4QTR - Sequence, Chains, Asymmetric and Biological Units

• Title: COMPUTATIONAL DESIGN OF CO-ASSEMBLING PROTEIN-DNA NANOWIRES
• Keywords: HELIX-TURN-HELIX, DNA-BINDING PROTEIN, DOUBLE-STRANDED DNA, DESIGN-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4QTR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DUALENH	A	55	386	0
2	Protein	DUALENH	B	54	413	0
3	Protein	DUALENH	C	57	425	0
4	Protein	DUALENH	D	55	386	0
5	Other macromolecule	DNA (5'- D(P*GP*TP*GP*TP*AP*AP*TP*TP*TP*AP*AP*TP*TP*TP*CP*C)-3')	E	15	307	0
6	Other macromolecule	DNA (5'- D(P*CP*GP*GP*AP*AP*AP*TP*TP*AP*AP*AP*TP*TP*AP*CP*A)-3')	F	16	330	0
7	Other macromolecule	DNA (5'- D(P*GP*TP*GP*TP*AP*AP*TP*TP*TP*AP*AP*TP*TP*TP*CP*C)-3')	G	16	326	0
8	Other macromolecule	DNA (5'- D(P*CP*GP*GP*AP*AP*AP*TP*TP*AP*AP*AP*TP*TP*AP*CP*A)-3')	H	16	330	0
total				284	2903	0

Proteins

Unit 1	ARG 5 THR 6 ALA 7 PHE 8 SER 9 GLU 10 GLU 11 GLN 12 LYS 13 LYS 14 ALA 15 LEU 16 ASP 17 LEU 18 ALA 19 PHE 20 TYR 21 PHE 22 ASP 23 ARG 24 TYR 25 LEU 26 THR 27 PRO 28 GLU 29 TRP 30 ARG 31 ARG 32 TYR 33 LEU 34 SER 35 GLN 36 ARG 37 LEU 38 GLY 39 LEU 40 ASN 41 GLU 42 ALA 43 GLN 44 ILE 45 LYS 46 ILE 47 TRP 48 PHE 49 GLN 50 ASN 51 LYS 52 ARG 53 ALA 54 LYS 55 ILE 56 LYS 57 LYS 58 SER 59
Unit 2	THR 6 ALA 7 PHE 8 SER 9 GLU 10 GLU 11 GLN 12 LYS 13 LYS 14 ALA 15 LEU 16 ASP 17 LEU 18 ALA 19 PHE 20 TYR 21 PHE 22 ASP 23 ARG 24 TYR 25 LEU 26 THR 27 PRO 28 GLU 29 TRP 30 ARG 31 ARG 32 TYR 33 LEU 34 SER 35 GLN 36 ARG 37 LEU 38 GLY 39 LEU 40 ASN 41 GLU 42 ALA 43 GLN 44 ILE 45 LYS 46 ILE 47 TRP 48 PHE 49 GLN 50 ASN 51 LYS 52 ARG 53 ALA 54 LYS 55 ILE 56 LYS 57 LYS 58 SER 59
Unit 3	ARG 5 THR 6 ALA 7 PHE 8 SER 9 GLU 10 GLU 11 GLN 12 LYS 13 LYS 14 ALA 15 LEU 16 ASP 17 LEU 18 ALA 19 PHE 20 TYR 21 PHE 22 ASP 23 ARG 24 TYR 25 LEU 26 THR 27 PRO 28 GLU 29 TRP 30 ARG 31 ARG 32 TYR 33 LEU 34 SER 35 GLN 36 ARG 37 LEU 38 GLY 39 LEU 40 ASN 41 GLU 42 ALA 43 GLN 44 ILE 45 LYS 46 ILE 47 TRP 48 PHE 49 GLN 50 ASN 51 LYS 52 ARG 53 ALA 54 LYS 55 ILE 56 LYS 57 LYS 58 SER 59 THR 60 GLY 61
Unit 4	ARG 5 THR 6 ALA 7 PHE 8 SER 9 GLU 10 GLU 11 GLN 12 LYS 13 LYS 14 ALA 15 LEU 16 ASP 17 LEU 18 ALA 19 PHE 20 TYR 21 PHE 22 ASP 23 ARG 24 TYR 25 LEU 26 THR 27 PRO 28 GLU 29 TRP 30 ARG 31 ARG 32 TYR 33 LEU 34 SER 35 GLN 36 ARG 37 LEU 38 GLY 39 LEU 40 ASN 41 GLU 42 ALA 43 GLN 44 ILE 45 LYS 46 ILE 47 TRP 48 PHE 49 GLN 50 ASN 51 LYS 52 ARG 53 ALA 54 LYS 55 ILE 56 LYS 57 LYS 58 SER 59

Other macromolecules

Unit 5	DG 1 DT 2 DG 3 DT 4 DA 5 DA 6 DT 7 DT 8 DT 9 DA 10 DA 11 DT 12 DT 13 DT 14 DC 15
Unit 6	DC 1 DG 2 DG 3 DA 4 DA 5 DA 6 DT 7 DT 8 DA 9 DA 10 DA 11 DT 12 DT 13 DA 14 DC 15 DA 16
Unit 7	DG 1 DT 2 DG 3 DT 4 DA 5 DA 6 DT 7 DT 8 DT 9 DA 10 DA 11 DT 12 DT 13 DT 14 DC 15 DC 16
Unit 8	DC 1 DG 2 DG 3 DA 4 DA 5 DA 6 DT 7 DT 8 DA 9 DA 10 DA 11 DT 12 DT 13 DA 14 DC 15 DA 16