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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MOUSE JMJD7 FUSED WITH MALTOSE-BINDING
Keywords DEMETHYLASE, TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4QSZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN, JMJC DOMAIN- PROTEIN 7 CHIMERA  A 686 5395 0
2  Protein   MALTOSE-BINDING PERIPLASMIC PROTEIN, JMJC DOMAIN- PROTEIN 7 CHIMERA  B 682 5365 0
3  Ligand   MALTOSE-BINDING PERIPLASMIC PROTEIN, JMJC DOMAIN- PROTEIN 7 CHIMERA  A 3 0 36
4  Ligand   MALTOSE-BINDING PERIPLASMIC PROTEIN, JMJC DOMAIN- PROTEIN 7 CHIMERA  B 3 0 36
total       1374 10760 72

Proteins
Unit 1 LYS-370 ILE-369 GLU-368 GLU-367 GLY-366 LYS-365 LEU-364 VAL-363 ILE-362 TRP-361 ILE-360 ASN-359 GLY-358 ASP-357 LYS-356 GLY-355 TYR-354 ASN-353 GLY-352 LEU-351 ALA-350 GLU-349 VAL-348 GLY-347 LYS-346 LYS-345 PHE-344 GLU-343 LYS-342 ASP-341 THR-340 GLY-339 ILE-338 LYS-337 VAL-336 THR-335 VAL-334 GLU-333 HIS-332 PRO-331 ASP-330 LYS-329 LEU-328 GLU-327 GLU-326 LYS-325 PHE-324 PRO-323 GLN-322 VAL-321 ALA-320 ALA-319 THR-318 GLY-317 ASP-316 GLY-315 PRO-314 ASP-313 ILE-312 ILE-311 PHE-310 TRP-309 ALA-308 HIS-307 ASP-306 ARG-305 PHE-304 GLY-303 GLY-302 TYR-301 ALA-300 GLN-299 SER-298 GLY-297 LEU-296 LEU-295 ALA-294 GLU-293 ILE-292 THR-291 PRO-290 ASP-289 LYS-288 ALA-287 PHE-286 GLN-285 ASP-284 LYS-283 LEU-282 TYR-281 PRO-280 PHE-279 THR-278 TRP-277 ASP-276 ALA-275 VAL-274 ARG-273 TYR-272 ASN-271 GLY-270 LYS-269 LEU-268 ILE-267 ALA-266 TYR-265 PRO-264 ILE-263 ALA-262 VAL-261 GLU-260 ALA-259 LEU-258 SER-257 LEU-256 ILE-255 TYR-254 ASN-253 LYS-252 ASP-251 LEU-250 LEU-249 PRO-248 ASN-247 PRO-246 PRO-245 LYS-244 THR-243 TRP-242 GLU-241 GLU-240 ILE-239 PRO-238 ALA-237 LEU-236 ASP-235 LYS-234 GLU-233 LEU-232 LYS-231 ALA-230 LYS-229 GLY-228 LYS-227 SER-226 ALA-225 LEU-224 MET-223 PHE-222 ASN-221 LEU-220 GLN-219 GLU-218 PRO-217 TYR-216 PHE-215 THR-214 TRP-213 PRO-212 LEU-211 ILE-210 ALA-209 ALA-208 ASP-207 GLY-206 GLY-205 TYR-204 ALA-203 PHE-202 LYS-201 TYR-200 GLU-199 ASN-198 GLY-197 LYS-196 TYR-195 ASP-194 ILE-193 LYS-192 ASP-191 VAL-190 GLY-189 VAL-188 ASP-187 ASN-186 ALA-185 GLY-184 ALA-183 LYS-182 ALA-181 GLY-180 LEU-179 THR-178 PHE-177 LEU-176 VAL-175 ASP-174 LEU-173 ILE-172 LYS-171 ASN-170 LYS-169 HIS-168 MET-167 ASN-166 ALA-165 ASP-164 THR-163 ASP-162 TYR-161 SER-160 ILE-159 ALA-158 GLU-157 ALA-156 ALA-155 PHE-154 ASN-153 LYS-152 GLY-151 GLU-150 THR-149 ALA-148 MET-147 THR-146 ILE-145 ASN-144 GLY-143 PRO-142 TRP-141 ALA-140 TRP-139 SER-138 ASN-137 ILE-136 ASP-135 THR-134 SER-133 LYS-132 VAL-131 ASN-130 TYR-129 GLY-128 VAL-127 THR-126 VAL-125 LEU-124 PRO-123 THR-122 PHE-121 LYS-120 GLY-119 GLN-118 PRO-117 SER-116 LYS-115 PRO-114 PHE-113 VAL-112 GLY-111 VAL-110 LEU-109 SER-108 ALA-107 GLY-106 ILE-105 ASN-104 ALA-103 ALA-102 SER-101 PRO-100 ASN-99 LYS-98 GLU-97 LEU-96 ALA-95 LYS-94 GLU-93 PHE-92 LEU-91 GLU-90 ASN-89 TYR-88 LEU-87 LEU-86 THR-85 ASP-84 GLU-83 GLY-82 LEU-81 GLU-80 ALA-79 VAL-78 ASN-77 LYS-76 ASP-75 LYS-74 PRO-73 LEU-72 GLY-71 ALA-70 VAL-69 ALA-68 LEU-67 LYS-66 SER-65 TYR-64 GLU-63 GLU-62 GLU-61 LEU-60 ALA-59 LYS-58 ASP-57 PRO-56 ARG-55 ILE-54 ALA-53 ALA-52 THR-51 MET-50 GLU-49 ASN-48 ALA-47 GLN-46 LYS-45 GLY-44 GLU-43 ILE-42 MET-41 PRO-40 ASN-39 ILE-38 PRO-37 GLN-36 MET-35 SER-34 ALA-33 PHE-32 TRP-31 TYR-30 ALA-29 VAL-28 ARG-27 THR-26 ALA-25 VAL-24 ILE-23 ASN-22 ALA-21 ALA-20 SER-19 GLY-18 ARG-17 GLN-16 THR-15 VAL-14 ASP-13 GLU-12 ALA-11 LEU-10 ALA-9 ALA-8 ALA-7 GLN-6 THR-5 ASN-4 ALA-3 ALA-2 ALA-1 GLU0 PHE1 ALA2 GLU3 ALA4 ALA5 LEU6 GLU7 ALA8 VAL9 ARG10 ARG11 ALA12 LEU13 GLN14 GLU15 PHE16 PRO17 ALA18 ALA19 ALA20 ARG21 ASP22 LEU23 ASN24 VAL25 PRO26 ARG27 VAL28 VAL29 PRO30 TYR31 LEU32 ASP33 GLU34 PRO35 PRO36 SER37 PRO38 LEU39 CYS40 PHE41 TYR42 ARG43 ASP44 TRP45 VAL46 CYS47 PRO48 ASN49 ARG50 PRO51 CYS52 ILE53 ILE54 ARG55 ASN56 ALA57 LEU58 GLN59 HIS60 TRP61 PRO62 ALA63 LEU64 GLN65 LYS66 TRP67 SER68 LEU69 SER70 TYR71 LEU72 ARG73 ALA74 THR75 VAL76 GLY77 SER78 THR79 GLU80 VAL81 SER82 VAL83 ALA84 VAL85 THR86 PRO87 ASP88 GLY89 TYR90 ALA91 ASP92 ALA93 VAL94 ARG95 GLY96 ASP97 ARG98 PHE99 VAL100 MET101 PRO102 ALA103 GLU104 ARG105 ARG106 LEU107 PRO108 ILE109 SER110 HIS111 VAL112 LEU113 ASP114 VAL115 LEU116 GLU117 GLY118 ARG119 ALA120 GLN121 HIS122 PRO123 GLY124 VAL125 LEU126 TYR127 VAL128 GLN129 LYS130 CYS132 SER133 ASN134 LEU135 PRO136 THR137 GLU138 LEU139 PRO140 GLN141 LEU142 LEU143 SER144 ASP145 ILE146 GLU147 SER148 HIS149 VAL150 PRO151 TRP152 ALA153 SER154 GLU155 SER156 LEU157 GLY158 LYS159 MET160 PRO161 ASP162 ALA163 VAL164 ASN165 PHE166 TRP167 LEU168 GLY169 ASP170 ALA171 SER172 ALA173 VAL174 THR175 SER176 LEU177 HIS178 LYS179 ASP180 HIS181 TYR182 GLU183 ASN184 LEU185 TYR186 CYS187 VAL188 VAL189 SER190 GLY191 GLU192 LYS193 HIS194 PHE195 LEU196 LEU197 HIS198 PRO199 PRO200 SER201 ASP202 ARG203 PRO204 PHE205 ILE206 PRO207 TYR208 ASN209 LEU210 TYR211 THR212 PRO213 ALA214 THR215 TYR216 GLN217 LEU218 THR219 GLU220 GLU221 GLY222 THR223 PHE224 ARG225 VAL226 VAL227 ASP228 GLU229 GLU230 ALA231 MET232 GLU233 LYS234 VAL235 PRO236 TRP237 ILE238 PRO239 LEU240 ASP241 PRO242 LEU243 ALA244 PRO245 ASP246 LEU247 THR248 GLN249 TYR250 PRO251 SER252 TYR253 SER254 GLN255 ALA256 GLN257 ALA258 LEU259 HIS260 CYS261 THR262 VAL263 ARG264 ALA265 GLY266 GLU267 MET268 LEU269 TYR270 LEU271 PRO272 ALA273 LEU274 TRP275 PHE276 HIS277 HIS278 VAL279 GLN280 GLN281 SER282 HIS283 GLY284 CYS285 ILE286 ALA287 VAL288 ASN289 PHE290 TRP291 TYR292 ASP293 MET294 GLU295 TYR296 ASP297 LEU298 LYS299 TYR300 SER301 TYR302 PHE303 GLN304 LEU305 MET306 ASP307 THR308 LEU309 THR310 ARG311 ALA312 THR313 GLY314 LEU315 ASP316
Unit 2 LYS-365 LEU-364 VAL-363 ILE-362 TRP-361 ILE-360 ASN-359 GLY-358 ASP-357 LYS-356 GLY-355 TYR-354 ASN-353 GLY-352 LEU-351 ALA-350 GLU-349 VAL-348 GLY-347 LYS-346 LYS-345 PHE-344 GLU-343 LYS-342 ASP-341 THR-340 GLY-339 ILE-338 LYS-337 VAL-336 THR-335 VAL-334 GLU-333 HIS-332 PRO-331 ASP-330 LYS-329 LEU-328 GLU-327 GLU-326 LYS-325 PHE-324 PRO-323 GLN-322 VAL-321 ALA-320 ALA-319 THR-318 GLY-317 ASP-316 GLY-315 PRO-314 ASP-313 ILE-312 ILE-311 PHE-310 TRP-309 ALA-308 HIS-307 ASP-306 ARG-305 PHE-304 GLY-303 GLY-302 TYR-301 ALA-300 GLN-299 SER-298 GLY-297 LEU-296 LEU-295 ALA-294 GLU-293 ILE-292 THR-291 PRO-290 ASP-289 LYS-288 ALA-287 PHE-286 GLN-285 ASP-284 LYS-283 LEU-282 TYR-281 PRO-280 PHE-279 THR-278 TRP-277 ASP-276 ALA-275 VAL-274 ARG-273 TYR-272 ASN-271 GLY-270 LYS-269 LEU-268 ILE-267 ALA-266 TYR-265 PRO-264 ILE-263 ALA-262 VAL-261 GLU-260 ALA-259 LEU-258 SER-257 LEU-256 ILE-255 TYR-254 ASN-253 LYS-252 ASP-251 LEU-250 LEU-249 PRO-248 ASN-247 PRO-246 PRO-245 LYS-244 THR-243 TRP-242 GLU-241 GLU-240 ILE-239 PRO-238 ALA-237 LEU-236 ASP-235 LYS-234 GLU-233 LEU-232 LYS-231 ALA-230 LYS-229 GLY-228 LYS-227 SER-226 ALA-225 LEU-224 MET-223 PHE-222 ASN-221 LEU-220 GLN-219 GLU-218 PRO-217 TYR-216 PHE-215 THR-214 TRP-213 PRO-212 LEU-211 ILE-210 ALA-209 ALA-208 ASP-207 GLY-206 GLY-205 TYR-204 ALA-203 PHE-202 LYS-201 TYR-200 GLU-199 ASN-198 GLY-197 LYS-196 TYR-195 ASP-194 ILE-193 LYS-192 ASP-191 VAL-190 GLY-189 VAL-188 ASP-187 ASN-186 ALA-185 GLY-184 ALA-183 LYS-182 ALA-181 GLY-180 LEU-179 THR-178 PHE-177 LEU-176 VAL-175 ASP-174 LEU-173 ILE-172 LYS-171 ASN-170 LYS-169 HIS-168 MET-167 ASN-166 ALA-165 ASP-164 THR-163 ASP-162 TYR-161 SER-160 ILE-159 ALA-158 GLU-157 ALA-156 ALA-155 PHE-154 ASN-153 LYS-152 GLY-151 GLU-150 THR-149 ALA-148 MET-147 THR-146 ILE-145 ASN-144 GLY-143 PRO-142 TRP-141 ALA-140 TRP-139 SER-138 ASN-137 ILE-136 ASP-135 THR-134 SER-133 LYS-132 VAL-131 ASN-130 TYR-129 GLY-128 VAL-127 THR-126 VAL-125 LEU-124 PRO-123 THR-122 PHE-121 LYS-120 GLY-119 GLN-118 PRO-117 SER-116 LYS-115 PRO-114 PHE-113 VAL-112 GLY-111 VAL-110 LEU-109 SER-108 ALA-107 GLY-106 ILE-105 ASN-104 ALA-103 ALA-102 SER-101 PRO-100 ASN-99 LYS-98 GLU-97 LEU-96 ALA-95 LYS-94 GLU-93 PHE-92 LEU-91 GLU-90 ASN-89 TYR-88 LEU-87 LEU-86 THR-85 ASP-84 GLU-83 GLY-82 LEU-81 GLU-80 ALA-79 VAL-78 ASN-77 LYS-76 ASP-75 LYS-74 PRO-73 LEU-72 GLY-71 ALA-70 VAL-69 ALA-68 LEU-67 LYS-66 SER-65 TYR-64 GLU-63 GLU-62 GLU-61 LEU-60 ALA-59 LYS-58 ASP-57 PRO-56 ARG-55 ILE-54 ALA-53 ALA-52 THR-51 MET-50 GLU-49 ASN-48 ALA-47 GLN-46 LYS-45 GLY-44 GLU-43 ILE-42 MET-41 PRO-40 ASN-39 ILE-38 PRO-37 GLN-36 MET-35 SER-34 ALA-33 PHE-32 TRP-31 TYR-30 ALA-29 VAL-28 ARG-27 THR-26 ALA-25 VAL-24 ILE-23 ASN-22 ALA-21 ALA-20 SER-19 GLY-18 ARG-17 GLN-16 THR-15 VAL-14 ASP-13 GLU-12 ALA-11 LEU-10 ALA-9 ALA-8 ALA-7 GLN-6 THR-5 ASN-4 ALA-3 ALA-2 ALA-1 GLU0 PHE1 ALA2 GLU3 ALA4 ALA5 LEU6 GLU7 ALA8 VAL9 ARG10 ARG11 ALA12 LEU13 GLN14 GLU15 PHE16 PRO17 ALA18 ALA19 ALA20 ARG21 ASP22 LEU23 ASN24 VAL25 PRO26 ARG27 VAL28 VAL29 PRO30 TYR31 LEU32 ASP33 GLU34 PRO35 PRO36 SER37 PRO38 LEU39 CYS40 PHE41 TYR42 ARG43 ASP44 TRP45 VAL46 CYS47 PRO48 ASN49 ARG50 PRO51 CYS52 ILE53 ILE54 ARG55 ASN56 ALA57 LEU58 GLN59 HIS60 TRP61 PRO62 ALA63 LEU64 GLN65 LYS66 TRP67 SER68 LEU69 SER70 TYR71 LEU72 ARG73 ALA74 THR75 VAL76 GLY77 SER78 THR79 GLU80 VAL81 SER82 VAL83 ALA84 VAL85 THR86 PRO87 ASP88 GLY89 TYR90 ALA91 ASP92 ALA93 VAL94 ARG95 GLY96 ASP97 ARG98 PHE99 VAL100 MET101 PRO102 ALA103 GLU104 ARG105 ARG106 LEU107 PRO108 ILE109 SER110 HIS111 VAL112 LEU113 ASP114 VAL115 LEU116 GLU117 GLY118 ARG119 ALA120 GLN121 HIS122 PRO123 GLY124 VAL125 LEU126 TYR127 VAL128 GLN129 LYS130 GLN131 CYS132 SER133 ASN134 LEU135 PRO136 THR137 GLU138 LEU139 PRO140 GLN141 LEU142 LEU143 SER144 ASP145 ILE146 GLU147 SER148 HIS149 VAL150 PRO151 TRP152 ALA153 SER154 GLU155 SER156 LEU157 GLY158 LYS159 MET160 PRO161 ASP162 ALA163 VAL164 ASN165 PHE166 TRP167 LEU168 GLY169 ASP170 ALA171 SER172 ALA173 VAL174 THR175 SER176 LEU177 HIS178 LYS179 ASP180 HIS181 TYR182 GLU183 ASN184 LEU185 TYR186 CYS187 VAL188 VAL189 SER190 GLY191 GLU192 LYS193 HIS194 PHE195 LEU196 LEU197 HIS198 PRO199 PRO200 SER201 ASP202 ARG203 PRO204 PHE205 ILE206 PRO207 TYR208 ASN209 LEU210 TYR211 THR212 PRO213 ALA214 THR215 TYR216 GLN217 LEU218 THR219 GLU220 GLU221 GLY222 THR223 PHE224 ARG225 VAL226 VAL227 ASP228 GLU229 GLU230 ALA231 MET232 GLU233 LYS234 VAL235 PRO236 TRP237 ILE238 PRO239 LEU240 ASP241 PRO242 LEU243 ALA244 PRO245 ASP246 LEU247 THR248 GLN249 TYR250 PRO251 SER252 TYR253 SER254 GLN255 ALA256 GLN257 ALA258 LEU259 HIS260 CYS261 THR262 VAL263 ARG264 ALA265 GLY266 GLU267 MET268 LEU269 TYR270 LEU271 PRO272 ALA273 LEU274 TRP275 PHE276 HIS277 HIS278 VAL279 GLN280 GLN281 SER282 HIS283 GLY284 CYS285 ILE286 ALA287 VAL288 ASN289 PHE290 TRP291 TYR292 ASP293 MET294 GLU295 TYR296 ASP297 LEU298 LYS299 TYR300 SER301 TYR302 PHE303 GLN304 LEU305 MET306 ASP307 THR308 LEU309 THR310 ARG311 ALA312 THR313 GLY314 LEU315 ASP316

Ligands
Unit 3 GLC901 GLC902 FLC903
Unit 4 GLC901 GLC902 FLC903

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany