CYS 40 PHE 41 TYR 42 ARG 43 ASP 44 TRP 45 VAL 46 CYS 47 PRO 48 ASN 49 ARG 50 PRO 51 CYS 52 ILE 53 ILE 54 ARG 55 ASN 56 ALA 57 LEU 58 GLN 59 HIS 60 TRP 61 PRO 62 ALA 63 LEU 64 GLN 65 LYS 66 TRP 67 SER 68 LEU 69 SER 70 TYR 71 LEU 72 ARG 73 ALA 74 THR 75 VAL 76 GLY 77 SER 78 THR 79 GLU 80 VAL 81 SER 82 VAL 83 ALA 84 VAL 85 THR 86 PRO 87 ASP 88 GLY 89 TYR 90 ALA 91 ASP 92 ALA 93 VAL 94 ARG 95 GLY 96 ASP 97 ARG 98 PHE 99 VAL 100 MET 101 PRO 102 ALA 103 GLU 104 ARG 105 ARG 106 LEU 107 PRO 108 ILE 109 SER 110 HIS 111 VAL 112 LEU 113 ASP 114 VAL 115 LEU 116 GLU 117 GLY 118 ARG 119 ALA 120 GLN 121 HIS 122 PRO 123 GLY 124 VAL 125 LEU 126 TYR 127 VAL 128 GLN 129 LYS 130 GLN 131 CYS 132 SER 133 ASN 134 LEU 135 PRO 136 THR 137 GLU 138 LEU 139 PRO 140 GLN 141 LEU 142 LEU 143 SER 144 ASP 145 ILE 146 GLU 147 SER 148 HIS 149 VAL 150 PRO 151 TRP 152 ALA 153 SER 154 GLU 155 SER 156 LEU 157 GLY 158 LYS 159 MET 160 PRO 161 ASP 162 ALA 163 VAL 164 ASN 165 PHE 166 TRP 167 LEU 168 GLY 169 ASP 170 ALA 171 SER 172 ALA 173 VAL 174 THR 175 SER 176 LEU 177 HIS 178 LYS 179 ASP 180 HIS 181 TYR 182 GLU 183 ASN 184 LEU 185 TYR 186 CYS 187 VAL 188 VAL 189 SER 190 GLY 191 GLU 192 LYS 193 HIS 194 PHE 195 LEU 196 LEU 197 HIS 198 PRO 199 PRO 200 SER 201 ASP 202 ARG 203 PRO 204 PHE 205 ILE 206 PRO 207 TYR 208 ASN 209 LEU 210 TYR 211 THR 212 PRO 213 ALA 214 THR 215 TYR 216 GLN 217 LEU 218 THR 219 GLU 220 GLU 221 GLY 222 THR 223 PHE 224 ARG 225 VAL 226 VAL 227 ASP 228 GLU 229 GLU 230 ALA 231 MET 232 GLU 233 LYS 234 VAL 235 PRO 236 TRP 237 ILE 238 PRO 239 LEU 240 ASP 241 PRO 242 LEU 243 ALA 244 PRO 245 ASP 246 LEU 247 THR 248 GLN 249 TYR 250 PRO 251 SER 252 TYR 253 SER 254 GLN 255 ALA 256 GLN 257 ALA 258 LEU 259 HIS 260 CYS 261 THR 262 VAL 263 ARG 264 ALA 265 GLY 266 GLU 267 MET 268 LEU 269 TYR 270 LEU 271 PRO 272 ALA 273 LEU 274 TRP 275 PHE 276 HIS 277 HIS 278 VAL 279 GLN 280 GLN 281 SER 282 HIS 283 GLY 284 CYS 285 ILE 286 ALA 287 VAL 288 ASN 289 PHE 290 TRP 291 TYR 292 ASP 293 MET 294 GLU 295 TYR 296 ASP 297 LEU 298 LYS 299 TYR 300 SER 301 TYR 302 PHE 303 GLN 304 LEU 305 MET 306 ASP 307 THR 308 LEU 309 THR 310 ARG 311 ALA 312 THR 313 GLY 314 LEU 315 ASP 316 NI 501 AKG 502

Ligands

Unit 4

NI 501 AKG 502