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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL BASIS FOR THE ASSEMBLY OF THE SXL-UNR TRANSLATION REGULATORY COMPLEX
Keywords RNA BINDING DOMAINS, RNA RECOGNITION MOTIF, RRM, COLD SHOCK CSD, RNA BINDING, TRANSLATION REGULATION, DOSAGE COMPENSATI TRANSCRIPTION-RNA COMPLEX, TRANLATION-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4QQB     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    P 17 358 0
2  Protein   PROTEIN SEX-LETHAL  A 169 1345 0
3  RNA    C 17 358 0
4  Protein   PROTEIN SEX-LETHAL  B 169 1345 0
5  Protein   UPSTREAM OF N-RAS, ISOFORM A  X 72 575 0
6  Protein   UPSTREAM OF N-RAS, ISOFORM A  Y 72 575 0
total       516 4556 0
Proteins
Unit 2 SER123 ASN124 THR125 ASN126 LEU127 ILE128 VAL129 ASN130 TYR131 LEU132 PRO133 GLN134 ASP135 MET136 THR137 ASP138 ARG139 GLU140 LEU141 TYR142 ALA143 LEU144 PHE145 ARG146 ALA147 ILE148 GLY149 PRO150 ILE151 ASN152 THR153 CYS154 ARG155 ILE156 MET157 ARG158 ASP159 TYR160 LYS161 THR162 GLY163 TYR164 SER165 PHE166 GLY167 TYR168 ALA169 PHE170 VAL171 ASP172 PHE173 THR174 SER175 GLU176 MET177 ASP178 SER179 GLN180 ARG181 ALA182 ILE183 LYS184 VAL185 LEU186 ASN187 GLY188 ILE189 THR190 VAL191 ARG192 ASN193 LYS194 ARG195 LEU196 LYS197 VAL198 SER199 TYR200 ALA201 ARG202 PRO203 GLY204 GLY205 GLU206 SER207 ILE208 LYS209 ASP210 THR211 ASN212 LEU213 TYR214 VAL215 THR216 ASN217 LEU218 PRO219 ARG220 THR221 ILE222 THR223 ASP224 ASP225 GLN226 LEU227 ASP228 THR229 ILE230 PHE231 GLY232 LYS233 TYR234 GLY235 SER236 ILE237 VAL238 GLN239 LYS240 ASN241 ILE242 LEU243 ARG244 ASP245 LYS246 LEU247 THR248 GLY249 ARG250 PRO251 ARG252 GLY253 VAL254 ALA255 PHE256 VAL257 ARG258 TYR259 ASN260 LYS261 ARG262 GLU263 GLU264 ALA265 GLN266 GLU267 ALA268 ILE269 SER270 ALA271 LEU272 ASN273 ASN274 VAL275 ILE276 PRO277 GLU278 GLY279 GLY280 SER281 GLN282 PRO283 LEU284 SER285 VAL286 ARG287 LEU288 ALA289 GLU290 GLU291
Unit 4 SER123 ASN124 THR125 ASN126 LEU127 ILE128 VAL129 ASN130 TYR131 LEU132 PRO133 GLN134 ASP135 MET136 THR137 ASP138 ARG139 GLU140 LEU141 TYR142 ALA143 LEU144 PHE145 ARG146 ALA147 ILE148 GLY149 PRO150 ILE151 ASN152 THR153 CYS154 ARG155 ILE156 MET157 ARG158 ASP159 TYR160 LYS161 THR162 GLY163 TYR164 SER165 PHE166 GLY167 TYR168 ALA169 PHE170 VAL171 ASP172 PHE173 THR174 SER175 GLU176 MET177 ASP178 SER179 GLN180 ARG181 ALA182 ILE183 LYS184 VAL185 LEU186 ASN187 GLY188 ILE189 THR190 VAL191 ARG192 ASN193 LYS194 ARG195 LEU196 LYS197 VAL198 SER199 TYR200 ALA201 ARG202 PRO203 GLY204 GLY205 GLU206 SER207 ILE208 LYS209 ASP210 THR211 ASN212 LEU213 TYR214 VAL215 THR216 ASN217 LEU218 PRO219 ARG220 THR221 ILE222 THR223 ASP224 ASP225 GLN226 LEU227 ASP228 THR229 ILE230 PHE231 GLY232 LYS233 TYR234 GLY235 SER236 ILE237 VAL238 GLN239 LYS240 ASN241 ILE242 LEU243 ARG244 ASP245 LYS246 LEU247 THR248 GLY249 ARG250 PRO251 ARG252 GLY253 VAL254 ALA255 PHE256 VAL257 ARG258 TYR259 ASN260 LYS261 ARG262 GLU263 GLU264 ALA265 GLN266 GLU267 ALA268 ILE269 SER270 ALA271 LEU272 ASN273 ASN274 VAL275 ILE276 PRO277 GLU278 GLY279 GLY280 SER281 GLN282 PRO283 LEU284 SER285 VAL286 ARG287 LEU288 ALA289 GLU290 GLU291
Unit 5 GLY1 ALA2 MET3 ALA4 THR5 ARG6 GLU7 THR8 GLY9 ILE10 ILE11 GLU12 LYS13 LEU14 LEU15 HIS16 SER17 TYR18 GLY19 PHE20 ILE21 GLN22 CYS23 CYS24 GLU25 ARG26 GLN27 ALA28 ARG29 LEU30 PHE31 PHE32 HIS33 PHE34 SER35 GLN36 PHE37 SER38 GLY39 ASN40 ILE41 ASP42 HIS43 LEU44 LYS45 ILE46 GLY47 ASP48 PRO49 VAL50 GLU51 PHE52 GLU53 MET54 THR55 TYR56 ASP57 ARG58 ARG59 THR60 GLY61 LYS62 PRO63 ILE64 ALA65 SER66 GLN67 VAL68 SER69 LYS70 ILE71 ALA72
Unit 6 GLY1 ALA2 MET3 ALA4 THR5 ARG6 GLU7 THR8 GLY9 ILE10 ILE11 GLU12 LYS13 LEU14 LEU15 HIS16 SER17 TYR18 GLY19 PHE20 ILE21 GLN22 CYS23 CYS24 GLU25 ARG26 GLN27 ALA28 ARG29 LEU30 PHE31 PHE32 HIS33 PHE34 SER35 GLN36 PHE37 SER38 GLY39 ASN40 ILE41 ASP42 HIS43 LEU44 LYS45 ILE46 GLY47 ASP48 PRO49 VAL50 GLU51 PHE52 GLU53 MET54 THR55 TYR56 ASP57 ARG58 ARG59 THR60 GLY61 LYS62 PRO63 ILE64 ALA65 SER66 GLN67 VAL68 SER69 LYS70 ILE71 ALA72
Nucleic acids
Unit 1 U4 U5 U6 U7 U8 U9 U10 G11 A12 G13 C14 A15 C16 G17 U18 G19 A20
Unit 3 U4 U5 U6 U7 U8 U9 U10 G11 A12 G13 C14 A15 C16 G17 U18 G19 A20
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany