4Q3E - Sequence, Chains, Asymmetric and Biological Units

• Title: PYLD COCRYSTALLIZED WITH L-ORNITHINE-ND-D-LYSINE AND NAD+
• Keywords: ROSSMANN FOLD, DEHYDROGENASE, PYRROLYSINE, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4Q3E	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PYLD, PYRROLYSINE SYNTHASE	A	253	1919	0
2	Protein	PYLD, PYRROLYSINE SYNTHASE	B	255	1925	0
3	Ligand	PYLD, PYRROLYSINE SYNTHASE	A	7	0	77
4	Ligand	PYLD, PYRROLYSINE SYNTHASE	B	6	0	74
5	Water			192	0	192
total				713	3844	343

Proteins

Unit 1

LEU 3 LEU 4 THR 5 PRO 6 ASP 7 ASP 8 LEU 9 ILE 10 ASN 11 ILE 12 ASN 13 MET 14 GLN 15 LEU 16 GLN 17 LYS 18 ALA 19 ASP 20 SER 21 ALA 22 VAL 23 GLN 24 GLU 25 VAL 26 THR 27 GLY 28 LEU 29 ASP 30 ILE 31 LYS 32 GLY 33 ILE 34 CYS 35 LYS 36 ALA 37 LEU 38 TYR 39 GLY 40 THR 41 PHE 42 SER 43 SER 44 SER 45 GLU 46 LYS 47 VAL 48 GLY 49 ILE 50 VAL 51 PRO 52 VAL 53 THR 54 SER 55 ILE 60 GLY 61 ASN 62 PHE 63 SER 64 ALA 65 SER 66 LEU 67 HIS 68 ALA 69 ILE 70 THR 71 GLN 72 TYR 73 PHE 74 GLY 75 PHE 76 ASP 77 SER 78 PHE 79 VAL 80 THR 81 ASP 82 MET 83 PRO 84 ASP 85 VAL 86 SER 87 GLY 88 TYR 89 TYR 90 GLU 91 ALA 92 VAL 93 GLN 94 ASN 95 GLY 96 ALA 97 GLU 98 ILE 99 ILE 100 LEU 101 MET 102 ALA 103 ASP 104 ASP 105 ARG 106 THR 107 PHE 108 LEU 109 ALA 110 HIS 111 ASN 112 LEU 113 LYS 114 ASN 115 GLY 116 LYS 117 MET 118 ALA 119 ASN 120 ASN 121 GLN 122 PRO 123 CYS 124 THR 125 GLY 126 ILE 127 ILE 128 TYR 129 ALA 130 GLU 131 ILE 132 ALA 133 SER 134 ARG 135 TYR 136 LEU 137 LYS 138 ALA 139 ASP 140 SER 141 LYS 142 ASP 143 VAL 144 LEU 145 VAL 146 VAL 147 GLY 148 LEU 149 GLY 150 LYS 151 VAL 152 GLY 153 PHE 154 PRO 155 GLY 156 ALA 157 GLU 158 HIS 159 LEU 160 VAL 161 GLN 162 LYS 163 ASP 164 PHE 165 ARG 166 VAL 167 TYR 168 GLY 169 TYR 170 ASP 171 ALA 172 ASP 173 GLU 174 THR 175 LEU 176 LEU 177 GLU 178 ARG 179 ALA 180 THR 181 SER 182 ASN 183 LEU 184 GLY 185 ILE 186 ILE 187 PRO 188 PHE 189 ASP 190 PRO 191 ALA 192 ASN 193 PRO 194 LYS 195 LYS 196 PHE 197 SER 198 ILE 199 ILE 200 PHE 201 GLU 202 ALA 203 THR 204 PRO 205 CYS 206 ALA 207 ASN 208 THR 209 ILE 210 PRO 211 GLU 212 ALA 213 VAL 214 LEU 215 SER 216 GLU 217 ASN 218 CYS 219 VAL 220 LEU 221 SER 222 THR 223 PRO 224 GLY 225 ILE 226 PRO 227 CYS 228 ALA 229 ILE 230 SER 231 GLU 232 GLU 233 LEU 234 ARG 235 ASP 236 LYS 237 TYR 238 GLU 239 VAL 240 GLN 241 LEU 242 ILE 243 ALA 244 GLU 245 PRO 246 LEU 247 GLY 248 ILE 249 GLY 250 THR 251 ALA 252 SER 253 MET 254 LEU 255 TYR 256 SER 257 VAL 258 LEU 259

Unit 2

THR 5 PRO 6 ASP 7 ASP 8 LEU 9 ILE 10 ASN 11 ILE 12 ASN 13 MET 14 GLN 15 LEU 16 GLN 17 LYS 18 ALA 19 ASP 20 SER 21 ALA 22 VAL 23 GLN 24 GLU 25 VAL 26 THR 27 GLY 28 LEU 29 ASP 30 ILE 31 LYS 32 GLY 33 ILE 34 CYS 35 LYS 36 ALA 37 LEU 38 TYR 39 GLY 40 THR 41 PHE 42 SER 43 SER 44 SER 45 GLU 46 LYS 47 VAL 48 GLY 49 ILE 50 VAL 51 PRO 52 VAL 53 THR 54 SER 55 GLY 56 ASN 57 GLY 58 ILE 59 ILE 60 GLY 61 ASN 62 PHE 63 SER 64 ALA 65 SER 66 LEU 67 HIS 68 ALA 69 ILE 70 THR 71 GLN 72 TYR 73 PHE 74 GLY 75 PHE 76 ASP 77 SER 78 PHE 79 VAL 80 THR 81 ASP 82 MET 83 PRO 84 ASP 85 VAL 86 SER 87 GLY 88 TYR 89 TYR 90 GLU 91 ALA 92 VAL 93 GLN 94 ASN 95 GLY 96 ALA 97 GLU 98 ILE 99 ILE 100 LEU 101 MET 102 ALA 103 ASP 104 ASP 105 ARG 106 THR 107 PHE 108 LEU 109 ALA 110 HIS 111 ASN 112 LEU 113 LYS 114 ASN 115 GLY 116 LYS 117 MET 118 ALA 119 ASN 120 ASN 121 GLN 122 PRO 123 CYS 124 THR 125 GLY 126 ILE 127 ILE 128 TYR 129 ALA 130 GLU 131 ILE 132 ALA 133 SER 134 ARG 135 TYR 136 LEU 137 LYS 138 ALA 139 ASP 140 SER 141 LYS 142 ASP 143 VAL 144 LEU 145 VAL 146 VAL 147 GLY 148 LEU 149 GLY 150 LYS 151 VAL 152 GLY 153 PHE 154 PRO 155 GLY 156 ALA 157 GLU 158 HIS 159 LEU 160 VAL 161 GLN 162 LYS 163 ASP 164 PHE 165 ARG 166 VAL 167 TYR 168 GLY 169 TYR 170 ASP 171 ALA 172 ASP 173 GLU 174 THR 175 LEU 176 LEU 177 GLU 178 ARG 179 ALA 180 THR 181 SER 182 ASN 183 LEU 184 GLY 185 ILE 186 ILE 187 PRO 188 PHE 189 ASP 190 PRO 191 ALA 192 ASN 193 PRO 194 LYS 195 LYS 196 PHE 197 SER 198 ILE 199 ILE 200 PHE 201 GLU 202 ALA 203 THR 204 PRO 205 CYS 206 ALA 207 ASN 208 THR 209 ILE 210 PRO 211 GLU 212 ALA 213 VAL 214 LEU 215 SER 216 GLU 217 ASN 218 CYS 219 VAL 220 LEU 221 SER 222 THR 223 PRO 224 GLY 225 ILE 226 PRO 227 CYS 228 ALA 229 ILE 230 SER 231 GLU 232 GLU 233 LEU 234 ARG 235 ASP 236 LYS 237 TYR 238 GLU 239 VAL 240 GLN 241 LEU 242 ILE 243 ALA 244 GLU 245 PRO 246 LEU 247 GLY 248 ILE 249 GLY 250 THR 251 ALA 252 SER 253 MET 254 LEU 255 TYR 256 SER 257 VAL 258 LEU 259

Ligands

Unit 3	NAD 901 NA 902 MG 903 2YJ 904 EDO 905 EDO 906 SO4 907
Unit 4	NAD 901 NA 902 MG 903 2YJ 904 GOL 905 EDO 906