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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PDUA WITH EDGE MUTATION K26A AND PORE M S40H
Keywords BMC DOMAIN, STRUCTURAL PROTEIN, POTASSIUM, GLYCEROL, 1-2 PRO TARTARIC ACID, SULFATE ION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4QIF     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  A 91 646 0
2  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  B 86 607 0
3  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  C 90 630 0
4  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  D 88 625 0
5  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  E 86 603 0
6  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  F 91 639 0
7  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  G 84 588 0
8  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  H 91 645 0
9  Protein   PROPANEDIOL UTILIZATION PROTEIN PDUA  I 84 588 0
10  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  A 5 0 25
11  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  B 3 0 12
12  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  C 1 0 5
13  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  B 1 0 5
14  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  C 1 0 5
15  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  D 4 0 31
16  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  E 3 0 17
17  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  F 3 0 17
18  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  G 3 0 21
19  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  H 3 0 16
20  Ligand   PROPANEDIOL UTILIZATION PROTEIN PDUA  I 1 0 5
21 Water     300 0 300
total       1119 5571 459

Proteins
Unit 1 GLN2 GLN3 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87 LEU88 PRO89 LYS90 GLY91 ILE92
Unit 2 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87 LEU88 PRO89
Unit 3 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87 LEU88 PRO89 LYS90 GLY91 ILE92 SER93
Unit 4 GLN3 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87 LEU88 PRO89 LYS90
Unit 5 GLN3 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87 LEU88
Unit 6 GLN3 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87 LEU88 PRO89 LYS90 GLY91 ILE92 SER93
Unit 7 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87
Unit 8 THR1 GLN2 GLN3 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87 LEU88 PRO89 LYS90 GLY91
Unit 9 GLU4 ALA5 LEU6 GLY7 MET8 VAL9 GLU10 THR11 LYS12 GLY13 LEU14 THR15 ALA16 ALA17 ILE18 GLU19 ALA20 ALA21 ASP22 ALA23 MET24 VAL25 ALA26 SER27 ALA28 ASN29 VAL30 MET31 LEU32 VAL33 GLY34 TYR35 GLU36 LYS37 ILE38 GLY39 HIS40 GLY41 LEU42 VAL43 THR44 VAL45 ILE46 VAL47 ARG48 GLY49 ASP50 VAL51 GLY52 ALA53 VAL54 LYS55 ALA56 ALA57 THR58 ASP59 ALA60 GLY61 ALA62 ALA63 ALA64 ALA65 ARG66 ASN67 VAL68 GLY69 GLU70 VAL71 LYS72 ALA73 VAL74 HIS75 VAL76 ILE77 PRO78 ARG79 PRO80 HIS81 THR82 ASP83 VAL84 GLU85 LYS86 ILE87

Ligands
Unit 10 PGO101 SO4102 SO4103 SO4104 SO4105
Unit 11 K101 GOL102 SO4103
Unit 12 SO4101
Unit 13 SO4104
Unit 14 PGO102
Unit 15 TAR101 TAR102 GOL103 SO4104
Unit 16 GOL101 GOL102 SO4103
Unit 17 SO4101 GOL102 GOL103
Unit 18 TAR101 GOL102 SO4103
Unit 19 GOL101 SO4102 SO4103
Unit 20 PGO101

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany