Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF UHRF2-SRA IN COMPLEX WITH A 5HMC-CONTAINING DNA I
Keywords SRA, 5HMC BINDING, 5HMC-CONTAINING DNA, HYDROXYMETHYLATION, LIGASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4PW5     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   E3 UBIQUITIN-PROTEIN LIGASE UHRF2  A 189 1491 0
2  Protein   E3 UBIQUITIN-PROTEIN LIGASE UHRF2  B 188 1487 0
3  Other macromolecule   5HMC-CONTAINING DNA1  C 12 229 21
4  Other macromolecule   5HMC-CONTAINING DNA2  D 11 222 0
5  Protein   E3 UBIQUITIN-PROTEIN LIGASE UHRF2  E 188 1483 0
6  Protein   E3 UBIQUITIN-PROTEIN LIGASE UHRF2  F 187 1479 0
7  Other macromolecule   5HMC-CONTAINING DNA1  G 12 229 21
8  Other macromolecule   5HMC-CONTAINING DNA2  H 11 222 0
9 Water     609 0 609
total       1407 6842 651
Proteins
Unit 1 ILE441 VAL442 PRO443 SER444 ASN445 HIS446 TYR447 GLY448 PRO449 ILE450 PRO451 GLY452 ILE453 PRO454 VAL455 GLY456 SER457 THR458 TRP459 ARG460 PHE461 ARG462 VAL463 GLN464 VAL465 SER466 GLU467 ALA468 GLY469 VAL470 HIS471 ARG472 PRO473 HIS474 VAL475 GLY476 GLY477 ILE478 HIS479 GLY480 ARG481 SER482 ASN483 ASP484 GLY485 ALA486 TYR487 SER488 LEU489 VAL490 LEU491 ALA492 GLY493 GLY494 PHE495 ALA496 ASP497 GLU498 VAL499 ASP500 ARG501 GLY502 ASP503 GLU504 PHE505 THR506 TYR507 THR508 GLY509 SER510 GLY511 GLY512 SER525 ALA526 ASP527 GLN528 THR529 LEU530 THR531 ASN532 MET533 ASN534 ARG535 ALA536 LEU537 ALA538 LEU539 ASN540 CYS541 ASP542 ALA543 PRO544 LEU545 ASP546 ASP547 LYS548 ILE549 GLY550 ALA551 GLU552 SER553 ARG554 ASN555 TRP556 ARG557 ALA558 GLY559 LYS560 PRO561 VAL562 ARG563 VAL564 ILE565 ARG566 SER567 PHE568 LYS569 GLY570 ARG571 LYS572 ILE573 SER574 LYS575 TYR576 ALA577 PRO578 GLU579 GLU580 GLY581 ASN582 ARG583 TYR584 ASP585 GLY586 ILE587 TYR588 LYS589 VAL590 VAL591 LYS592 TYR593 TRP594 PRO595 GLU596 ILE597 SER598 SER599 SER600 HIS601 GLY602 PHE603 LEU604 VAL605 TRP606 ARG607 TYR608 LEU609 LEU610 ARG611 ARG612 ASP613 ASP614 VAL615 GLU616 PRO617 ALA618 PRO619 TRP620 THR621 SER622 GLU623 GLY624 ILE625 GLU626 ARG627 SER628 ARG629 ARG630 LEU631 CYS632 LEU633 ARG634 LEU635 GLN636 TYR637 PRO638 ALA639 GLY640 TYR641
Unit 2 ILE441 VAL442 PRO443 SER444 ASN445 HIS446 TYR447 GLY448 PRO449 ILE450 PRO451 GLY452 ILE453 PRO454 VAL455 GLY456 SER457 THR458 TRP459 ARG460 PHE461 ARG462 VAL463 GLN464 VAL465 SER466 GLU467 ALA468 GLY469 VAL470 HIS471 ARG472 PRO473 HIS474 VAL475 GLY476 GLY477 ILE478 HIS479 GLY480 ARG481 SER482 ASN483 ASP484 GLY485 ALA486 TYR487 SER488 LEU489 VAL490 LEU491 ALA492 GLY493 GLY494 PHE495 ALA496 ASP497 GLU498 VAL499 ASP500 ARG501 GLY502 ASP503 GLU504 PHE505 THR506 TYR507 THR508 GLY509 SER510 GLY511 SER525 ALA526 ASP527 GLN528 THR529 LEU530 THR531 ASN532 MET533 ASN534 ARG535 ALA536 LEU537 ALA538 LEU539 ASN540 CYS541 ASP542 ALA543 PRO544 LEU545 ASP546 ASP547 LYS548 ILE549 GLY550 ALA551 GLU552 SER553 ARG554 ASN555 TRP556 ARG557 ALA558 GLY559 LYS560 PRO561 VAL562 ARG563 VAL564 ILE565 ARG566 SER567 PHE568 LYS569 GLY570 ARG571 LYS572 ILE573 SER574 LYS575 TYR576 ALA577 PRO578 GLU579 GLU580 GLY581 ASN582 ARG583 TYR584 ASP585 GLY586 ILE587 TYR588 LYS589 VAL590 VAL591 LYS592 TYR593 TRP594 PRO595 GLU596 ILE597 SER598 SER599 SER600 HIS601 GLY602 PHE603 LEU604 VAL605 TRP606 ARG607 TYR608 LEU609 LEU610 ARG611 ARG612 ASP613 ASP614 VAL615 GLU616 PRO617 ALA618 PRO619 TRP620 THR621 SER622 GLU623 GLY624 ILE625 GLU626 ARG627 SER628 ARG629 ARG630 LEU631 CYS632 LEU633 ARG634 LEU635 GLN636 TYR637 PRO638 ALA639 GLY640 TYR641
Unit 5 VAL442 PRO443 SER444 ASN445 HIS446 TYR447 GLY448 PRO449 ILE450 PRO451 GLY452 ILE453 PRO454 VAL455 GLY456 SER457 THR458 TRP459 ARG460 PHE461 ARG462 VAL463 GLN464 VAL465 SER466 GLU467 ALA468 GLY469 VAL470 HIS471 ARG472 PRO473 HIS474 VAL475 GLY476 GLY477 ILE478 HIS479 GLY480 ARG481 SER482 ASN483 ASP484 GLY485 ALA486 TYR487 SER488 LEU489 VAL490 LEU491 ALA492 GLY493 GLY494 PHE495 ALA496 ASP497 GLU498 VAL499 ASP500 ARG501 GLY502 ASP503 GLU504 PHE505 THR506 TYR507 THR508 GLY509 SER510 GLY511 GLY512 SER525 ALA526 ASP527 GLN528 THR529 LEU530 THR531 ASN532 MET533 ASN534 ARG535 ALA536 LEU537 ALA538 LEU539 ASN540 CYS541 ASP542 ALA543 PRO544 LEU545 ASP546 ASP547 LYS548 ILE549 GLY550 ALA551 GLU552 SER553 ARG554 ASN555 TRP556 ARG557 ALA558 GLY559 LYS560 PRO561 VAL562 ARG563 VAL564 ILE565 ARG566 SER567 PHE568 LYS569 GLY570 ARG571 LYS572 ILE573 SER574 LYS575 TYR576 ALA577 PRO578 GLU579 GLU580 GLY581 ASN582 ARG583 TYR584 ASP585 GLY586 ILE587 TYR588 LYS589 VAL590 VAL591 LYS592 TYR593 TRP594 PRO595 GLU596 ILE597 SER598 SER599 SER600 HIS601 GLY602 PHE603 LEU604 VAL605 TRP606 ARG607 TYR608 LEU609 LEU610 ARG611 ARG612 ASP613 ASP614 VAL615 GLU616 PRO617 ALA618 PRO619 TRP620 THR621 SER622 GLU623 GLY624 ILE625 GLU626 ARG627 SER628 ARG629 ARG630 LEU631 CYS632 LEU633 ARG634 LEU635 GLN636 TYR637 PRO638 ALA639 GLY640 TYR641
Unit 6 VAL442 PRO443 SER444 ASN445 HIS446 TYR447 GLY448 PRO449 ILE450 PRO451 GLY452 ILE453 PRO454 VAL455 GLY456 SER457 THR458 TRP459 ARG460 PHE461 ARG462 VAL463 GLN464 VAL465 SER466 GLU467 ALA468 GLY469 VAL470 HIS471 ARG472 PRO473 HIS474 VAL475 GLY476 GLY477 ILE478 HIS479 GLY480 ARG481 SER482 ASN483 ASP484 GLY485 ALA486 TYR487 SER488 LEU489 VAL490 LEU491 ALA492 GLY493 GLY494 PHE495 ALA496 ASP497 GLU498 VAL499 ASP500 ARG501 GLY502 ASP503 GLU504 PHE505 THR506 TYR507 THR508 GLY509 SER510 GLY511 SER525 ALA526 ASP527 GLN528 THR529 LEU530 THR531 ASN532 MET533 ASN534 ARG535 ALA536 LEU537 ALA538 LEU539 ASN540 CYS541 ASP542 ALA543 PRO544 LEU545 ASP546 ASP547 LYS548 ILE549 GLY550 ALA551 GLU552 SER553 ARG554 ASN555 TRP556 ARG557 ALA558 GLY559 LYS560 PRO561 VAL562 ARG563 VAL564 ILE565 ARG566 SER567 PHE568 LYS569 GLY570 ARG571 LYS572 ILE573 SER574 LYS575 TYR576 ALA577 PRO578 GLU579 GLU580 GLY581 ASN582 ARG583 TYR584 ASP585 GLY586 ILE587 TYR588 LYS589 VAL590 VAL591 LYS592 TYR593 TRP594 PRO595 GLU596 ILE597 SER598 SER599 SER600 HIS601 GLY602 PHE603 LEU604 VAL605 TRP606 ARG607 TYR608 LEU609 LEU610 ARG611 ARG612 ASP613 ASP614 VAL615 GLU616 PRO617 ALA618 PRO619 TRP620 THR621 SER622 GLU623 GLY624 ILE625 GLU626 ARG627 SER628 ARG629 ARG630 LEU631 CYS632 LEU633 ARG634 LEU635 GLN636 TYR637 PRO638 ALA639 GLY640 TYR641
Other macromolecules
Unit 3 DC1 DT2 DG3 DG4 DT5 DC6 5HC7 DG8 DG9 DA10 DT11 DG12
Unit 4 DC2 DA3 DT4 DC5 DC6 DG7 DG8 DA9 DC10 DC11 DA12
Unit 7 DC1 DT2 DG3 DG4 DT5 DC6 5HC7 DG8 DG9 DA10 DT11 DG12
Unit 8 DC2 DA3 DT4 DC5 DC6 DG7 DG8 DA9 DC10 DC11 DA12
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany