4PY5 - Sequence, Chains, Asymmetric and Biological Units

• Title: THERMOVIBRIO AMMONIFICANS RNASE H3 IN COMPLEX WITH 19-MER RN
• Keywords: RNASE H FOLD, RNA/DNA HYBRID, HYDROLASE-DNA-RNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4PY5	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RIBONUCLEASE	A	267	2025	0
2	RNA		B	19	400	0
3	Other macromolecule	5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*C *C)-3'	C	19	388	0
4	Ligand	RIBONUCLEASE	A	8	0	37
5	Ligand	5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*C *C)-3'	C	1	0	5
6	Water			187	0	187
total				501	2813	229

Proteins

Unit 1

SER 0 MET 1 LYS 2 LEU 3 SER 4 SER 5 SER 6 GLU 7 LYS 8 GLU 9 LYS 10 LEU 11 LEU 12 LYS 13 LYS 14 LEU 15 LYS 16 ALA 17 LEU 18 GLY 19 ALA 20 LYS 21 GLU 22 GLU 23 LYS 24 PRO 25 PRO 26 GLU 27 HIS 28 ALA 29 GLN 30 TYR 31 ARG 32 LEU 33 ARG 34 LEU 35 ASN 36 ASP 37 ALA 38 ILE 39 LEU 40 THR 41 VAL 42 TYR 43 LYS 44 SER 45 GLY 46 SER 47 VAL 48 VAL 49 TYR 50 GLY 51 GLY 52 LYS 53 GLY 54 ARG 55 GLU 56 LYS 57 LEU 58 LYS 59 GLU 60 LEU 61 VAL 62 ALA 63 GLU 64 THR 65 VAL 66 LEU 67 SER 68 ASP 69 THR 70 GLU 71 LEU 72 PRO 73 ARG 74 ILE 75 GLY 76 CYS 77 ASN 78 GLU 79 ALA 80 GLY 81 LYS 82 GLY 83 GLU 84 PHE 85 VAL 86 GLY 87 PRO 88 LEU 89 VAL 90 VAL 91 ALA 92 CYS 93 ILE 94 VAL 95 ALA 96 ASP 97 GLU 98 LYS 99 CYS 100 LEU 101 LYS 102 ARG 103 LEU 104 ILE 105 GLU 106 LEU 107 GLY 108 VAL 109 LYS 110 ASP 111 SER 112 LYS 113 LYS 114 LEU 115 SER 116 ASN 117 GLU 118 LYS 119 VAL 120 GLU 121 GLU 122 LEU 123 ALA 124 SER 125 GLU 126 ILE 127 THR 128 GLU 129 THR 130 CYS 131 HIS 132 GLY 133 LYS 134 VAL 135 LYS 136 LEU 137 LEU 138 ILE 139 PRO 140 GLU 141 LYS 142 TYR 143 ASN 144 ARG 145 ALA 146 TYR 147 SER 148 LYS 149 PHE 150 LYS 151 ASN 152 ILE 153 ASN 154 ARG 155 LEU 156 LEU 157 GLU 158 ALA 159 VAL 160 TYR 161 ARG 162 GLU 163 ILE 164 VAL 165 SER 166 ASP 167 LEU 168 CYS 169 GLU 170 LYS 171 PHE 172 SER 173 PRO 174 LYS 175 VAL 176 VAL 177 VAL 178 VAL 179 ASP 180 LYS 181 PHE 182 SER 183 ASN 184 ARG 185 ALA 186 GLU 187 GLU 188 VAL 189 LEU 190 LYS 191 ASP 192 VAL 193 VAL 194 LYS 195 GLY 196 ALA 197 ARG 198 LEU 199 GLU 200 VAL 201 ARG 202 PRO 203 LYS 204 ALA 205 GLU 206 ASP 207 ASP 208 LEU 209 ALA 210 VAL 211 ALA 212 ALA 213 ALA 214 SER 215 ILE 216 VAL 217 ALA 218 LYS 219 ALA 220 VAL 221 ARG 222 LEU 223 LYS 224 THR 225 MET 226 LYS 227 GLU 228 LEU 229 GLU 230 LYS 231 ARG 232 PHE 233 LYS 234 VAL 235 LYS 236 LEU 237 PRO 238 GLU 239 GLY 240 ASN 241 THR 242 GLY 243 LEU 244 ALA 245 GLU 246 LEU 247 LEU 248 LYS 249 LYS 250 THR 251 PRO 252 LYS 253 GLU 254 LEU 255 HIS 256 GLU 257 LYS 258 LEU 259 PHE 260 LYS 261 LEU 262 HIS 263 PHE 264 SER 265 VAL 266

Nucleic acids

Unit 2

G 1 A 2 G 3 U 4 G 5 C 6 G 7 A 8 C 9 A 10 C 11 C 12 U 13 G 14 A 15 U 16 U 17 C 18 C 19

Other macromolecules

Unit 3

DG 1 DG 2 DA 3 DA 4 DT 5 DC 6 DA 7 DG 8 DG 9 DT 10 DG 11 DT 12 DC 13 DG 14 DC 15 DA 16 DC 17 DT 18 DC 19

Ligands

Unit 4	MG 301 SO4 302 SO4 303 SO4 304 SO4 305 SO4 306 SO4 307 GOL 308
Unit 5	SO4 101