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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF THE PYOCIN S2 NUCLEASE DOMAIN, IMMU PROTEIN COMPLEX AT 1.8 ANGSTROMS
Keywords HNH NUCLEASE DOMAIN, COLICIN NUCLEASE IMMUNITY PROTEIN COMPL BACTERIOCIN, BACTERIAL CYTOTOXIN, ANTIMICROBIAL PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4QKO     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PYOCIN-S2 IMMUNITY PROTEIN  A 87 709 0
2  Protein   PYOCIN-S2  B 131 1006 0
3  Protein   PYOCIN-S2 IMMUNITY PROTEIN  C 87 709 0
4  Protein   PYOCIN-S2  D 133 1014 0
5  Protein   PYOCIN-S2 IMMUNITY PROTEIN  E 87 709 0
6  Protein   PYOCIN-S2  F 131 1006 0
7  Protein   PYOCIN-S2 IMMUNITY PROTEIN  G 86 697 0
8  Protein   PYOCIN-S2  H 131 1006 0
9  Ligand   PYOCIN-S2 IMMUNITY PROTEIN  A 3 0 3
10  Ligand   PYOCIN-S2  B 4 0 4
11  Ligand   PYOCIN-S2 IMMUNITY PROTEIN  C 3 0 3
12  Ligand   PYOCIN-S2  D 8 0 8
13  Ligand   PYOCIN-S2 IMMUNITY PROTEIN  E 3 0 3
14  Ligand   PYOCIN-S2  F 8 0 8
15  Ligand   PYOCIN-S2 IMMUNITY PROTEIN  G 3 0 3
16  Ligand   PYOCIN-S2  H 7 0 7
17 Water     815 0 815
total       1727 6856 854
Proteins
Unit 1 MET1 LYS2 SER3 LYS4 ILE5 SER6 GLU7 TYR8 THR9 GLU10 LYS11 GLU12 PHE13 LEU14 GLU15 PHE16 VAL17 LYS18 ASP19 ILE20 TYR21 THR22 ASN23 ASN24 LYS25 LYS26 LYS27 PHE28 PRO29 THR30 GLU31 GLU32 SER33 HIS34 ILE35 GLN36 ALA37 VAL38 LEU39 GLU40 PHE41 LYS42 LYS43 LEU44 THR45 GLU46 HIS47 PRO48 SER49 GLY50 SER51 ASP52 LEU53 LEU54 TYR55 TYR56 PRO57 ASN58 GLU59 ASN60 ARG61 GLU62 ASP63 SER64 PRO65 ALA66 GLY67 VAL68 VAL69 LYS70 GLU71 VAL72 LYS73 GLU74 TRP75 ARG76 ALA77 SER78 LYS79 GLY80 LEU81 PRO82 GLY83 PHE84 LYS85 ALA86 GLY87
Unit 2 ARG556 ASP557 PRO558 ARG559 ASP560 VAL561 PRO562 GLY563 ALA564 ALA565 THR566 GLY567 LYS568 GLY569 GLN570 PRO571 VAL572 SER573 GLY574 ASN575 TRP576 LEU577 GLY578 ALA579 ALA580 SER581 GLN582 GLY583 GLU584 GLY585 ALA586 PRO587 ILE588 PRO589 SER590 GLN591 ILE592 ALA593 ASP594 LYS595 LEU596 ARG597 GLY598 LYS599 THR600 PHE601 LYS602 ASN603 TRP604 ARG605 ASP606 PHE607 ARG608 GLU609 GLN610 PHE611 TRP612 ILE613 ALA614 VAL615 ALA616 ASN617 ASP618 PRO619 GLU620 LEU621 SER622 LYS623 GLN624 PHE625 ASN626 PRO627 GLY628 SER629 LEU630 ALA631 VAL632 MET633 ARG634 ASP635 GLY636 GLY637 ALA638 PRO639 TYR640 VAL641 ARG642 GLU643 SER644 GLU645 GLN646 ALA647 GLY648 GLY649 ARG650 ILE651 LYS652 ILE653 GLU654 ILE655 HIS656 HIS657 LYS658 VAL659 ARG660 ILE661 ALA662 ASP663 GLY664 GLY665 GLY666 VAL667 TYR668 ASN669 MET670 GLY671 ASN672 LEU673 VAL674 ALA675 VAL676 THR677 PRO678 LYS679 ARG680 HIS681 ILE682 GLU683 ILE684 HIS685 LYS686
Unit 3 MET1 LYS2 SER3 LYS4 ILE5 SER6 GLU7 TYR8 THR9 GLU10 LYS11 GLU12 PHE13 LEU14 GLU15 PHE16 VAL17 LYS18 ASP19 ILE20 TYR21 THR22 ASN23 ASN24 LYS25 LYS26 LYS27 PHE28 PRO29 THR30 GLU31 GLU32 SER33 HIS34 ILE35 GLN36 ALA37 VAL38 LEU39 GLU40 PHE41 LYS42 LYS43 LEU44 THR45 GLU46 HIS47 PRO48 SER49 GLY50 SER51 ASP52 LEU53 LEU54 TYR55 TYR56 PRO57 ASN58 GLU59 ASN60 ARG61 GLU62 ASP63 SER64 PRO65 ALA66 GLY67 VAL68 VAL69 LYS70 GLU71 VAL72 LYS73 GLU74 TRP75 ARG76 ALA77 SER78 LYS79 GLY80 LEU81 PRO82 GLY83 PHE84 LYS85 ALA86 GLY87
Unit 4 ARG556 ASP557 PRO558 ARG559 ASP560 VAL561 PRO562 GLY563 ALA564 ALA565 THR566 GLY567 LYS568 GLY569 GLN570 PRO571 VAL572 SER573 GLY574 ASN575 TRP576 LEU577 GLY578 ALA579 ALA580 SER581 GLN582 GLY583 GLU584 GLY585 ALA586 PRO587 ILE588 PRO589 SER590 GLN591 ILE592 ALA593 ASP594 LYS595 LEU596 ARG597 GLY598 LYS599 THR600 PHE601 LYS602 ASN603 TRP604 ARG605 ASP606 PHE607 ARG608 GLU609 GLN610 PHE611 TRP612 ILE613 ALA614 VAL615 ALA616 ASN617 ASP618 PRO619 GLU620 LEU621 SER622 LYS623 GLN624 PHE625 ASN626 PRO627 GLY628 SER629 LEU630 ALA631 VAL632 MET633 ARG634 ASP635 GLY636 GLY637 ALA638 PRO639 TYR640 VAL641 ARG642 GLU643 SER644 GLU645 GLN646 ALA647 GLY648 GLY649 ARG650 ILE651 LYS652 ILE653 GLU654 ILE655 HIS656 HIS657 LYS658 VAL659 ARG660 ILE661 ALA662 ASP663 GLY664 GLY665 GLY666 VAL667 TYR668 ASN669 MET670 GLY671 ASN672 LEU673 VAL674 ALA675 VAL676 THR677 PRO678 LYS679 ARG680 HIS681 ILE682 GLU683 ILE684 HIS685 LYS686 GLY687 GLY688
Unit 5 MET1 LYS2 SER3 LYS4 ILE5 SER6 GLU7 TYR8 THR9 GLU10 LYS11 GLU12 PHE13 LEU14 GLU15 PHE16 VAL17 LYS18 ASP19 ILE20 TYR21 THR22 ASN23 ASN24 LYS25 LYS26 LYS27 PHE28 PRO29 THR30 GLU31 GLU32 SER33 HIS34 ILE35 GLN36 ALA37 VAL38 LEU39 GLU40 PHE41 LYS42 LYS43 LEU44 THR45 GLU46 HIS47 PRO48 SER49 GLY50 SER51 ASP52 LEU53 LEU54 TYR55 TYR56 PRO57 ASN58 GLU59 ASN60 ARG61 GLU62 ASP63 SER64 PRO65 ALA66 GLY67 VAL68 VAL69 LYS70 GLU71 VAL72 LYS73 GLU74 TRP75 ARG76 ALA77 SER78 LYS79 GLY80 LEU81 PRO82 GLY83 PHE84 LYS85 ALA86 GLY87
Unit 6 ARG556 ASP557 PRO558 ARG559 ASP560 VAL561 PRO562 GLY563 ALA564 ALA565 THR566 GLY567 LYS568 GLY569 GLN570 PRO571 VAL572 SER573 GLY574 ASN575 TRP576 LEU577 GLY578 ALA579 ALA580 SER581 GLN582 GLY583 GLU584 GLY585 ALA586 PRO587 ILE588 PRO589 SER590 GLN591 ILE592 ALA593 ASP594 LYS595 LEU596 ARG597 GLY598 LYS599 THR600 PHE601 LYS602 ASN603 TRP604 ARG605 ASP606 PHE607 ARG608 GLU609 GLN610 PHE611 TRP612 ILE613 ALA614 VAL615 ALA616 ASN617 ASP618 PRO619 GLU620 LEU621 SER622 LYS623 GLN624 PHE625 ASN626 PRO627 GLY628 SER629 LEU630 ALA631 VAL632 MET633 ARG634 ASP635 GLY636 GLY637 ALA638 PRO639 TYR640 VAL641 ARG642 GLU643 SER644 GLU645 GLN646 ALA647 GLY648 GLY649 ARG650 ILE651 LYS652 ILE653 GLU654 ILE655 HIS656 HIS657 LYS658 VAL659 ARG660 ILE661 ALA662 ASP663 GLY664 GLY665 GLY666 VAL667 TYR668 ASN669 MET670 GLY671 ASN672 LEU673 VAL674 ALA675 VAL676 THR677 PRO678 LYS679 ARG680 HIS681 ILE682 GLU683 ILE684 HIS685 LYS686
Unit 7 LYS2 SER3 LYS4 ILE5 SER6 GLU7 TYR8 THR9 GLU10 LYS11 GLU12 PHE13 LEU14 GLU15 PHE16 VAL17 LYS18 ASP19 ILE20 TYR21 THR22 ASN23 ASN24 LYS25 LYS26 LYS27 PHE28 PRO29 THR30 GLU31 GLU32 SER33 HIS34 ILE35 GLN36 ALA37 VAL38 LEU39 GLU40 PHE41 LYS42 LYS43 LEU44 THR45 GLU46 HIS47 PRO48 SER49 GLY50 SER51 ASP52 LEU53 LEU54 TYR55 TYR56 PRO57 ASN58 GLU59 ASN60 ARG61 GLU62 ASP63 SER64 PRO65 ALA66 GLY67 VAL68 VAL69 LYS70 GLU71 VAL72 LYS73 GLU74 TRP75 ARG76 ALA77 SER78 LYS79 GLY80 LEU81 PRO82 GLY83 PHE84 LYS85 ALA86 GLY87
Unit 8 ARG556 ASP557 PRO558 ARG559 ASP560 VAL561 PRO562 GLY563 ALA564 ALA565 THR566 GLY567 LYS568 GLY569 GLN570 PRO571 VAL572 SER573 GLY574 ASN575 TRP576 LEU577 GLY578 ALA579 ALA580 SER581 GLN582 GLY583 GLU584 GLY585 ALA586 PRO587 ILE588 PRO589 SER590 GLN591 ILE592 ALA593 ASP594 LYS595 LEU596 ARG597 GLY598 LYS599 THR600 PHE601 LYS602 ASN603 TRP604 ARG605 ASP606 PHE607 ARG608 GLU609 GLN610 PHE611 TRP612 ILE613 ALA614 VAL615 ALA616 ASN617 ASP618 PRO619 GLU620 LEU621 SER622 LYS623 GLN624 PHE625 ASN626 PRO627 GLY628 SER629 LEU630 ALA631 VAL632 MET633 ARG634 ASP635 GLY636 GLY637 ALA638 PRO639 TYR640 VAL641 ARG642 GLU643 SER644 GLU645 GLN646 ALA647 GLY648 GLY649 ARG650 ILE651 LYS652 ILE653 GLU654 ILE655 HIS656 HIS657 LYS658 VAL659 ARG660 ILE661 ALA662 ASP663 GLY664 GLY665 GLY666 VAL667 TYR668 ASN669 MET670 GLY671 ASN672 LEU673 VAL674 ALA675 VAL676 THR677 PRO678 LYS679 ARG680 HIS681 ILE682 GLU683 ILE684 HIS685 LYS686
Ligands
Unit 9 BR101 BR102 BR103
Unit 10 BR701 BR702 BR703 MG704
Unit 11 BR101 BR102 BR103
Unit 12 BR701 BR702 BR703 BR704 BR705 BR706 MG707 BR708
Unit 13 BR101 BR102 BR103
Unit 14 BR701 BR702 BR703 BR704 BR705 BR706 MG707 BR708
Unit 15 BR101 BR102 BR103
Unit 16 BR701 BR702 BR703 BR704 BR705 BR706 MG707
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany