4QIK - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE ROQ DOMAIN OF HUMAN ROQUIN IN COMPL THE TNF23 RNA DUPLEX
• Keywords: RNA DUPLEX, WINGED-HELIX MOTIF, MRNA SECONDARY STRUCTURE, MR IMMUNE RESPONSES, AUTOIMMUNITY, RNA BINDING PROTEIN-RNA COM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4QIK	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ROQUIN-1	A	302	2334	48
2	Protein	ROQUIN-1	B	297	2311	48
3	RNA		C	18	382	0
4	RNA		D	18	385	0
5	Ligand	ROQUIN-1	A	8	0	8
6	Ligand	ROQUIN-1	B	7	0	12
7	Water			885	0	885
total				1535	5412	1001

Proteins

Unit 1

GLY 89 VAL 90 GLU 91 ASP 92 THR 93 LYS 94 HIS 95 TYR 96 GLU 97 GLU 98 ALA 99 LYS 100 LYS 101 CYS 102 VAL 103 GLU 104 GLU 105 LEU 106 ALA 107 LEU 108 TYR 109 LEU 110 LYS 111 PRO 112 LEU 113 SER 114 SER 115 ALA 116 ARG 117 GLY 118 VAL 119 GLY 120 LEU 121 ASN 122 SER 123 THR 124 THR 125 GLN 126 SER 127 VAL 128 LEU 129 SER 130 ARG 131 PRO 132 MSE 133 GLN 134 ARG 135 LYS 136 LEU 137 VAL 138 THR 139 LEU 140 VAL 141 HIS 142 CYS 143 GLN 144 LEU 145 VAL 146 GLU 147 GLU 148 GLU 149 GLY 150 ARG 151 ILE 152 ARG 153 ALA 154 MSE 155 ARG 156 ALA 157 ALA 158 ARG 159 SER 160 LEU 161 GLY 162 GLU 163 ARG 164 THR 165 VAL 166 THR 167 GLU 168 LEU 169 ILE 170 LEU 171 GLN 172 HIS 173 GLN 174 ASN 175 PRO 176 GLN 177 GLN 178 LEU 179 SER 180 SER 181 ASN 182 LEU 183 TRP 184 ALA 185 ALA 186 VAL 187 ARG 188 ALA 189 ARG 190 GLY 191 CYS 192 GLN 193 PHE 194 LEU 195 GLY 196 PRO 197 ALA 198 MSE 199 GLN 200 GLU 201 GLU 202 ALA 203 LEU 204 LYS 205 LEU 206 VAL 207 LEU 208 LEU 209 ALA 210 LEU 211 GLU 212 ASP 213 GLY 214 SER 215 ALA 216 LEU 217 SER 218 ARG 219 LYS 220 VAL 221 LEU 222 VAL 223 LEU 224 PHE 225 VAL 226 VAL 227 GLN 228 ARG 229 LEU 230 GLU 231 PRO 232 ARG 233 PHE 234 PRO 235 GLN 236 ALA 237 SER 238 LYS 239 THR 240 SER 241 ILE 242 GLY 243 HIS 244 VAL 245 VAL 246 GLN 247 LEU 248 LEU 249 TYR 250 ARG 251 ALA 252 SER 253 CYS 254 PHE 255 LYS 256 SER 265 LEU 266 MSE 267 GLN 268 LEU 269 LYS 270 GLU 271 GLU 272 PHE 273 ARG 274 THR 275 TYR 276 GLU 277 ALA 278 LEU 279 ARG 280 ARG 281 GLU 282 HIS 283 ASP 284 SER 285 GLN 286 ILE 287 VAL 288 GLN 289 ILE 290 ALA 291 MSE 292 GLU 293 ALA 294 GLY 295 LEU 296 ARG 297 ILE 298 ALA 299 PRO 300 ASP 301 GLN 302 TRP 303 SER 304 SER 305 LEU 306 LEU 307 TYR 308 GLY 309 ASP 310 GLN 311 SER 312 HIS 313 LYS 314 SER 315 HIS 316 MSE 317 GLN 318 SER 319 ILE 320 ILE 321 ASP 322 LYS 323 LEU 324 GLN 325 THR 326 PRO 327 ALA 328 SER 329 PHE 330 ALA 331 GLN 332 SER 333 VAL 334 GLN 335 GLU 336 LEU 337 THR 338 ILE 339 ALA 340 LEU 341 GLN 342 ARG 343 THR 344 GLY 345 ASP 346 PRO 347 ALA 348 ASN 349 LEU 350 ASN 351 ARG 352 LEU 353 ARG 354 PRO 355 HIS 356 LEU 357 GLU 358 LEU 359 LEU 360 ALA 361 ASN 362 ILE 363 ASP 364 PRO 365 SER 366 PRO 367 ASP 368 ALA 369 PRO 370 PRO 371 PRO 372 THR 373 TRP 374 GLU 375 GLN 376 LEU 377 GLU 378 ASN 379 GLY 380 LEU 381 VAL 382 ALA 383 VAL 384 ARG 385 THR 386 VAL 387 VAL 388 HIS 389 GLY 390 LEU 391 VAL 392 ASP 393 TYR 394 ILE 395 GLN 396 ASN 397 HIS 398

Unit 2

SER 88 GLY 89 VAL 90 GLU 91 ASP 92 THR 93 LYS 94 HIS 95 TYR 96 GLU 97 GLU 98 ALA 99 LYS 100 LYS 101 CYS 102 VAL 103 GLU 104 GLU 105 LEU 106 ALA 107 LEU 108 TYR 109 LEU 110 LYS 111 PRO 112 LEU 113 VAL 128 LEU 129 SER 130 ARG 131 PRO 132 MSE 133 GLN 134 ARG 135 LYS 136 LEU 137 VAL 138 THR 139 LEU 140 VAL 141 HIS 142 CYS 143 GLN 144 LEU 145 VAL 146 GLU 147 GLU 148 GLU 149 GLY 150 ARG 151 ILE 152 ARG 153 ALA 154 MSE 155 ARG 156 ALA 157 ALA 158 ARG 159 SER 160 LEU 161 GLY 162 GLU 163 ARG 164 THR 165 VAL 166 THR 167 GLU 168 LEU 169 ILE 170 LEU 171 GLN 172 HIS 173 GLN 174 ASN 175 PRO 176 GLN 177 GLN 178 LEU 179 SER 180 SER 181 ASN 182 LEU 183 TRP 184 ALA 185 ALA 186 VAL 187 ARG 188 ALA 189 ARG 190 GLY 191 CYS 192 GLN 193 PHE 194 LEU 195 GLY 196 PRO 197 ALA 198 MSE 199 GLN 200 GLU 201 GLU 202 ALA 203 LEU 204 LYS 205 LEU 206 VAL 207 LEU 208 LEU 209 ALA 210 LEU 211 GLU 212 ASP 213 GLY 214 SER 215 ALA 216 LEU 217 SER 218 ARG 219 LYS 220 VAL 221 LEU 222 VAL 223 LEU 224 PHE 225 VAL 226 VAL 227 GLN 228 ARG 229 LEU 230 GLU 231 PRO 232 ARG 233 PHE 234 PRO 235 GLN 236 ALA 237 SER 238 LYS 239 THR 240 SER 241 ILE 242 GLY 243 HIS 244 VAL 245 VAL 246 GLN 247 LEU 248 LEU 249 TYR 250 ARG 251 ALA 252 SER 253 CYS 254 PHE 255 LYS 256 VAL 257 THR 258 LYS 259 ARG 260 ASP 261 GLU 262 ASP 263 SER 264 SER 265 LEU 266 MSE 267 GLN 268 LEU 269 LYS 270 GLU 271 GLU 272 PHE 273 ARG 274 THR 275 TYR 276 GLU 277 ALA 278 LEU 279 ARG 280 ARG 281 GLU 282 HIS 283 ASP 284 SER 285 GLN 286 ILE 287 VAL 288 GLN 289 ILE 290 ALA 291 MSE 292 GLU 293 ALA 294 GLY 295 LEU 296 ARG 297 ILE 298 ALA 299 PRO 300 ASP 301 GLN 302 TRP 303 SER 304 SER 305 LEU 306 LEU 307 TYR 308 GLY 309 ASP 310 GLN 311 SER 312 HIS 313 LYS 314 SER 315 HIS 316 MSE 317 GLN 318 SER 319 ILE 320 ILE 321 ASP 322 LYS 323 LEU 324 GLN 325 THR 326 PRO 327 ALA 328 SER 329 PHE 330 ALA 331 GLN 332 SER 333 VAL 334 GLN 335 GLU 336 LEU 337 THR 338 ILE 339 ALA 340 LEU 341 GLN 342 ARG 343 THR 344 GLY 345 ASP 346 PRO 347 ALA 348 ASN 349 LEU 350 ASN 351 ARG 352 LEU 353 ARG 354 PRO 355 HIS 356 LEU 357 GLU 358 LEU 359 LEU 360 ALA 361 ASN 362 ILE 363 ASP 364 PRO 365 SER 366 PRO 367 ASP 368 ALA 369 PRO 370 PRO 371 PRO 372 THR 373 TRP 374 GLU 375 GLN 376 LEU 377 GLU 378 ASN 379 GLY 380 LEU 381 VAL 382 ALA 383 VAL 384 ARG 385 THR 386 VAL 387 VAL 388 HIS 389 GLY 390 LEU 391 VAL 392 ASP 393 TYR 394 ILE 395 GLN 396 ASN 397 HIS 398

Nucleic acids

Unit 3	A 3 U 4 G 5 U 6 U 7 U 8 U 9 C 10 U 11 G 12 G 14 A 15 A 16 A 17 A 18 C 19 G 20 G 21
Unit 4	G 5 U 6 U 7 U 8 U 9 C 10 U 11 G 12 U 13 G 14 A 15 A 16 A 17 A 18 C 19 G 20 G 21 A 22

Ligands

Unit 5	CL 501 CL 502 CL 503 CL 504 CL 505 CL 506 CL 507 CL 508
Unit 6	CL 501 CL 502 CL 503 CL 504 CL 505 CL 506 GOL 507